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UCSC Genes

SYCE1 (uc001lno.2) at chr10:135368348-135379138 - Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 4, mRNA.
SYCE1 (uc031pxt.1) at chr10:135372864-135379138 - Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 4, mRNA.
SYCE1 (uc009ybn.2) at chr10:135367404-135379138 - Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 3, mRNA.
SYCE1 (uc001lnn.2) at chr10:135367404-135382876 - Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 1, mRNA.
SYCE1 (uc001lnm.2) at chr10:135367404-135373598 - Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 1, mRNA.
DPPA2 (uc003dxo.3) at chr3:109012635-109035364 - Homo sapiens developmental pluripotency associated 2 (DPPA2), mRNA.
SYCP1 (uc001efr.3) at chr1:115397455-115537990 - Homo sapiens synaptonemal complex protein 1 (SYCP1), mRNA.
SYCP1 (uc009wgw.3) at chr1:115397455-115537990 - Homo sapiens synaptonemal complex protein 1 (SYCP1), mRNA.
SYCP1 (uc001efq.3) at chr1:115397455-115537990 - Homo sapiens synaptonemal complex protein 1 (SYCP1), mRNA.
SYCE2 (uc002mvr.2) at chr19:13009894-13030086 - Homo sapiens synaptonemal complex central element protein 2 (SYCE2), mRNA.
SYCE3 (uc010hbe.3) at chr22:50989541-51001328 - Homo sapiens synaptonemal complex central element protein 3 (SYCE3), mRNA.
SYCE3 (uc003bmj.4) at chr22:50989541-50994861 - Homo sapiens synaptonemal complex central element protein 3 (SYCE3), mRNA.
SYCE1L (uc010vnh.1) at chr16:77233349-77246976 - Homo sapiens synaptonemal complex central element protein 1-like (SYCE1L), mRNA.
SYCE1L (uc002ffb.3) at chr16:77246172-77246976 - Homo sapiens synaptonemal complex central element protein 1-like (SYCE1L), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001143763.1 at chr10:135367404-135379138
NM_130784.3 at chr10:135367404-135381779
NM_001129979.1 at chr16:77233349-77246976

RefSeq Genes

SYCE1 at chr10:135368351-135379087 - (NM_001143764) synaptonemal complex central element protein 1 isoform 4
SYCE1 at chr10:135367404-135381779 - (NM_130784) synaptonemal complex central element protein 1 isoform 1
SYCE1 at chr10:135367404-135379138 - (NM_001143763) synaptonemal complex central element protein 1 isoform 3
SYCE1L at chr16:77233305-77247112 - (NM_001129979) synaptonemal complex central element protein 1-like isoform 1
SYCE1L at chr16:77233305-77247112 - (NM_001348924) synaptonemal complex central element protein 1-like isoform 2

Non-Human RefSeq Genes

SYCE1 at chr10:135368353-135379136 - (NM_001280134) synaptonemal complex central element protein 1
SYCE1 at chr10:135368350-135379127 - (NM_001283833) synaptonemal complex central element protein 1
Syce1 at chr10:135368909-135373658 - (NM_001143765) synaptonemal complex central element protein 1
Syce1 at chr10:135368873-135373646 - (NM_001025058) synaptonemal complex central element protein 1
SYCE1 at chr10:135368861-135373658 - (NM_001038149) synaptonemal complex central element protein 1
Syce1l at chr16:77242105-77246055 - (NM_001048145) synaptonemal complex central element protein 1-like isoform 1
Syce1l at chr16:77242105-77246055 - (NM_029139) synaptonemal complex central element protein 1-like isoform 2
Syce1l at chr16:77242105-77246055 - (NM_001286494) synaptonemal complex central element protein 1-like isoform 3

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368494-135379088
SYCE1 at chr10:135381302-135383339

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368348-135379138
SYCE1 at chr10:135381302-135383339

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368348-135379138
SYCE1 at chr10:135381302-135383339

Basic Gene Annotation Set from GENCODE Version 19

SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138

Comprehensive Gene Annotation Set from GENCODE Version 19

SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368348-135379138

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135379087
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135367794-135379087
SYCE1 at chr10:135368348-135379138

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

SYCE1 at chr10:135367404-135379138
SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135373600
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

SYCE1 at chr10:135367404-135379138
SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135373600
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138
SYCE1 at chr10:135370263-135379087
SYCE1 at chr10:135373120-135379087

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

SYCE1 at chr10:135367404-135379138
SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135373600
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

SYCE1 at chr10:135367404-135379138
SYCE1 at chr10:135367404-135382876
SYCE1 at chr10:135367405-135373600
SYCE1 at chr10:135367405-135381795
SYCE1 at chr10:135368348-135379138
SYCE1 at chr10:135370263-135379087
SYCE1 at chr10:135373120-135379087

International Knockout Mouse Consortium Genes Mapped to Human Genome

Syce1l_48115 at chr16:77233349-77246976
Syce1l_49532 at chr16:77233349-77246976
Syce1l_79928 at chr16:77233349-77246976
Syce1l_82213 at chr16:77233349-77246976
Syce1l_VG16142 at chr16:77233349-77246976
Syce1_44963 at chr10:135367404-135382876
Syce1_70778 at chr10:135367404-135382876
Syce1_94261 at chr10:135367404-135382876

BC034821 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1113   99.7%         10     - 135368494 135379088  BC034821     1  1113  1204

BC109528 Alignments in Non-Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
  559   87.3%         10     +- 135368861 135373658  BC109528    91   927  1096

Ensembl Genes

SYCE1L at chr16:77246305-77247112 - (ENST00000568925)
SYCE1 at chr10:135368348-135379138 - (ENST00000343131)
SYCE1 at chr10:135367405-135379087 - (ENST00000479535)
SYCE1 at chr10:135367404-135382876 - (ENST00000432597)
SYCE1 at chr10:135367405-135381795 - (ENST00000368517)
SYCE1 at chr10:135367794-135379087 - (ENST00000303903)
SYCE1L at chr16:77233294-77246902 - (ENST00000378644)
SYCE1L at chr16:77246490-77246902 - (ENST00000563157)

Vega Protein-Coding Annotations

OTTHUMT00000051158 at chr10:135367405-135373600
OTTHUMT00000051157 at chr10:135367405-135381795
OTTHUMT00000051160 at chr10:135370263-135379087
OTTHUMT00000051159 at chr10:135373120-135379087

Pfam Domains in UCSC Genes

SYCE1 at chr10:135369486-135372862
SYCE1 at chr16:77242109-77246095