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Gencode Genes

SMARCB1 (ENST00000644036.1) at chr22:23786946-23838008 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 1, mRNA. (from RefSeq NM_003073)
SMARCB1 (ENST00000629690.2) at chr22_KI270879v1_alt:23325-70878 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 4, mRNA. (from RefSeq NM_001362877)
SMARCB1 (ENST00000647057.1) at chr22:23786983-23834505 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000646911.1) at chr22:23787258-23826248 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000646723.1) at chr22:23787182-23834270 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000646421.1) at chr22:23786978-23802275 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000645799.1) at chr22:23823108-23834353 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000644619.1) at chr22:23787001-23816927 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000644467.1) at chr22:23802001-23818669 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000644462.1) at chr22:23791801-23834358 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000643421.1) at chr22:23787202-23804383 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000642727.1) at chr22:23801299-23803629 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000642275.1) at chr22:23802547-23818580 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000635578.1) at chr22:23791811-23803322 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000634926.1) at chr22:23791811-23803322 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000491967.2) at chr22:23786980-23802060 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000477836.2) at chr22:23814991-23833587 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000417137.6) at chr22:23787027-23816833 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt C9JTA6)
SMARCB1 (ENST00000407422.8) at chr22:23786931-23834540 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 2, mRNA. (from RefSeq NM_001007468)
SMARCB1 (ENST00000407082.4) at chr22:23787017-23803401 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt B5MCL5)
SMARCB1 (ENST00000344921.11) at chr22:23786963-23834505 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 4, mRNA. (from RefSeq NM_001362877)
SMARCB1 (ENST00000263121.12) at chr22:23787011-23834501 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000631333.2) at chr22_KI270879v1_alt:23356-70878 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 2, mRNA. (from RefSeq NM_001007468)
SMARCB1 (ENST00000630853.1) at chr22_KI270879v1_alt:23373-70545 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000629656.2) at chr22_KI270879v1_alt:23325-39784 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000626269.1) at chr22_KI270879v1_alt:52731-61678 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000625965.1) at chr22_KI270879v1_alt:29963-37822 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (from HGNC SMARCB1)
SMARCB1 (ENST00000618915.3) at chr22_KI270879v1_alt:23336-70878 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 1, mRNA. (from RefSeq NM_003073)
PBRM1 (ENST00000412587.5) at chr3:52547990-52679714 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Acts as a negative regulator of cell proliferation. (from UniProt Q86U86)
PBRM1 (ENST00000410007.5) at chr3:52547991-52679714 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Acts as a negative regulator of cell proliferation. (from UniProt Q86U86)
PBRM1 (ENST00000409114.7) at chr3:52548010-52679714 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Acts as a negative regulator of cell proliferation. (from UniProt Q86U86)
PBRM1 (ENST00000356770.8) at chr3:52545352-52679714 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Acts as a negative regulator of cell proliferation. (from UniProt Q86U86)
MAEL (ENST00000367870.6) at chr1:166989089-167022210 - Homo sapiens maelstrom spermatogenic transposon silencer (MAEL), transcript variant 2, mRNA. (from RefSeq NM_001286377)
MAEL (ENST00000367872.9) at chr1:166989280-167022214 - Homo sapiens maelstrom spermatogenic transposon silencer (MAEL), transcript variant 1, mRNA. (from RefSeq NM_032858)
PBRM1 (ENST00000337303.8) at chr3:52547990-52679714 - Homo sapiens polybromo 1 (PBRM1), transcript variant 4, mRNA. (from RefSeq NM_181042)
PBRM1 (ENST00000409057.5) at chr3:52547991-52679714 - Homo sapiens polybromo 1 (PBRM1), transcript variant 6, mRNA. (from RefSeq NM_001350075)
PBRM1 (ENST00000394830.7) at chr3:52547841-52685836 - Homo sapiens polybromo 1 (PBRM1), transcript variant 2, mRNA. (from RefSeq NM_018313)
ARID2 (ENST00000334344.11) at chr12:45729706-45908037 - Homo sapiens AT-rich interaction domain 2 (ARID2), transcript variant 1, mRNA. (from RefSeq NM_152641)
PBRM1 (ENST00000409767.5) at chr3:52548011-52679714 - Homo sapiens polybromo 1 (PBRM1), transcript variant 17, mRNA. (from RefSeq NM_001366076)
PBRM1 (ENST00000296302.11) at chr3:52547990-52679713 - Homo sapiens polybromo 1 (PBRM1), transcript variant 12, mRNA. (from RefSeq NM_001366071)
DPF1 (ENST00000412732.5) at chr19:38211009-38229677 - Homo sapiens double PHD fingers 1 (DPF1), transcript variant 3, mRNA. (from RefSeq NM_001135156)
DPF1 (ENST00000355526.8) at chr19:38211703-38224250 - Homo sapiens double PHD fingers 1 (DPF1), transcript variant 4, mRNA. (from RefSeq NM_001289978)
DPF1 (ENST00000420980.6) at chr19:38211006-38224250 - Homo sapiens double PHD fingers 1 (DPF1), transcript variant 2, mRNA. (from RefSeq NM_004647)
SMARCD2 (ENST00000323347.14) at chr17:63832502-63838728 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (SMARCD2), transcript variant 3, mRNA. (from RefSeq NM_001330440)
PPP1R15A (ENST00000200453.6) at chr19:48872421-48876058 - Homo sapiens protein phosphatase 1 regulatory subunit 15A (PPP1R15A), mRNA. (from RefSeq NM_014330)
SMARCD2 (ENST00000448276.7) at chr17:63832081-63842685 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (SMARCD2), transcript variant 1, mRNA. (from RefSeq NM_001098426)
TOP2B (ENST00000264331.8) at chr3:25597905-25664372 - Homo sapiens DNA topoisomerase II beta (TOP2B), transcript variant 1, mRNA. (from RefSeq NM_001330700)
TOP2B (ENST00000435706.6) at chr3:25597986-25664499 - Homo sapiens DNA topoisomerase II beta (TOP2B), transcript variant 2, mRNA. (from RefSeq NM_001068)
PHF10 (ENST00000366780.8) at chr6:169703905-169723931 - Homo sapiens PHD finger protein 10 (PHF10), transcript variant 2, mRNA. (from RefSeq NM_133325)
PHF10 (ENST00000339209.9) at chr6:169703902-169724500 - Homo sapiens PHD finger protein 10 (PHF10), transcript variant 1, mRNA. (from RefSeq NM_018288)
DPF3 (ENST00000614862.4) at chr14:72661043-72894116 - Homo sapiens double PHD fingers 3 (DPF3), transcript variant 3, mRNA. (from RefSeq NM_001280543)
DPF3 (ENST00000541685.5) at chr14:72661043-72894116 - Homo sapiens double PHD fingers 3 (DPF3), transcript variant 1, mRNA. (from RefSeq NM_012074)
DPF3 (ENST00000556509.5) at chr14:72619296-72894088 - Homo sapiens double PHD fingers 3 (DPF3), transcript variant 2, mRNA. (from RefSeq NM_001280542)
YEATS4 (ENST00000247843.7) at chr12:69359743-69390870 - Homo sapiens YEATS domain containing 4 (YEATS4), transcript variant 1, mRNA. (from RefSeq NM_006530)
ARID1B (ENST00000647938.1) at chr6:156777930-157210777 - Homo sapiens AT-rich interaction domain 1B (ARID1B), transcript variant 2, mRNA. (from RefSeq NM_020732)
ARID1B (ENST00000636930.1) at chr6:156777930-157209267 - Homo sapiens AT-rich interaction domain 1B (ARID1B), transcript variant 3, mRNA. (from RefSeq NM_001346813)
SMARCD3 (ENST00000392811.6) at chr7:151238973-151277452 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (SMARCD3), transcript variant 2, mRNA. (from RefSeq NM_003078)
SMARCD3 (ENST00000356800.6) at chr7:151238976-151276734 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (SMARCD3), transcript variant 1, mRNA. (from RefSeq NM_001003802)
SMARCD3 (ENST00000262188.12) at chr7:151238973-151248973 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (SMARCD3), transcript variant 3, mRNA. (from RefSeq NM_001003801)
ARID1B (ENST00000350026.10) at chr6:156777930-157209142 - Homo sapiens AT-rich interaction domain 1B (ARID1B), transcript variant 1, mRNA. (from RefSeq NM_017519)
DPF1 (ENST00000414789.5) at chr19:38211702-38223298 - May have an important role in developing neurons by  participating in regulation of cell survival, possibly as a  neurospecific transcription factor. Belongs to the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). (from UniProt Q92782)
SMARCA2 (ENST00000382203.5) at chr9:2021945-2193624 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 3, mRNA. (from RefSeq NM_001289396)
SMARCA2 (ENST00000349721.8) at chr9:2015347-2193620 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 1, mRNA. (from RefSeq NM_003070)
SMARCA2 (ENST00000357248.8) at chr9:2015186-2193620 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 2, mRNA. (from RefSeq NM_139045)
ACTL6B (ENST00000160382.10) at chr7:100643097-100656448 - Homo sapiens actin like 6B (ACTL6B), transcript variant 2, non-coding RNA. (from RefSeq NR_134539)
SMARCD1 (ENST00000381513.8) at chr12:50085200-50100642 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript variant 2, mRNA. (from RefSeq NM_139071)
SMARCD1 (ENST00000394963.9) at chr12:50085342-50100707 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript variant 1, mRNA. (from RefSeq NM_003076)
CHAF1A (ENST00000301280.10) at chr19:4402640-4443397 - Homo sapiens chromatin assembly factor 1 subunit A (CHAF1A), mRNA. (from RefSeq NM_005483)
SMARCC2 (ENST00000267064.8) at chr12:56163345-56189548 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 (SMARCC2), transcript variant 1, mRNA. (from RefSeq NM_003075)
SMARCC2 (ENST00000394023.7) at chr12:56162983-56189567 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 (SMARCC2), transcript variant 3, mRNA. (from RefSeq NM_001130420)
SMARCC2 (ENST00000347471.8) at chr12:56163330-56189548 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 (SMARCC2), transcript variant 2, mRNA. (from RefSeq NM_139067)
ARID1B (ENST00000637810.1) at chr6:157084772-157208361 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Binds DNA non-specifically. (from UniProt Q8NFD5)
BAZ1B (ENST00000339594.9) at chr7:73440406-73522293 - Homo sapiens bromodomain adjacent to zinc finger domain 1B (BAZ1B), transcript variant 2, mRNA. (from RefSeq NM_032408)
SUPT16H (ENST00000216297.7) at chr14:21351476-21384019 - Homo sapiens SPT16 homolog, facilitates chromatin remodeling subunit (SUPT16H), mRNA. (from RefSeq NM_007192)
SMARCC1 (ENST00000254480.10) at chr3:47585269-47781893 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 (SMARCC1), mRNA. (from RefSeq NM_003074)
SMARCA2 (ENST00000382194.6) at chr9:2017412-2193577 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation. Also  involved in vitamin D-coupled transcription regulation via its  association with the WINAC complex, a chromatin-remodeling complex  recruited by vitamin D receptor (VDR), which is required for the  ligand-bound VDR-mediated transrepression of the CYP27B1 gene.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth (By  similarity). (from UniProt P51531)
ARID1A (ENST00000457599.6) at chr1:26696404-26780817 - Homo sapiens AT-rich interaction domain 1A (ARID1A), transcript variant 2, mRNA. (from RefSeq NM_139135)
ARID1A (ENST00000324856.13) at chr1:26696015-26782104 - Homo sapiens AT-rich interaction domain 1A (ARID1A), transcript variant 1, mRNA. (from RefSeq NM_006015)
DPF3 (ENST00000546183.1) at chr14:72670853-72894101 - Belongs to the neuron-specific chromatin remodeling  complex (nBAF complex). During neural development a switch from a  stem/progenitor to a post-mitotic chromatin remodeling mechanism  occurs as neurons exit the cell cycle and become committed to  their adult state. The transition from proliferating neural  stem/progenitor cells to post-mitotic neurons requires a switch in  subunit composition of the npBAF and nBAF complexes. As neural  progenitors exit mitosis and differentiate into neurons, npBAF  complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are  exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B  or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The  npBAF complex is essential for the self-renewal/proliferative  capacity of the multipotent neural stem cells. The nBAF complex  along with CREST plays a role regulating the activity of genes  essential for dendrite growth (By similarity). Muscle-specific  component of the BAF complex, a multiprotein complex involved in  transcriptional activation and repression of select genes by  chromatin remodeling (alteration of DNA-nucleosome topology).  Specifically binds acetylated lysines on histone 3 and 4 (H3K14ac,  H3K9ac, H4K5ac, H4K8ac, H4K12ac, H4K16ac). In the complex, it acts  as a tissue-specific anchor between histone acetylations and  methylations and chromatin remodeling. It thereby probably plays  an essential role in heart and skeletal muscle development. (from UniProt Q92784)
DPF3 (ENST00000381216.8) at chr14:72661876-72894101 - Belongs to the neuron-specific chromatin remodeling  complex (nBAF complex). During neural development a switch from a  stem/progenitor to a post-mitotic chromatin remodeling mechanism  occurs as neurons exit the cell cycle and become committed to  their adult state. The transition from proliferating neural  stem/progenitor cells to post-mitotic neurons requires a switch in  subunit composition of the npBAF and nBAF complexes. As neural  progenitors exit mitosis and differentiate into neurons, npBAF  complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are  exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B  or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The  npBAF complex is essential for the self-renewal/proliferative  capacity of the multipotent neural stem cells. The nBAF complex  along with CREST plays a role regulating the activity of genes  essential for dendrite growth (By similarity). Muscle-specific  component of the BAF complex, a multiprotein complex involved in  transcriptional activation and repression of select genes by  chromatin remodeling (alteration of DNA-nucleosome topology).  Specifically binds acetylated lysines on histone 3 and 4 (H3K14ac,  H3K9ac, H4K5ac, H4K8ac, H4K12ac, H4K16ac). In the complex, it acts  as a tissue-specific anchor between histone acetylations and  methylations and chromatin remodeling. It thereby probably plays  an essential role in heart and skeletal muscle development. (from UniProt Q92784)
BAZ1B (ENST00000404251.1) at chr7:73441565-73522278 - Atypical tyrosine-protein kinase that plays a central  role in chromatin remodeling and acts as a transcription  regulator. Involved in DNA damage response by phosphorylating  'Tyr-142' of histone H2AX (H2AXY142ph). H2AXY142ph plays a central  role in DNA repair and acts as a mark that distinguishes between  apoptotic and repair responses to genotoxic stress. Essential  component of the WICH complex, a chromatin remodeling complex that  mobilizes nucleosomes and reconfigures irregular chromatin to a  regular nucleosomal array structure. The WICH complex regulates  the transcription of various genes, has a role in RNA polymerase I  and RNA polymerase III transcription, mediates the histone H2AX  phosphorylation at 'Tyr-142', and is involved in the maintenance  of chromatin structures during DNA replication processes. In the  complex, it mediates the recruitment of the WICH complex to  replication foci during DNA replication. Also involved in vitamin  D-coupled transcription regulation via its association with the  WINAC complex, a chromatin-remodeling complex recruited by vitamin  D receptor (VDR), which is required for the ligand-bound VDR-  mediated transrepression of the CYP27B1 gene. In the WINAC  complex, plays an essential role by targeting the complex to  acetylated histones, an essential step for VDR-promoter  association. (from UniProt Q9UIG0)
ARID1A (ENST00000374152.7) at chr1:26728912-26780756 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Binds DNA non-specifically. Also involved in vitamin D-  coupled transcription regulation via its association with the  WINAC complex, a chromatin-remodeling complex recruited by vitamin  D receptor (VDR), which is required for the ligand-bound VDR-  mediated transrepression of the CYP27B1 gene. Belongs to the  neural progenitors-specific chromatin remodeling complex (npBAF  complex) and the neuron-specific chromatin remodeling complex  (nBAF complex). During neural development a switch from a  stem/progenitor to a post-mitotic chromatin remodeling mechanism  occurs as neurons exit the cell cycle and become committed to  their adult state. The transition from proliferating neural  stem/progenitor cells to post-mitotic neurons requires a switch in  subunit composition of the npBAF and nBAF complexes. As neural  progenitors exit mitosis and differentiate into neurons, npBAF  complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are  exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B  or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The  npBAF complex is essential for the self-renewal/proliferative  capacity of the multipotent neural stem cells. The nBAF complex  along with CREST plays a role regulating the activity of genes  essential for dendrite growth (By similarity). (from UniProt O14497)
SMARCE1 (ENST00000348513.12) at chr17:40624962-40647818 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (SMARCE1), mRNA. (from RefSeq NM_003079)
SMARCE1 (ENST00000647508.1) at chr17:40627719-40648370 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000644701.1) at chr17:40627722-40647837 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000578044.6) at chr17:40628785-40648396 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000643683.1) at chr17:40627763-40647641 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000447024.6) at chr17:40629456-40647842 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000264640.9) at chr17:40627781-40647830 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000643318.1) at chr17:40625003-40648654 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000400122.8) at chr17:40627761-40648137 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCE1 (ENST00000377808.9) at chr17:40627762-40647842 - Involved in transcriptional activation and repression of  select genes by chromatin remodeling (alteration of DNA-nucleosome  topology). Belongs to the neural progenitors-specific chromatin  remodeling complex (npBAF complex) and the neuron-specific  chromatin remodeling complex (nBAF complex). During neural  development a switch from a stem/progenitor to a post-mitotic  chromatin remodeling mechanism occurs as neurons exit the cell  cycle and become committed to their adult state. The transition  from proliferating neural stem/progenitor cells to post-mitotic  neurons requires a switch in subunit composition of the npBAF and  nBAF complexes. As neural progenitors exit mitosis and  differentiate into neurons, npBAF complexes which contain  ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous  alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits  in neuron-specific complexes (nBAF). The npBAF complex is  essential for the self-renewal/proliferative capacity of the  multipotent neural stem cells. The nBAF complex along with CREST  plays a role regulating the activity of genes essential for  dendrite growth (By similarity). Required for the coactivation of  estrogen responsive promoters by Swi/Snf complexes and the  SRC/p160 family of histone acetyltransferases (HATs). Also  specifically interacts with the CoREST corepressor resulting in  repression of neuronal specific gene promoters in non-neuronal  cells. Also involved in vitamin D-coupled transcription regulation  via its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. (from UniProt Q969G3)
SMARCA4 (ENST00000645460.1) at chr19:10961043-11062271 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 7, mRNA. (from RefSeq NM_001128848)
SMARCA4 (ENST00000643296.1) at chr19:10960957-11062276 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 4, mRNA. (from RefSeq NM_001128845)
SMARCA4 (ENST00000589677.5) at chr19:10961105-11061816 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 5, mRNA. (from RefSeq NM_001128846)
SMARCA4 (ENST00000429416.8) at chr19:10961001-11062256 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 2, mRNA. (from RefSeq NM_001128844)
SMARCA4 (ENST00000344626.9) at chr19:10960825-11062282 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 3, mRNA. (from RefSeq NM_003072)
ACTL6A (ENST00000450518.6) at chr3:179562886-179588407 - Homo sapiens actin like 6A (ACTL6A), transcript variant 2, mRNA. (from RefSeq NM_177989)
ACTL6A (ENST00000392662.5) at chr3:179562920-179588398 - Homo sapiens actin like 6A (ACTL6A), transcript variant 3, mRNA. (from RefSeq NM_178042)
ACTL6A (ENST00000429709.7) at chr3:179562926-179588407 - Homo sapiens actin like 6A (ACTL6A), transcript variant 1, mRNA. (from RefSeq NM_004301)
SMARCA4 (ENST00000647230.1) at chr19:10960957-11062276 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 6, mRNA. (from RefSeq NM_001128847)
SMARCA4 (ENST00000646510.1) at chr19:10960992-11062276 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000646484.1) at chr19:10960932-11062279 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000644737.1) at chr19:10960932-11062468 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000541122.6) at chr19:10961081-11061816 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000590574.6) at chr19:10961321-11062273 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000444061.8) at chr19:10961110-11062271 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001007468.2 at chr22:23786931-23834518
NM_001317946.1 at chr22:23786931-23834518
NM_003073.4 at chr22:23786931-23834518
NM_001007468.2 at chr22_KI270879v1_alt:23293-70880
NM_001317946.1 at chr22_KI270879v1_alt:23293-70880
NM_003073.4 at chr22_KI270879v1_alt:23293-70880

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011530345.2 at chr22:23786962-23834516

RefSeq Genes

SMARCB1 at chr22_KI270879v1_alt:23328-74371 - (NM_001007468) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform b
SMARCB1 at chr22:23786966-23838009 - (NM_001007468) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform b
SMARCB1 at chr22_KI270879v1_alt:23328-74371 - (NM_003073) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform a
SMARCB1 at chr22:23786966-23838009 - (NM_003073) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform a
SMARCB1 at chr22:23786966-23838009 - (NM_001317946) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform c
SMARCB1 at chr22_KI270879v1_alt:23328-74371 - (NM_001317946) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform c
SMARCB1 at chr22:23786966-23838009 - (NM_001362877) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform d
SMARCB1 at chr22_KI270879v1_alt:23328-74371 - (NM_001362877) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform d

Non-Human RefSeq Genes

SMARCB1 at chr22_KI270879v1_alt:23404-70817 - (NM_001283128) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22:23787042-23834455 - (NM_001283128) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22:23787042-23834497 - (NM_001257888) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22_KI270879v1_alt:23404-70859 - (NM_001257888) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Smarcb1 at chr22_KI270879v1_alt:23532-70819 - (NM_001161853) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform 2
Smarcb1 at chr22:23787170-23834489 - (NM_001161853) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform 2
Smarcb1 at chr22_KI270879v1_alt:23532-70819 - (NM_011418) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform 1
Smarcb1 at chr22:23787170-23834489 - (NM_011418) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform 1
smarcb1 at chr22_KI270879v1_alt:23535-70817 - (NM_001006818) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
smarcb1 at chr22:23787173-23834455 - (NM_001006818) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22_KI270879v1_alt:23532-70853 - (NM_001039255) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22:23787170-23834491 - (NM_001039255) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22_KI270879v1_alt:23531-70867 - (NM_001040557) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
SMARCB1 at chr22:23787169-23834488 - (NM_001040557) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Smarcb1 at chr22_KI270879v1_alt:23532-70841 - (NM_001025728) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Smarcb1 at chr22:23787170-23834479 - (NM_001025728) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
smarcb1.S at chr22_KI270879v1_alt:23535-70817 - (NM_001092039) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
smarcb1.S at chr22:23787173-23834455 - (NM_001092039) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
smarcb1a at chr22_KI270879v1_alt:23541-70542 - (NM_001007296) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
smarcb1a at chr22:23787179-23834180 - (NM_001007296) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
smarcb1b at chr22_KI270879v1_alt:23541-70542 - (NM_131448) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b
smarcb1b at chr22:23787179-23834180 - (NM_131448) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23786978-23802275
SMARCB1 at chr22:23786980-23802060
SMARCB1 at chr22:23786983-23834505
SMARCB1 at chr22:23787001-23816927
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22:23787017-23803401
SMARCB1 at chr22:23787027-23816833
SMARCB1 at chr22:23787182-23834270
SMARCB1 at chr22:23787202-23804383
SMARCB1 at chr22:23787258-23826248
SMARCB1 at chr22:23791801-23834358
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23801299-23803629
SMARCB1 at chr22:23802001-23818669
SMARCB1 at chr22:23802547-23818580
SMARCB1 at chr22:23814991-23833587
SMARCB1 at chr22:23823108-23834353
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23786978-23802275
SMARCB1 at chr22:23786980-23802060
SMARCB1 at chr22:23786983-23834505
SMARCB1 at chr22:23787001-23816927
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22:23787017-23803401
SMARCB1 at chr22:23787027-23816833
SMARCB1 at chr22:23787182-23834270
SMARCB1 at chr22:23787202-23804383
SMARCB1 at chr22:23787258-23826248
SMARCB1 at chr22:23791801-23834358
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23801299-23803629
SMARCB1 at chr22:23802001-23818669
SMARCB1 at chr22:23802547-23818580
SMARCB1 at chr22:23814991-23833587
SMARCB1 at chr22:23823108-23834353
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SMARCB1 at chr22:23786931-23834540
SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22:23786963-23834505
SMARCB1 at chr22:23786978-23802275
SMARCB1 at chr22:23786980-23802060
SMARCB1 at chr22:23786983-23834505
SMARCB1 at chr22:23787001-23816927
SMARCB1 at chr22:23787011-23834501
SMARCB1 at chr22:23787017-23803401
SMARCB1 at chr22:23787027-23816833
SMARCB1 at chr22:23787182-23834270
SMARCB1 at chr22:23787202-23804383
SMARCB1 at chr22:23787258-23826248
SMARCB1 at chr22:23791801-23834358
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23801299-23803629
SMARCB1 at chr22:23802001-23818669
SMARCB1 at chr22:23802547-23818580
SMARCB1 at chr22:23814991-23833587
SMARCB1 at chr22:23823108-23834353
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23791811-23803322
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-39784
SMARCB1 at chr22_KI270879v1_alt:23325-70878
SMARCB1 at chr22_KI270879v1_alt:23336-70878
SMARCB1 at chr22_KI270879v1_alt:23356-70878
SMARCB1 at chr22_KI270879v1_alt:23373-70545
SMARCB1 at chr22_KI270879v1_alt:29963-37822
SMARCB1 at chr22_KI270879v1_alt:52731-61678

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22_KI270879v1_alt:23325-70876

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SMARCB1 at chr22:23786963-23803422
SMARCB1 at chr22:23786963-23834516
SMARCB1 at chr22:23786974-23834516
SMARCB1 at chr22:23786994-23834516
SMARCB1 at chr22:23787011-23834183
SMARCB1 at chr22:23793601-23801460
SMARCB1 at chr22:23816369-23825316
SMARCB1 at chr22_KI270879v1_alt:23325-70876

International Knockout Mouse Consortium Genes Mapped to Human Genome

Smarcb1_35972 at chr22:23786963-23834518
Smarcb1_92542 at chr22:23786963-23834518
Smarcb1_93660 at chr22:23786963-23834518

Human Aligned mRNA Search Results

AY207470 - Homo sapiens integrase interactor 1 protein isoform D (SMARCB1) mRNA, partial cds; alternatively spliced.
AY207471 - Homo sapiens integrase interactor 1 protein isoform E (SMARCB1) mRNA, partial cds; alternatively spliced.
AY207472 - Homo sapiens integrase interactor 1 protein isoform F (SMARCB1) mRNA, partial cds; alternatively spliced.
AY562997 - Homo sapiens SWI/SNF-related matrix-associated protein (SMARCB1) mRNA, partial cds, alternatively spliced.
BC117114 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:150723 IMAGE:40125665), complete cds.
BC143667 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:177198 IMAGE:9052181), complete cds.
CR456581 - Homo sapiens SMARCB1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.SMARCB1).

Non-Human Aligned mRNA Search Results

BC164198 - Danio rerio SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b, mRNA (cDNA clone MGC:191373 IMAGE:100059682), complete cds.
BC154619 - Danio rerio SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a, mRNA (cDNA clone MGC:172261 IMAGE:8799821), complete cds.
KA648594 - TSA: Musca domestica ALHF_07711.g4929 mRNA sequence.
BC113345 - Bos taurus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:138029 IMAGE:8085512), complete cds.
BC085668 - Danio rerio SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a, mRNA (cDNA clone MGC:92517 IMAGE:7047806), complete cds.
BC083229 - Danio rerio SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b, mRNA (cDNA clone MGC:101626 IMAGE:7225238), complete cds.
MG133752 - Synthetic construct Xenopus tropicalis clone IMAGE:6987293 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (smarcb1) gene, encodes complete protein.
AJ249795 - Danio rerio partial mRNA for SWI/SNF-related, matr (smarcb1 gene).
BC076714 - Xenopus tropicalis SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:79836 IMAGE:6987293), complete cds.
BC025163 - Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:36040 IMAGE:3154501), complete cds.
BC099195 - Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:116367 IMAGE:7383650), complete cds.
FN317552 - Schistosoma japonicum isolate Anhui full length mRNA clone SJFCE1433|FSE001-P00008-L05, complete sequence.
BC133572 - Bos taurus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, mRNA (cDNA clone MGC:148724 IMAGE:8246492), complete cds.
BT021192 - Bos taurus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), mRNA, complete cds.
JU336021 - TSA: Macaca mulatta Mamu_521832 mRNA sequence.
JU336022 - TSA: Macaca mulatta Mamu_521833 mRNA sequence.
JU476885 - TSA: Macaca mulatta Mamu_376729 mRNA sequence.
JU476886 - TSA: Macaca mulatta Mamu_376730 mRNA sequence.
JV047994 - TSA: Macaca mulatta Mamu_420503 mRNA sequence.
JV047995 - TSA: Macaca mulatta Mamu_420504 mRNA sequence.
KU557484 - Gallus gallus breed White Leghorn matrix metalloproteinase 11 (SMARCB1) mRNA, partial cds.
AB041578 - Mus musculus brain cDNA, clone MNCb-1957, similar to Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (Smarcb1), mRNA.
AB173747 - Macaca fascicularis brain cDNA clone: QmoA-10008, similar to human SWI/SNF related, matrix associated, actin dependentregulator of chromatin, subfamily b, member 1 (SMARCB1), mRNA, RefSeq: NM_003073.2.

GeneReviews

SMARCB1 at chr22:23786946-23838008
SMARCB1 at chr22_KI270879v1_alt:23325-70878