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Gencode Genes

SNAP47-AS1 (ENST00000413347.2) at chr1:227743831-227747191 - SNAP47 antisense RNA 1 (from HGNC SNAP47-AS1)
SNAP47 (ENST00000315781.9) at chr1:227734996-227781231 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 10, non-coding RNA. (from RefSeq NR_136656)
SNAP47 (ENST00000617596.4) at chr1:227735453-227781226 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 3, mRNA. (from RefSeq NM_001323931)
SNAP47 (ENST00000606873.1) at chr1:227748063-227759652 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000491439.1) at chr1:227728707-227759485 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000480897.5) at chr1:227728539-227734352 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000480265.1) at chr1:227728549-227734352 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000478768.2) at chr1:227748154-227770744 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000475930.1) at chr1:227728618-227748186 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000470038.1) at chr1:227736173-227748115 - synaptosome associated protein 47 (from HGNC SNAP47)
SNAP47 (ENST00000426344.5) at chr1:227735436-227776969 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 7, mRNA. (from RefSeq NM_001323935)
SNAP47 (ENST00000418653.5) at chr1:227735431-227776970 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 11, non-coding RNA. (from RefSeq NR_136657)
SNAP47 (ENST00000366760.5) at chr1:227728657-227781226 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 8, non-coding RNA. (from RefSeq NR_136654)
SNAP47 (ENST00000366759.8) at chr1:227734996-227781226 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 6, mRNA. (from RefSeq NM_001323934)
BLOC1S6 (ENST00000220531.8) at chr15:45587379-45609716 - Homo sapiens biogenesis of lysosomal organelles complex 1 subunit 6 (BLOC1S6), transcript variant 4, non-coding RNA. (from RefSeq NR_132351)
BLOC1S6 (ENST00000567523.5) at chr15:45587379-45607773 - Component of the BLOC-1 complex, a complex that is  required for normal biogenesis of lysosome-related organelles  (LRO), such as platelet dense granules and melanosomes. In concert  with the AP-3 complex, the BLOC-1 complex is required to target  membrane protein cargos into vesicles assembled at cell bodies for  delivery into neurites and nerve terminals. The BLOC-1 complex, in  association with SNARE proteins, is also proposed to be involved  in neurite extension. May play a role in intracellular vesicle  trafficking, particularly in the vesicle-docking and fusion  process. (from UniProt Q9UL45)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001323933.1 at chr1:227728168-227781231
NR_136654.1 at chr1:227728518-227781231
NM_001323930.1 at chr1:227728518-227781231
NM_001323932.1 at chr1:227728518-227781231
NR_136657.1 at chr1:227734996-227776970
NM_001323935.1 at chr1:227734996-227776970
NR_136656.1 at chr1:227734996-227781231
NM_053052.3 at chr1:227734996-227781231
NR_136655.1 at chr1:227734996-227781231
NM_001323931.1 at chr1:227734996-227781231
NM_001323934.1 at chr1:227735695-227781231

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017000232.1 at chr1:227728549-227781228
XM_017000231.2 at chr1:227728630-227781228
XM_006711734.3 at chr1:227736178-227781226

RefSeq Genes

SNAP47 at chr1:227728518-227781231 - (NR_136654) 
SNAP47 at chr1:227735435-227776970 - (NR_136657) 
SNAP47 at chr1:227734996-227781231 - (NM_053052) synaptosomal-associated protein 47 isoform a
SNAP47 at chr1:227734996-227776970 - (NM_001323935) synaptosomal-associated protein 47 isoform c
SNAP47 at chr1:227734996-227781231 - (NM_001323931) synaptosomal-associated protein 47 isoform b
SNAP47 at chr1:227728518-227781231 - (NM_001323930) synaptosomal-associated protein 47 isoform b
SNAP47 at chr1:227728518-227781231 - (NM_001323932) synaptosomal-associated protein 47 isoform b
SNAP47 at chr1:227728168-227781231 - (NM_001323933) synaptosomal-associated protein 47 isoform b
SNAP47 at chr1:227735695-227781231 - (NM_001323934) synaptosomal-associated protein 47 isoform b
SNAP47 at chr1:227734996-227781231 - (NR_136656) 
SNAP47 at chr1:227734996-227781231 - (NR_136655) 

Non-Human RefSeq Genes

SNAP47 at chr1:227747734-227780673 - (NM_001102320) synaptosomal-associated protein 47
Snap47 at chr1:227747719-227780673 - (NM_199389) synaptosomal-associated protein 47
Snap47 at chr1:227747725-227759461 - (NM_001356452) synaptosomal-associated protein 47 isoform 1
Snap47 at chr1:227747725-227759461 - (NM_001356454) synaptosomal-associated protein 47 isoform 2
Snap47 at chr1:227747725-227759461 - (NM_144521) synaptosomal-associated protein 47 isoform 1
snap47 at chr1:227748091-227780598 - (NM_001045437) synaptosomal-associated protein 47
snap47.L at chr1:227747863-227759454 - (NM_001097751) synaptosome associated protein 47kDa L homeolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735453-227781226

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SNAP47 at chr1:227728539-227734352
SNAP47 at chr1:227728549-227734352
SNAP47 at chr1:227728618-227748186
SNAP47 at chr1:227728657-227781226
SNAP47 at chr1:227728707-227759485
SNAP47 at chr1:227734996-227781226
SNAP47 at chr1:227734996-227781231
SNAP47 at chr1:227735431-227776970
SNAP47 at chr1:227735436-227776969
SNAP47 at chr1:227735453-227781226
SNAP47 at chr1:227736173-227748115
SNAP47 at chr1:227748063-227759652
SNAP47 at chr1:227748154-227770744

International Knockout Mouse Consortium Genes Mapped to Human Genome

Snap47_26049 at chr1:227734996-227781231
Snap47_VG17686 at chr1:227734996-227781231

Human Aligned mRNA Search Results

BC001332 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3459631), partial cds.
BC004418 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3659680), partial cds.
BC007786 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3139971), partial cds.
BC011145 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3451454), partial cds.
BC014059 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3936239), partial cds.
BC025231 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:4139762), partial cds.
BC018760 - Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone MGC:31978 IMAGE:4300396), complete cds.

Human Unaligned mRNA Search Results

NR_136654 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 8, non-coding RNA.
NR_136657 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 11, non-coding RNA.
NR_136656 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 10, non-coding RNA.
NR_136655 - Homo sapiens synaptosome associated protein 47 (SNAP47), transcript variant 9, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC149093 - Bos taurus synaptosomal-associated protein, 47kDa, mRNA (cDNA clone MGC:151654 IMAGE:8225316), complete cds.
BC023182 - Mus musculus synaptosomal-associated protein, 47, mRNA (cDNA clone MGC:37030 IMAGE:4949809), complete cds.
BC029025 - Mus musculus synaptosomal-associated protein, 47, mRNA (cDNA clone MGC:32377 IMAGE:5036036), complete cds.
BC062056 - Rattus norvegicus synaptosomal-associated protein, 47, mRNA (cDNA clone MGC:72593 IMAGE:5598911), complete cds.
JU325109 - TSA: Macaca mulatta Mamu_523637 mRNA sequence.