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UCSC Genes

SMPDL3A (uc003pzg.3) at chr6:123109971-123130864 - Homo sapiens sphingomyelin phosphodiesterase, acid-like 3A (SMPDL3A), mRNA.
SMPDL3A (uc003pzh.3) at chr6:123109971-123130864 - Homo sapiens sphingomyelin phosphodiesterase, acid-like 3A (SMPDL3A), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001286138.1 at chr6:123110194-123130865
NM_006714.4 at chr6:123110194-123130865

RefSeq Genes

SMPDL3A at chr6:123110194-123130864 - (NM_001286138) acid sphingomyelinase-like phosphodiesterase 3a isoform b
SMPDL3A at chr6:123110403-123130864 - (NM_006714) acid sphingomyelinase-like phosphodiesterase 3a isoform a precursor

Non-Human RefSeq Genes

smpdl3a at chr6:123116821-123130376 - (NM_001030447) acid sphingomyelinase-like phosphodiesterase 3a precursor
SMPDL3A at chr6:123110492-123130852 - (NM_001035019) acid sphingomyelinase-like phosphodiesterase 3a precursor
Smpdl3a at chr6:123110487-123132263 - (NM_001005539) acid sphingomyelinase-like phosphodiesterase 3a precursor
Smpdl3a at chr6:123116821-123130848 - (NM_020561) acid sphingomyelinase-like phosphodiesterase 3a precursor
smpdl3a at chr6:123116827-123130367 - (NM_001014338) acid sphingomyelinase-like phosphodiesterase 3a precursor

Basic Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110403-123130865

Comprehensive Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110403-123130865
SMPDL3A at chr6:123110437-123118490

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110403-123130865

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110403-123130865
SMPDL3A at chr6:123110437-123118490

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SMPDL3A at chr6:123110194-123130862
SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490

Basic Gene Annotation Set from GENCODE Version 19

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Comprehensive Gene Annotation Set from GENCODE Version 19

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

SMPDL3A at chr6:123110315-123130865
SMPDL3A at chr6:123110437-123118490
SMPDL3A at chr6:123110471-123130862

International Knockout Mouse Consortium Genes Mapped to Human Genome

Smpdl3a_28325 at chr6:123109971-123130865
Smpdl3a_28326 at chr6:123109971-123130865
Smpdl3a_28327 at chr6:123109971-123130865
Smpdl3a_28328 at chr6:123109971-123130865
Smpdl3a_28329 at chr6:123109971-123130865

Alias of STS Marker

SMPDL3A at chr6:123016854-123216960 - (SMPDL3A)

BC018999 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1740  100.0%          6     + 123110424 123130864  BC018999     1  1740  1759

Non-Human Aligned mRNA Search Results

BC091078 - Xenopus tropicalis smpdl3a protein, mRNA (cDNA clone MGC:108398 IMAGE:7024261), complete cds.
MG134940 - Synthetic construct Xenopus tropicalis clone IMAGE:7024261 sphingomyelin phosphodiesterase acid-like 3A (smpdl3a) gene, encodes complete protein.
BC082029 - Rattus norvegicus sphingomyelin phosphodiesterase, acid-like 3A, mRNA (cDNA clone MGC:95161 IMAGE:7130096), complete cds.
BC139288 - Mus musculus sphingomyelin phosphodiesterase, acid-like 3A, mRNA (cDNA clone MGC:170915 IMAGE:8862310), complete cds.
BC139289 - Mus musculus sphingomyelin phosphodiesterase, acid-like 3A, mRNA (cDNA clone MGC:170916 IMAGE:8862311), complete cds.
BC102796 - Bos taurus sphingomyelin phosphodiesterase, acid-like 3A, mRNA (cDNA clone MGC:126943 IMAGE:7928819), complete cds.
JT405644 - TSA: Ictalurus punctatus clc_263849 mRNA sequence.
AB174099 - Macaca fascicularis brain cDNA clone: QmoA-12278, similar to human sphingomyelin phosphodiesterase, acid-like 3A (SMPDL3A), mRNA, RefSeq: NM_006714.2.

Ensembl Genes

SMPDL3A at chr6:123110437-123118490 - (ENST00000487215)
SMPDL3A at chr6:123110315-123130865 - (ENST00000368440)
SMPDL3A at chr6:123110471-123130862 - (ENST00000539041)

Vega Protein-Coding Annotations

OTTHUMT00000042039 at chr6:123110315-123130865
OTTHUMT00000042040 at chr6:123110437-123118490