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UCSC Genes

SLC1A2 (uc001mwd.3) at chr11:35272752-35441105 - Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant 1, mRNA.
SLC1A2 (uc021qfy.1) at chr11:35338924-35441610 - Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant 2, mRNA.
SLC1A2 (uc021qfx.1) at chr11:35272752-35441610 - Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant 3, mRNA.
SLC1A2 (uc010rev.1) at chr11:35287014-35441105 - Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant 1, mRNA.
SLC1A2 (uc001mwe.3) at chr11:35272752-35441610 - Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 2 (SLC1A2), transcript variant 2, mRNA.
MTDH (uc003yhz.3) at chr8:98656407-98742488 - Homo sapiens metadherin (MTDH), mRNA.
AJUBA (uc001whz.3) at chr14:23440410-23451848 - Homo sapiens ajuba LIM protein (AJUBA), transcript variant 1, mRNA.
SGK1 (uc003qen.4) at chr6:134490384-134496034 - Homo sapiens serum/glucocorticoid regulated kinase 1 (SGK1), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_004171.3 at chr11:35272752-35441105
NM_001252652.1 at chr11:35272752-35441610
NM_001195728.2 at chr11:35272752-35441610

RefSeq Genes

SLC1A2 at chr11:35272752-35441605 - (NM_001252652) excitatory amino acid transporter 2 isoform 2
SLC1A2 at chr11:35272752-35441605 - (NM_001195728) excitatory amino acid transporter 2 isoform 2
SLC1A2 at chr11:35272752-35441105 - (NM_004171) excitatory amino acid transporter 2 isoform 1

Non-Human RefSeq Genes

SLC1A2 at chr11:35282360-35441571 - (NM_001133113) excitatory amino acid transporter 2
SLC1A2 at chr11:35280604-35441104 - (NM_001261669) excitatory amino acid transporter 2
SLC1A2 at chr11:35282411-35339064 - (NM_001009334) excitatory amino acid transporter 2
SLC1A2 at chr11:35287017-35339064 - (NM_001282830) excitatory amino acid transporter 2
SLC1A2 at chr11:35281386-35439956 - (NM_001003138) excitatory amino acid transporter 2
SLC1A2 at chr11:35287017-35440516 - (NM_001012899) excitatory amino acid transporter 2
Slc1a2 at chr11:35282356-35440617 - (NM_017215) excitatory amino acid transporter 2 isoform a
Slc1a2 at chr11:35286848-35440617 - (NM_001035233) excitatory amino acid transporter 2 isoform b
Slc1a2 at chr11:35286848-35339066 - (NM_011393) excitatory amino acid transporter 2 isoform 3
Slc1a2 at chr11:35272753-35339066 - (NM_001077515) excitatory amino acid transporter 2 isoform 2
Slc1a2 at chr11:35282356-35339066 - (NM_001302089) excitatory amino acid transporter 2 isoform c
Slc1a2 at chr11:35272753-35441101 - (NM_001077514) excitatory amino acid transporter 2 isoform 1
Slc1a2 at chr11:35286848-35441101 - (NM_001361018) excitatory amino acid transporter 2 isoform 4
slc1a2a at chr11:35287158-35338969 - (NM_001190305) solute carrier family 1 member 2a
slc1a2b at chr11:35287071-35338969 - (NM_199979) excitatory amino acid transporter 2

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SLC1A2 at chr11:35272752-35441105
SLC1A2 at chr11:35278499-35440760
SLC1A2 at chr11:35278499-35441604
SLC1A2 at chr11:35278499-35441605
SLC1A2 at chr11:35280517-35441009
SLC1A2 at chr11:35280518-35440656
SLC1A2 at chr11:35280519-35440833
SLC1A2 at chr11:35280622-35441105
SLC1A2 at chr11:35280897-35441610
SLC1A2 at chr11:35280911-35441571
SLC1A2 at chr11:35281087-35440188
SLC1A2 at chr11:35281384-35439956
SLC1A2 at chr11:35282233-35381675
SLC1A2 at chr11:35282356-35381597
SLC1A2 at chr11:35282357-35441532
SLC1A2 at chr11:35286377-35381635
SLC1A2 at chr11:35286516-35441100
SLC1A2 at chr11:35286581-35441571
SLC1A2 at chr11:35286651-35441571
SLC1A2 at chr11:35286668-35441571
SLC1A2 at chr11:35287034-35440645
SLC1A2 at chr11:35301916-35441101

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

SLC1A2 at chr11:35272752-35441105
SLC1A2 at chr11:35272789-35323188
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35276243-35308465
SLC1A2 at chr11:35278499-35328822
SLC1A2 at chr11:35278499-35440760
SLC1A2 at chr11:35278499-35441604
SLC1A2 at chr11:35278499-35441605
SLC1A2 at chr11:35278500-35441105
SLC1A2 at chr11:35280517-35441009
SLC1A2 at chr11:35280518-35440656
SLC1A2 at chr11:35280519-35440833
SLC1A2 at chr11:35280622-35441105
SLC1A2 at chr11:35280897-35441610
SLC1A2 at chr11:35280911-35441571
SLC1A2 at chr11:35281087-35440188
SLC1A2 at chr11:35281384-35439956
SLC1A2 at chr11:35281786-35435343
SLC1A2 at chr11:35282233-35381675
SLC1A2 at chr11:35282348-35285690
SLC1A2 at chr11:35282356-35381597
SLC1A2 at chr11:35282357-35441532
SLC1A2 at chr11:35282404-35440902
SLC1A2 at chr11:35283362-35440513
SLC1A2 at chr11:35286377-35381635
SLC1A2 at chr11:35286516-35441100
SLC1A2 at chr11:35286581-35441571
SLC1A2 at chr11:35286651-35441571
SLC1A2 at chr11:35286668-35441571
SLC1A2 at chr11:35286990-35338930
SLC1A2 at chr11:35287034-35440645
SLC1A2 at chr11:35301916-35441101
SLC1A2 at chr11:35307598-35328818
SLC1A2 at chr11:35307834-35327710
SLC1A2 at chr11:35308363-35373907
SLC1A2 at chr11:35308363-35426037
SLC1A2 at chr11:35308363-35426064
SLC1A2 at chr11:35308363-35441499
SLC1A2 at chr11:35308365-35426037
SLC1A2 at chr11:35308398-35441446
SLC1A2 at chr11:35312939-35441093
SLC1A2 at chr11:35313755-35381693
SLC1A2 at chr11:35319292-35328818
SLC1A2 at chr11:35320925-35328823
SLC1A2 at chr11:35333686-35338928
SLC1A2 at chr11:35336537-35441571
SLC1A2 at chr11:35339051-35441502
SLC1A2 at chr11:35339051-35441512
SLC1A2 at chr11:35401906-35440588
SLC1A2 at chr11:35412228-35413907

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SLC1A2 at chr11:35272752-35441140
SLC1A2 at chr11:35278499-35440760
SLC1A2 at chr11:35278499-35441604
SLC1A2 at chr11:35278499-35441605
SLC1A2 at chr11:35280517-35441009
SLC1A2 at chr11:35280518-35440656
SLC1A2 at chr11:35280519-35440833
SLC1A2 at chr11:35280622-35441105
SLC1A2 at chr11:35280897-35441610
SLC1A2 at chr11:35280911-35441571
SLC1A2 at chr11:35281087-35440188
SLC1A2 at chr11:35281384-35439956
SLC1A2 at chr11:35282233-35381675
SLC1A2 at chr11:35282356-35381597
SLC1A2 at chr11:35282357-35441532
SLC1A2 at chr11:35286377-35381635
SLC1A2 at chr11:35286516-35441100
SLC1A2 at chr11:35286581-35441571
SLC1A2 at chr11:35286651-35441571
SLC1A2 at chr11:35286668-35441571
SLC1A2 at chr11:35287034-35440645
SLC1A2 at chr11:35301916-35441101

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

SLC1A2 at chr11:35272752-35441140
SLC1A2 at chr11:35272789-35323188
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35276243-35308465
SLC1A2 at chr11:35278499-35328822
SLC1A2 at chr11:35278499-35440760
SLC1A2 at chr11:35278499-35441604
SLC1A2 at chr11:35278499-35441605
SLC1A2 at chr11:35278500-35441105
SLC1A2 at chr11:35280517-35441009
SLC1A2 at chr11:35280518-35440656
SLC1A2 at chr11:35280519-35440833
SLC1A2 at chr11:35280622-35441105
SLC1A2 at chr11:35280897-35441610
SLC1A2 at chr11:35280911-35441571
SLC1A2 at chr11:35281087-35440188
SLC1A2 at chr11:35281384-35439956
SLC1A2 at chr11:35281786-35435343
SLC1A2 at chr11:35282233-35381675
SLC1A2 at chr11:35282348-35285690
SLC1A2 at chr11:35282356-35381597
SLC1A2 at chr11:35282357-35441532
SLC1A2 at chr11:35282404-35440902
SLC1A2 at chr11:35283362-35440513
SLC1A2 at chr11:35286377-35381635
SLC1A2 at chr11:35286516-35441100
SLC1A2 at chr11:35286581-35441571
SLC1A2 at chr11:35286651-35441571
SLC1A2 at chr11:35286668-35441571
SLC1A2 at chr11:35286990-35338930
SLC1A2 at chr11:35287034-35440645
SLC1A2 at chr11:35301916-35441101
SLC1A2 at chr11:35307598-35328818
SLC1A2 at chr11:35307834-35327710
SLC1A2 at chr11:35308363-35373907
SLC1A2 at chr11:35308363-35426037
SLC1A2 at chr11:35308363-35426064
SLC1A2 at chr11:35308363-35441499
SLC1A2 at chr11:35308365-35426037
SLC1A2 at chr11:35308398-35441446
SLC1A2 at chr11:35312939-35441093
SLC1A2 at chr11:35313755-35381693
SLC1A2 at chr11:35319292-35328818
SLC1A2 at chr11:35320925-35328823
SLC1A2 at chr11:35333686-35338928
SLC1A2 at chr11:35336537-35441571
SLC1A2 at chr11:35339051-35441502
SLC1A2 at chr11:35339051-35441512
SLC1A2 at chr11:35401906-35440588
SLC1A2 at chr11:35412228-35413907

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35286941-35440617

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35286941-35440617
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35286941-35440617

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35286941-35440617
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

Basic Gene Annotation Set from GENCODE Version 19

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35286941-35440617

Comprehensive Gene Annotation Set from GENCODE Version 19

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35286941-35440617
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35282418-35308334

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35282418-35308334

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35282418-35308334

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

SLC1A2 at chr11:35272753-35440796
SLC1A2 at chr11:35272772-35441524
SLC1A2 at chr11:35272772-35441610
SLC1A2 at chr11:35275968-35287292
SLC1A2 at chr11:35282418-35308334
SLC1A2 at chr11:35287148-35323075
SLC1A2 at chr11:35327740-35441573

International Knockout Mouse Consortium Genes Mapped to Human Genome

Slc1a2_47447 at chr11:35272752-35441105
Slc1a2_49581 at chr11:35272752-35441105
Slc1a2_84720 at chr11:35272752-35441105
Slc1a2_VG11631 at chr11:35272752-35441105

Alias of STS Marker

SLC1A2 at chr11:35182369-35382447 - (RH27346)

BC132768 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 8316  100.0%         11     -  35276009  35440672  BC132768     1  8316  8316

Non-Human Aligned mRNA Search Results

HM138692 - Danio rerio excitatory amino acid transporter SLC1A2b mRNA, complete cds.
HM138691 - Danio rerio excitatory amino acid transporter SLC1A2a mRNA, complete cds.
AY643513 - Rattus norvegicus glial glutamate transporter GLT1/V0 (Slc1a2) mRNA, partial cds, alternatively spliced.
AY643516 - Rattus norvegicus glial glutamate transporter GLT1/V3 (Slc1a2) mRNA, partial cds, alternatively spliced.
AY643517 - Rattus norvegicus glial glutamate transporter GLT1/V4 (Slc1a2) mRNA, partial cds, alternatively spliced.
BC138255 - Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2, mRNA (cDNA clone MGC:169879 IMAGE:8861274), complete cds.
BC138256 - Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2, mRNA (cDNA clone MGC:169880 IMAGE:8861275), complete cds.
JT417218 - TSA: Ictalurus punctatus aby_k67:759706 mRNA sequence.
EF551337 - Bos taurus solute carrier family 1 member 2 (SLC1A2) mRNA, partial cds.
AY369852 - Pan troglodytes solute carrier family 1 (SLC1A2) mRNA, partial cds.
AY369853 - Macaca mulatta solute carrier family 1 (SLC1A2) mRNA, partial cds.
JU319738 - TSA: Macaca mulatta Mamu_501916 mRNA sequence.
FJ392641 - Danio rerio solute carrier family 1 (glial high affinity glutamate transporter) member 2 (slc1a2) mRNA, partial cds.
BC056751 - Danio rerio solute carrier family 1 (glial high affinity glutamate transporter), member 2, mRNA (cDNA clone MGC:65897 IMAGE:6801526), complete cds.
AB171491 - Macaca fascicularis brain cDNA clone: QccE-20970, similar to human solute carrier family 1 (glial high affinity glutamatetransporter), member 2 (SLC1A2), mRNA, RefSeq: NM_004171.2.
AB170342 - Macaca fascicularis brain cDNA clone: QmoA-10432, similar to human solute carrier family 1 (glial high affinity glutamatetransporter), member 2 (SLC1A2), mRNA, RefSeq: NM_004171.2.

Ensembl Genes

SLC1A2 at chr11:35287148-35323075 - (ENST00000531628)
SLC1A2 at chr11:35282418-35308334 - (ENST00000479543)
SLC1A2 at chr11:35272772-35441524 - (ENST00000395750)
SLC1A2 at chr11:35272753-35440796 - (ENST00000278379)
SLC1A2 at chr11:35272772-35441610 - (ENST00000395753)
SLC1A2 at chr11:35275968-35287292 - (ENST00000464522)
SLC1A2 at chr11:35286941-35440617 - (ENST00000606205)
SLC1A2 at chr11:35327740-35441573 - (ENST00000449068)

Vega Protein-Coding Annotations

OTTHUMT00000258181 at chr11:35272753-35440796
OTTHUMT00000258183 at chr11:35272772-35441524
OTTHUMT00000258182 at chr11:35272772-35441610
OTTHUMT00000103330 at chr11:35275968-35287305
OTTHUMT00000258184 at chr11:35282418-35308334
OTTHUMT00000258185 at chr11:35327740-35441573