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Gencode Genes

SLC9A8 (ENST00000417961.5) at chr20:49812713-49892241 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 6, non-coding RNA. (from RefSeq NR_048540)
SLC9A8 (ENST00000490250.1) at chr20:49886371-49892242 - solute carrier family 9 member A8 (from HGNC SLC9A8)
SLC9A8 (ENST00000489787.1) at chr20:49812894-49815444 - solute carrier family 9 member A8 (from HGNC SLC9A8)
SLC9A8 (ENST00000361573.2) at chr20:49812881-49892242 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 2, mRNA. (from RefSeq NM_015266)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NR_048538.1 at chr20:49812713-49892242
NR_048540.1 at chr20:49812713-49892242
NR_048539.1 at chr20:49812713-49892242
NR_048537.1 at chr20:49812713-49892242
NM_015266.2 at chr20:49812713-49892242
NM_001260491.1 at chr20:49812713-49892242

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011528745.2 at chr20:49812848-49863021
XM_017027754.2 at chr20:49812848-49886587
XM_011528740.2 at chr20:49812848-49886745
XM_011528741.2 at chr20:49812848-49892242
XM_011528739.2 at chr20:49812848-49892242
XM_011528738.2 at chr20:49812848-49892242
XM_011528736.2 at chr20:49812848-49892242
XM_006723756.1 at chr20:49812851-49892242
XM_011528737.1 at chr20:49812894-49892242
XM_017027755.2 at chr20:49812904-49892242
XM_011528742.1 at chr20:49812911-49892242
XM_017027756.2 at chr20:49812920-49892242
XM_011528743.2 at chr20:49862708-49892242
XM_011528744.2 at chr20:49863511-49892242

RefSeq Genes

SLC9A8 at chr20:49812828-49892242 - (NR_048540) 
SLC9A8 at chr20:49812828-49892242 - (NR_048539) 
SLC9A8 at chr20:49812828-49892242 - (NR_048538) 
SLC9A8 at chr20:49812828-49892242 - (NR_048537) 
SLC9A8 at chr20:49812713-49892242 - (NM_001260491) sodium/hydrogen exchanger 8 isoform 1
SLC9A8 at chr20:49812828-49892242 - (NM_015266) sodium/hydrogen exchanger 8 isoform 2

Non-Human RefSeq Genes

slc9a8 at chr20:49815012-49887936 - (NM_001197262) sodium/hydrogen exchanger 8
SLC9A8 at chr20:49812911-49889633 - (NM_001283375) sodium/hydrogen exchanger 8
SLC9A8 at chr20:49815012-49887936 - (NM_001039275) sodium/hydrogen exchanger 8
Slc9a8 at chr20:49812917-49887936 - (NM_001025281) sodium/hydrogen exchanger 8
Slc9a8 at chr20:49812917-49887936 - (NR_130767) 
Slc9a8 at chr20:49812917-49887936 - (NM_001304542) sodium/hydrogen exchanger 8 isoform d
Slc9a8 at chr20:49812917-49887936 - (NM_001304540) sodium/hydrogen exchanger 8 isoform c
Slc9a8 at chr20:49812917-49887936 - (NM_148929) sodium/hydrogen exchanger 8 isoform a
slc9a8 at chr20:49815100-49887927 - (NM_001008586) sodium/hydrogen exchanger 8 precursor

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SLC9A8 at chr20:49812713-49892241
SLC9A8 at chr20:49812881-49892242
SLC9A8 at chr20:49812894-49815444
SLC9A8 at chr20:49886371-49892242

International Knockout Mouse Consortium Genes Mapped to Human Genome

Slc9a8_33270 at chr20:49812713-49892235
Slc9a8_33271 at chr20:49812713-49892235
Slc9a8_33272 at chr20:49812713-49892235
Slc9a8_75268 at chr20:49812713-49892235
Slc9a8_90130 at chr20:49812713-49892235
Slc9a8_VG15042 at chr20:49812713-49892235

BC112213 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1861  100.0%         20     +  49812891  49888019  BC112213     1  1861  1861

Human Unaligned mRNA Search Results

NR_048540 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 6, non-coding RNA.
NR_048539 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 5, non-coding RNA.
NR_048538 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 4, non-coding RNA.
NR_048537 - Homo sapiens solute carrier family 9 member A8 (SLC9A8), transcript variant 3, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC165875 - Danio rerio solute carrier family 9 (sodium/hydrogen exchanger), member 8, mRNA (cDNA clone MGC:192963 IMAGE:100061451), complete cds.
BC034508 - Synthetic construct Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8, mRNA (cDNA clone IMAGE:4014728), partial cds.
BC086841 - Danio rerio solute carrier family 9 (sodium/hydrogen exchanger), member 8, mRNA (cDNA clone MGC:103660 IMAGE:7256364), complete cds.
BC030879 - Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8, mRNA (cDNA clone MGC:31394 IMAGE:4241988), complete cds.
BC058947 - Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8, mRNA (cDNA clone MGC:66683 IMAGE:5702781), complete cds.
AB200333 - Takifugu obscurus Slc9a8 mRNA for NHE8, complete cds.
JU333642 - TSA: Macaca mulatta Mamu_522419 mRNA sequence.
JU472051 - TSA: Macaca mulatta Mamu_373221 mRNA sequence.
AB168343 - Macaca fascicularis testis cDNA clone: QtsA-11355, similar to human solute carrier family 9 (sodium/hydrogen exchanger),isoform 8 (SLC9A8), mRNA, RefSeq: NM_015266.1.