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Gencode Genes

TAF5 (ENST00000369839.4) at chr10:103367976-103389065 - Homo sapiens TATA-box binding protein associated factor 5 (TAF5), transcript variant 2, mRNA. (from RefSeq NM_139052)
TADA3 (ENST00000301964.6) at chr3:9779860-9792747 - Homo sapiens transcriptional adaptor 3 (TADA3), transcript variant 1, mRNA. (from RefSeq NM_006354)
TADA3 (ENST00000440161.5) at chr3:9780256-9793011 - Homo sapiens transcriptional adaptor 3 (TADA3), transcript variant 3, mRNA. (from RefSeq NM_001278270)
TADA3 (ENST00000343450.2) at chr3:9783128-9792736 - Homo sapiens transcriptional adaptor 3 (TADA3), transcript variant 2, mRNA. (from RefSeq NM_133480)
TAF6L (ENST00000294168.8) at chr11:62771396-62787342 - Homo sapiens TATA-box binding protein associated factor 6 like (TAF6L), mRNA. (from RefSeq NM_006473)
TAF9B (ENST00000341864.6) at chrX:78129748-78139650 - Homo sapiens TATA-box binding protein associated factor 9b (TAF9B), mRNA. (from RefSeq NM_015975)
TAF5L (ENST00000258281.6) at chr1:229593121-229626047 - Homo sapiens TATA-box binding protein associated factor 5 like (TAF5L), transcript variant 1, mRNA. (from RefSeq NM_014409)
TAF5L (ENST00000477957.1) at chr1:229606834-229626038 - TATA-box binding protein associated factor 5 like (from HGNC TAF5L)
TAF5L (ENST00000366676.5) at chr1:229593111-229614482 - Functions as a component of the PCAF complex. The PCAF  complex is capable of efficiently acetylating histones in a  nucleosomal context. The PCAF complex could be considered as the  human version of the yeast SAGA complex. (from UniProt O75529)
TAF5L (ENST00000366675.3) at chr1:229599194-229625970 - Homo sapiens TATA-box binding protein associated factor 5 like (TAF5L), transcript variant 2, mRNA. (from RefSeq NM_001025247)
TAF5L (ENST00000366674.1) at chr1:229614157-229626047 - TATA-box binding protein associated factor 5 like (from HGNC TAF5L)
SUPT7L (ENST00000464789.2) at chr2:27653070-27663639 - Component of the STAGA transcription coactivator-HAT  complex, at least composed of SUPT3H, SUPT7L, GCN5L2, TAF5L,  TAF6L, TADA3L, TAD1L, TAF10, TAF12 and TAF9. (from UniProt O94864)
SUPT7L (ENST00000406540.5) at chr2:27653052-27663640 - Component of the STAGA transcription coactivator-HAT  complex, at least composed of SUPT3H, SUPT7L, GCN5L2, TAF5L,  TAF6L, TADA3L, TAD1L, TAF10, TAF12 and TAF9. (from UniProt O94864)
SUPT3H (ENST00000475057.5) at chr6:44809317-45377953 - Homo sapiens SPT3 homolog, SAGA and STAGA complex component (SUPT3H), non-coding RNA. (from RefSeq NR_146635)
SUPT3H (ENST00000371460.5) at chr6:44828732-45377933 - Homo sapiens SPT3 homolog, SAGA and STAGA complex component (SUPT3H), transcript variant 2, mRNA. (from RefSeq NM_181356)
SUPT3H (ENST00000371459.6) at chr6:44826726-45377934 - Homo sapiens SPT3 homolog, SAGA and STAGA complex component (SUPT3H), transcript variant 1, mRNA. (from RefSeq NM_003599)
SUPT7L (ENST00000405491.5) at chr2:27653063-27663639 - Homo sapiens SPT7 like, STAGA complex gamma subunit (SUPT7L), transcript variant 4, mRNA. (from RefSeq NM_001282731)
SUPT7L (ENST00000404798.6) at chr2:27650812-27663840 - Homo sapiens SPT7 like, STAGA complex gamma subunit (SUPT7L), transcript variant 5, mRNA. (from RefSeq NM_001282732)
SUPT7L (ENST00000337768.10) at chr2:27650809-27663614 - Homo sapiens SPT7 like, STAGA complex gamma subunit (SUPT7L), transcript variant 1, mRNA. (from RefSeq NM_014860)
ATXN7 (ENST00000487717.5) at chr3:63911929-64000207 - Acts as component of the STAGA transcription  coactivator-HAT complex. Mediates the interaction of STAGA complex  with the CRX and is involved in CRX-dependent gene activation.  Necessary for microtubule cytoskeleton stabilization. (from UniProt O15265)
ATXN7 (ENST00000522345.2) at chr3:63912588-63999559 - Acts as component of the STAGA transcription  coactivator-HAT complex. Mediates the interaction of STAGA complex  with the CRX and is involved in CRX-dependent gene activation.  Necessary for microtubule cytoskeleton stabilization. (from UniProt O15265)
TADA1 (ENST00000367874.5) at chr1:166856510-166876264 - Homo sapiens transcriptional adaptor 1 (TADA1), mRNA. (from RefSeq NM_053053)
TADA2A (ENST00000617828.4) at chr17_KI270857v1_alt:1646046-1717437 - Component of the ATAC complex, a complex with histone  acetyltransferase activity on histones H3 and H4. Required for the  function of some acidic activation domains, which activate  transcription from a distant site (By similarity). Binds double-  stranded DNA. Binds dinucleosomes, probably at the linker region  between neighboring nucleosomes. Plays a role in chromatin  remodeling. (from UniProt O75478)
TAF9 (ENST00000506736.1) at chr5:69364743-69366821 - Essential for cell viability. TAF9 and TAF9B are  involved in transcriptional activation as well as repression of  distinct but overlapping sets of genes. May have a role in gene  regulation associated with apoptosis. TAFs are components of the  transcription factor IID (TFIID) complex, the TBP-free TAFII  complex (TFTC), the PCAF histone acetylase complex and the STAGA  transcription coactivator-HAT complex. TFIID or TFTC are essential  for the regulation of RNA polymerase II-mediated transcription. (from UniProt Q16594)
TAF9 (ENST00000616867.1) at chr5_GL339449v2_alt:147938-150016 - Essential for cell viability. TAF9 and TAF9B are  involved in transcriptional activation as well as repression of  distinct but overlapping sets of genes. May have a role in gene  regulation associated with apoptosis. TAFs are components of the  transcription factor IID (TFIID) complex, the TBP-free TAFII  complex (TFTC), the PCAF histone acetylase complex and the STAGA  transcription coactivator-HAT complex. TFIID or TFTC are essential  for the regulation of RNA polymerase II-mediated transcription. (from UniProt Q16594)
TADA2A (ENST00000633584.1) at chr17_KI270857v1_alt:1646095-1704822 - Homo sapiens transcriptional adaptor 2A (TADA2A), transcript variant 2, mRNA. (from RefSeq NM_133439)
TADA2A (ENST00000633468.1) at chr17_KI270857v1_alt:1646030-1718900 - Homo sapiens transcriptional adaptor 2A (TADA2A), transcript variant 3, mRNA. (from RefSeq NM_001166105)
TADA2A (ENST00000622522.2) at chr17_KI270857v1_alt:1646376-1716398 - Homo sapiens transcriptional adaptor 2A (TADA2A), transcript variant 1, mRNA. (from RefSeq NM_001488)
KAT2A (ENST00000225916.10) at chr17:42113111-42121367 - Homo sapiens lysine acetyltransferase 2A (KAT2A), mRNA. (from RefSeq NM_021078)
TAF12 (ENST00000373824.8) at chr1:28602850-28643066 - Homo sapiens TATA-box binding protein associated factor 12 (TAF12), transcript variant 2, mRNA. (from RefSeq NM_005644)
TAF12 (ENST00000263974.4) at chr1:28603101-28643005 - Homo sapiens TATA-box binding protein associated factor 12 (TAF12), transcript variant 1, mRNA. (from RefSeq NM_001135218)
TRRAP (ENST00000355540.7) at chr7:98878490-99013243 - Homo sapiens transformation/transcription domain associated protein (TRRAP), transcript variant 2, mRNA. (from RefSeq NM_003496)
TRRAP (ENST00000359863.8) at chr7:98878490-99013243 - Homo sapiens transformation/transcription domain associated protein (TRRAP), transcript variant 1, mRNA. (from RefSeq NM_001244580)
ATXN7 (ENST00000538065.5) at chr3:63898399-64003453 - Homo sapiens ataxin 7 (ATXN7), transcript variant SCA7b, mRNA. (from RefSeq NM_001177387)
ATXN7 (ENST00000484332.1) at chr3:63967744-63999796 - Homo sapiens ataxin 7 (ATXN7), transcript variant SCA7c, mRNA. (from RefSeq NM_001128149)
ATXN7 (ENST00000295900.10) at chr3:63864560-64003462 - Homo sapiens ataxin 7 (ATXN7), transcript variant SCA7a, mRNA. (from RefSeq NM_000333)
TAF9 (ENST00000328663.8) at chr5:69364744-69370013 - Homo sapiens TATA-box binding protein associated factor 9 (TAF9), transcript variant 4, mRNA. (from RefSeq NM_001015892)
TAF9 (ENST00000615404.1) at chr5_GL339449v2_alt:147939-153209 - Homo sapiens TATA-box binding protein associated factor 9 (TAF9), transcript variant 4, mRNA. (from RefSeq NM_001015892)
TAF9 (ENST00000617893.4) at chr5_GL339449v2_alt:147940-152838 - Homo sapiens TATA-box binding protein associated factor 9 (TAF9), transcript variant 1, mRNA. (from RefSeq NM_003187)
TAF9 (ENST00000217893.10) at chr5:69364743-69369520 - Homo sapiens TATA-box binding protein associated factor 9 (TAF9), transcript variant 1, mRNA. (from RefSeq NM_003187)
TAF10 (ENST00000299424.9) at chr11:6606294-6612216 - Homo sapiens TATA-box binding protein associated factor 10 (TAF10), mRNA. (from RefSeq NM_006284)
TAF4 (ENST00000252996.8) at chr20:61974798-62065810 - Homo sapiens TATA-box binding protein associated factor 4 (TAF4), mRNA. (from RefSeq NM_003185)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_139052.2 at chr10:103367953-103389065
NM_006951.4 at chr10:103367953-103389065
NM_014409.3 at chr1:229593111-229626047
NM_001025247.1 at chr1:229599194-229626047

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011544164.2 at chr1:229593111-229607791
XM_011544162.1 at chr1:229593111-229610193
XM_005273100.2 at chr1:229593111-229625651
XM_017001045.1 at chr1:229593111-229625677
XM_005273099.4 at chr1:229593111-229625713
XM_011544163.1 at chr1:229593111-229626033

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

TAF5 at chr10:103367976-103389065

RefSeq Genes

TAF5 at chr10:103367976-103389065 - (NM_139052) transcription initiation factor TFIID subunit 5 isoform 2
TAF5 at chr10:103367976-103389065 - (NM_006951) transcription initiation factor TFIID subunit 5 isoform 1
TAF5L at chr1:229599194-229626122 - (NM_001025247) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform b
TAF5L at chr1:229593118-229626047 - (NM_014409) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform a

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

TAF5LP1 at chr17:35498054-35499177

Non-Human RefSeq Genes

taf5 at chr10:103368266-103388223 - (NM_001142114) transcription initiation factor TFIID subunit 5
Taf5 at chr10:103367968-103389054 - (NM_001106365) transcription initiation factor TFIID subunit 5
TAF5 at chr10:103368266-103388223 - (NM_001031235) transcription initiation factor TFIID subunit 5
TAF5 at chr10:103367978-103389058 - (NM_001191478) transcription initiation factor TFIID subunit 5
Taf5 at chr10:103367973-103389065 - (NM_177342) transcription initiation factor TFIID subunit 5
taf5 at chr10:103368260-103388223 - (NM_001037431) transcription initiation factor TFIID subunit 5
taf5.L at chr10:103368266-103388223 - (NM_001123361) transcription initiation factor TFIID subunit 5
taf5l.L at chr1:229594297-229614482 - (NM_001093220) TATA-box binding protein associated factor 5 like L homeolog
taf5l.S at chr1:229594297-229614482 - (NM_001096357) uncharacterized protein LOC734892
taf5l at chr1:229594297-229614482 - (NM_199852) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
Taf5l at chr1:229593119-229625911 - (NM_133966) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
Taf5l at chr1:229593119-229614487 - (NM_001357315) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
Taf5l at chr1:229593121-229614487 - (NM_001107442) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
taf5l at chr1:229594297-229614482 - (NM_001006778) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
TAF5L at chr1:229593786-229625938 - (NM_001257498) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TAF5 at chr10:103367976-103389065

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TAF5 at chr10:103367976-103389065

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TAF5 at chr10:103367967-103389065

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TAF5 at chr10:103367967-103389065

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TAF5 at chr10:103367967-103389065

Retroposed Genes V9, Including Pseudogenes

TAF5L_HUMAN at chr17:35498054-35510834 - (NM_001025247.1-5)
TAF5L at chr17:35498054-35510834 - (NM_001025247.1-5)
TAF5L at chr17:35498054-35510834 - (NM_001025247.1-5)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Taf5l_38762 at chr1:229593111-229626047
Taf5l_VG19432 at chr1:229593111-229626047
Taf5_32634 at chr10:103367967-103389065
Taf5_74533 at chr10:103367967-103389065
Taf5_76466 at chr10:103367967-103389065
Taf5_94036 at chr10:103367967-103389065

Human Aligned mRNA Search Results

BC136340 - Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa, mRNA (cDNA clone MGC:167950 IMAGE:9020327), complete cds.
BC052268 - Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa, mRNA (cDNA clone MGC:59660 IMAGE:6575596), complete cds.
BC136348 - Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa, mRNA (cDNA clone MGC:167958 IMAGE:9020335), complete cds.
BC041094 - Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone MGC:46101 IMAGE:5551246), complete cds.
AK291229 - Homo sapiens cDNA FLJ75683 complete cds, highly similar to Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA.
BC001569 - Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone IMAGE:3452477).

Non-Human Aligned mRNA Search Results

BC077313 - Xenopus laevis TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone MGC:80243 IMAGE:5048667), complete cds.
BC067651 - Danio rerio TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone IMAGE:6963216), partial cds.
JU333995 - TSA: Macaca mulatta Mamu_502408 mRNA sequence.
JU475181 - TSA: Macaca mulatta Mamu_369523 mRNA sequence.
JT414940 - TSA: Ictalurus punctatus aby_k45:660495 mRNA sequence.
JP019193 - TSA: Mustela putorius furo MPF81014437contig1/1 mRNA sequence.
JP019192 - TSA: Mustela putorius furo MPF81014436contig1/1 mRNA sequence.
BC156180 - Synthetic construct Mus musculus clone IMAGE:100061560, MGC:190245 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf5) mRNA, encodes complete protein.
BC107956 - Danio rerio TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone MGC:123129 IMAGE:3819198), complete cds.
BC129310 - Danio rerio TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone MGC:158587 IMAGE:7890742), complete cds.
CR761718 - Xenopus tropicalis finished cDNA, clone TGas086d19.
BC075582 - Xenopus tropicalis TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone MGC:89568 IMAGE:6993997), complete cds.
BC098861 - Rattus norvegicus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone IMAGE:7380415), partial cds.
BC160901 - Rattus norvegicus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone MGC:188626 IMAGE:7454090), complete cds.
BC013550 - Mus musculus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone MGC:19341 IMAGE:4222283), complete cds.
BC056820 - Danio rerio TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, mRNA (cDNA clone MGC:63765 IMAGE:2641473), complete cds.
MG133930 - Synthetic construct Xenopus tropicalis clone IMAGE:6993997 TATA-box binding protein associated factor 5 like (taf5l) gene, encodes complete protein.
JU327183 - TSA: Macaca mulatta Mamu_522484 mRNA sequence.
JU330638 - TSA: Macaca mulatta Mamu_529448 mRNA sequence.
JU331866 - TSA: Macaca mulatta Mamu_522149 mRNA sequence.
AB179107 - Macaca fascicularis testis cDNA clone: QtsA-12973, similar to human TAF5 RNA polymerase II, TATA box binding protein(TBP)-associated factor, 100kDa (TAF5), transcriptvariant 1, mRNA, RefSeq: NM_006951.2.
AK169453 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630019O06 product:TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, full insert sequence.
AK154832 - Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630108G12 product:TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, full insert sequence.