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Gencode Genes

TAF1B (ENST00000263663.10) at chr2:9843474-9934416 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit B (TAF1B), transcript variant 1, mRNA. (from RefSeq NM_005680)
TAF1B (ENST00000625239.2) at chr2:9843443-9846113 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8WDU0)
TAF1B (ENST00000497182.1) at chr2:9843519-9845820 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000492648.2) at chr2:9875998-9913709 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000490432.1) at chr2:9843723-9852114 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000480197.5) at chr2:9843703-9868376 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000469895.5) at chr2:9843585-9868416 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000434858.5) at chr2:9843525-9933946 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8WE32)
TAF1B (ENST00000416181.1) at chr2:9843527-9849407 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8WDU0)
TAF1B (ENST00000404869.7) at chr2:9843497-9852124 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1B (ENST00000402170.5) at chr2:9843482-9868764 - TATA-box binding protein associated factor, RNA polymerase I subunit B (from HGNC TAF1B)
TAF1D (ENST00000526015.5) at chr11:93730194-93741493 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit D (TAF1D), transcript variant 3, non-coding RNA. (from RefSeq NR_146091)
TAF1D (ENST00000448108.7) at chr11:93735567-93741495 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit D (TAF1D), transcript variant 1, mRNA. (from RefSeq NM_024116)
RRN3 (ENST00000616334.2) at chr16_KI270853v1_alt:575359-609658 - Homo sapiens RRN3 homolog, RNA polymerase I transcription factor (RRN3), transcript variant 1, mRNA. (from RefSeq NM_018427)
RRN3 (ENST00000198767.10) at chr16:15060022-15094317 - Homo sapiens RRN3 homolog, RNA polymerase I transcription factor (RRN3), transcript variant 1, mRNA. (from RefSeq NM_018427)
RRN3 (ENST00000327307.11) at chr16:15061629-15094008 - Required for efficient transcription initiation by RNA  polymerase I. Required for the formation of the competent  preinitiation complex (PIC). Dissociates from pol I as a  consequence of transcription. In vitro, cannot activate  transcription in a subsequent transcription reaction (By  similarity). (from UniProt Q9NYV6)
RRN3 (ENST00000634151.1) at chr16_KI270853v1_alt:575423-593239 - Required for efficient transcription initiation by RNA  polymerase I. Required for the formation of the competent  preinitiation complex (PIC). Dissociates from pol I as a  consequence of transcription. In vitro, cannot activate  transcription in a subsequent transcription reaction (By  similarity). (from UniProt Q9NYV6)
RRN3 (ENST00000632541.1) at chr16_KI270853v1_alt:575668-608051 - Required for efficient transcription initiation by RNA  polymerase I. Required for the formation of the competent  preinitiation complex (PIC). Dissociates from pol I as a  consequence of transcription. In vitro, cannot activate  transcription in a subsequent transcription reaction (By  similarity). (from UniProt Q9NYV6)
RRN3 (ENST00000564131.1) at chr16:15076435-15094253 - Required for efficient transcription initiation by RNA  polymerase I. Required for the formation of the competent  preinitiation complex (PIC). Dissociates from pol I as a  consequence of transcription. In vitro, cannot activate  transcription in a subsequent transcription reaction (By  similarity). (from UniProt Q9NYV6)
TAF1D (ENST00000323981.6) at chr11:93729948-93741494 - Component of the transcription factor SL1/TIF-IB  complex, which is involved in the assembly of the PIC  (preinitiation complex) during RNA polymerase I-dependent  transcription. The rate of PIC formation probably is primarily  dependent on the rate of association of SL1/TIF-IB with the rDNA  promoter. SL1/TIF-IB is involved in stabilization of nucleolar  transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB  excludes the association of TBP with TFIID subunits. (from UniProt Q9H5J8)
TAF1A (ENST00000350027.8) at chr1:222557902-222589933 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit A (TAF1A), transcript variant 3, mRNA. (from RefSeq NM_001201536)
TAF1A (ENST00000366890.5) at chr1:222557902-222589785 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit A (TAF1A), transcript variant 2, mRNA. (from RefSeq NM_139352)
TAF1A (ENST00000352967.9) at chr1:222558312-222589933 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit A (TAF1A), transcript variant 1, mRNA. (from RefSeq NM_005681)
FLNA (ENST00000360319.9) at chrX:154348529-154371283 - Promotes orthogonal branching of actin filaments and  links actin filaments to membrane glycoproteins. Anchors various  transmembrane proteins to the actin cytoskeleton and serves as a  scaffold for a wide range of cytoplasmic signaling proteins.  Interaction with FLNA may allow neuroblast migration from the  ventricular zone into the cortical plate. Tethers cell surface-  localized furin, modulates its rate of internalization and directs  its intracellular trafficking (By similarity). Involved in  ciliogenesis. (from UniProt P21333)
TAF1C (ENST00000541676.5) at chr16:84177847-84187070 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit C (TAF1C), transcript variant 7, mRNA. (from RefSeq NM_001243160)
TAF1C (ENST00000570117.5) at chr16:84178848-84187057 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit C (TAF1C), transcript variant 5, mRNA. (from RefSeq NM_001243158)
TAF1C (ENST00000566732.5) at chr16:84178712-84187039 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit C (TAF1C), transcript variant 3, mRNA. (from RefSeq NM_001243156)
TAF1C (ENST00000567759.5) at chr16:84177855-84187011 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit C (TAF1C), transcript variant 1, mRNA. (from RefSeq NM_005679)
TAF1C (ENST00000341690.10) at chr16:84177852-84187049 - Homo sapiens TATA-box binding protein associated factor, RNA polymerase I subunit C (TAF1C), transcript variant 2, mRNA. (from RefSeq NM_139353)
FLNA (ENST00000422373.5) at chrX:154348532-154374638 - Homo sapiens filamin A (FLNA), transcript variant 1, mRNA. (from RefSeq NM_001456)
FLNA (ENST00000369850.10) at chrX:154348531-154374634 - Homo sapiens filamin A (FLNA), transcript variant 2, mRNA. (from RefSeq NM_001110556)
TBP (ENST00000230354.10) at chr6:170554379-170572870 - General transcription factor that functions at the core  of the DNA-binding multiprotein factor TFIID. Binding of TFIID to  the TATA box is the initial transcriptional step of the pre-  initiation complex (PIC), playing a role in the activation of  eukaryotic genes transcribed by RNA polymerase II. Component of  the transcription factor SL1/TIF-IB complex, which is involved in  the assembly of the PIC (preinitiation complex) during RNA  polymerase I-dependent transcription. The rate of PIC formation  probably is primarily dependent on the rate of association of SL1  with the rDNA promoter. SL1 is involved in stabilization of  nucleolar transcription factor 1/UBTF on rDNA. (from UniProt P20226)
TBP (ENST00000540980.5) at chr6:170554333-170572869 - Homo sapiens TATA-box binding protein (TBP), transcript variant 2, mRNA. (from RefSeq NM_001172085)
TBP (ENST00000392092.7) at chr6:170554369-170572859 - Homo sapiens TATA-box binding protein (TBP), transcript variant 1, mRNA. (from RefSeq NM_003194)
SIRT1 (ENST00000212015.11) at chr10:67884656-67918390 - Homo sapiens sirtuin 1 (SIRT1), transcript variant 1, mRNA. (from RefSeq NM_012238)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001318977.1 at chr2:9843442-9934416
NM_005680.2 at chr2:9843442-9934416
NM_001318976.1 at chr2:9843442-9934416

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011510411.1 at chr2:9843523-9934391
XM_024453209.1 at chr2:9843559-9934391
XM_011510410.2 at chr2:9844419-9934391

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

TAF1B at chr2:9843474-9934416

RefSeq Genes

TAF1B at chr2:9843442-9934416 - (NM_001318976) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform b
TAF1B at chr2:9843442-9934416 - (NM_001318977) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform b
TAF1B at chr2:9843474-9934416 - (NM_005680) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform a

Non-Human RefSeq Genes

TAF1B at chr2:9843483-9934234 - (NM_001285372) TATA box-binding protein-associated factor RNA polymerase I subunit B
Taf1b at chr2:9845225-9933993 - (NR_028341) 
TAF1B at chr2:9845226-9933963 - (NM_001006416) TATA box-binding protein-associated factor RNA polymerase I subunit B
Taf1b at chr2:9845235-9933988 - (NM_001191107) TATA box-binding protein-associated factor RNA polymerase I subunit B
Taf1b at chr2:9845225-9933993 - (NM_020614) TATA box-binding protein-associated factor RNA polymerase I subunit B
TAF1B at chr2:9845222-9933957 - (NM_001075503) TATA box-binding protein-associated factor RNA polymerase I subunit B
taf1b.L at chr2:9851540-9919737 - (NM_001085985) TATA box-binding protein-associated factor RNA polymerase I subunit B

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843474-9934416

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843474-9934416
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843443-9846113
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TAF1B at chr2:9843354-9934416

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TAF1B at chr2:9843354-9934416
TAF1B at chr2:9843482-9868764
TAF1B at chr2:9843497-9852124
TAF1B at chr2:9843519-9845820
TAF1B at chr2:9843525-9933946
TAF1B at chr2:9843527-9849407
TAF1B at chr2:9843585-9868416
TAF1B at chr2:9843703-9868376
TAF1B at chr2:9843723-9852114
TAF1B at chr2:9875998-9913709

International Knockout Mouse Consortium Genes Mapped to Human Genome

Taf1b_45410 at chr2:9843442-9934416
Taf1b_79643 at chr2:9843442-9934416

BC018137 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2289   99.7%          2     +   9843444   9934408  BC018137     1  2290  2307

Non-Human Aligned mRNA Search Results

BC069907 - Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B, mRNA (cDNA clone MGC:78144 IMAGE:4951630), complete cds.
BC094035 - Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B, mRNA (cDNA clone MGC:102435 IMAGE:5029813), complete cds.
BC057167 - Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B, mRNA (cDNA clone MGC:67993 IMAGE:4954753), complete cds.
BC125027 - Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B, mRNA (cDNA clone MGC:141445 IMAGE:40061781), complete cds.
BC125028 - Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B, mRNA (cDNA clone MGC:141446 IMAGE:40061782), complete cds.
AJ277993 - Sus scrofa partial TAF1B gene for TATA box binding protein (TBP) associated factor.
BC116032 - Bos taurus TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa, mRNA (cDNA clone MGC:139058 IMAGE:8095629), complete cds.
JU322669 - TSA: Macaca mulatta Mamu_509251 mRNA sequence.
AB169333 - Macaca fascicularis testis cDNA, clone: QtsA-19105, similar to human TATA box binding protein (TBP)-associated factor, RNApolymerase I, B, 63kDa (TAF1B), mRNA, RefSeq: NM_005680.1.