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Gencode Genes

SHH (ENST00000297261.7) at chr7:155799980-155812463 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 1, mRNA. (from RefSeq NM_000193)
SHH (ENST00000472308.1) at chr7:155806582-155807370 - sonic hedgehog (from HGNC SHH)
SHH (ENST00000441114.5) at chr7:155800039-155809072 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 3, non-coding RNA. (from RefSeq NR_132318)
SHH (ENST00000435425.1) at chr7:155800050-155809072 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 4, non-coding RNA. (from RefSeq NR_132319)
SHH (ENST00000430104.5) at chr7:155800040-155809072 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 2, mRNA. (from RefSeq NM_001310462)
TULP3 (ENST00000540184.5) at chr12:2877223-2934562 - Negatively regulates SHH signal transduction (By  similarity). Probably functions in signal transduction from  heterotrimeric G protein-coupled receptors. Binds to  phosphorylated inositide lipids. (from UniProt O75386)
IFT122 (ENST00000504021.5) at chr3:129440237-129520355 - Required for cilia formation and Shh signaling during  neuronal patterning (By similarity). (from UniProt Q9HBG6)
KIAA0586 (ENST00000556134.5) at chr14:58427385-58548828 - Required for ciliogenesis and sonic hedgehog/SHH  signaling (By similarity). (from UniProt Q9BVV6)
PTCH1 (ENST00000430669.6) at chr9:95443412-95517057 - Acts as a receptor for sonic hedgehog (SHH), indian  hedgehog (IHH) and desert hedgehog (DHH). Associates with the  smoothened protein (SMO) to transduce the hedgehog's proteins  signal. Seems to have a tumor suppressor function, as inactivation  of this protein is probably a necessary, if not sufficient step  for tumorigenesis. (from UniProt Q13635)
ULK3 (ENST00000568667.5) at chr15:74837213-74842676 - Serine/threonine protein kinase that acts as a regulator  of Sonic hedgehog (SHH) signaling and autophagy. Acts as a  negative regulator of SHH signaling in the absence of SHH ligand:  interacts with SUFU, thereby inactivating the protein kinase  activity and preventing phosphorylation of GLI proteins (GLI1,  GLI2 and/or GLI3). Positively regulates SHH signaling in the  presence of SHH: dissociates from SUFU, autophosphorylates and  mediates phosphorylation of GLI2, activating it and promoting its  nuclear translocation. Phosphorylates in vitro GLI2, as well as  GLI1 and GLI3, although less efficiently. Also acts as a regulator  of autophagy: following cellular senescence, able to induce  autophagy. (from UniProt Q6PHR2)
HHATL (ENST00000441594.6) at chr3:42692663-42702798 - Homo sapiens hedgehog acyltransferase like (HHATL), transcript variant 1, mRNA. (from RefSeq NM_020707)
HHATL (ENST00000310417.9) at chr3:42692663-42701521 - Homo sapiens hedgehog acyltransferase like (HHATL), transcript variant 2, non-coding RNA. (from RefSeq NR_027753)
TCTN3 (ENST00000614499.4) at chr10:95663396-95694143 - Part of the tectonic-like complex which is required for  tissue-specific ciliogenesis and may regulate ciliary membrane  composition (By similarity). May be involved in apoptosis  regulation. Necessary for signal transduction through the sonic  hedgehog (Shh) signaling pathway. (from UniProt Q6NUS6)
TCTN3 (ENST00000371209.5) at chr10:95683261-95693899 - Part of the tectonic-like complex which is required for  tissue-specific ciliogenesis and may regulate ciliary membrane  composition (By similarity). May be involved in apoptosis  regulation. Necessary for signal transduction through the sonic  hedgehog (Shh) signaling pathway. (from UniProt Q6NUS6)
ULK3 (ENST00000569437.5) at chr15:74836118-74843193 - Homo sapiens unc-51 like kinase 3 (ULK3), transcript variant 2, mRNA. (from RefSeq NM_001284364)
ULK3 (ENST00000440863.7) at chr15:74836118-74843156 - Homo sapiens unc-51 like kinase 3 (ULK3), transcript variant 3, mRNA. (from RefSeq NM_001284365)
CC2D2A (ENST00000424120.5) at chr4:15469865-15601557 - Component of the tectonic-like complex, a complex  localized at the transition zone of primary cilia and acting as a  barrier that prevents diffusion of transmembrane proteins between  the cilia and plasma membranes. Required for ciliogenesis and  sonic hedgehog/SHH signaling (By similarity). (from UniProt Q9P2K1)
CC2D2A (ENST00000507954.5) at chr4:15469903-15481290 - Component of the tectonic-like complex, a complex  localized at the transition zone of primary cilia and acting as a  barrier that prevents diffusion of transmembrane proteins between  the cilia and plasma membranes. Required for ciliogenesis and  sonic hedgehog/SHH signaling (By similarity). (from UniProt Q9P2K1)
CC2D2A (ENST00000503658.2) at chr4:15470013-15481351 - Component of the tectonic-like complex, a complex  localized at the transition zone of primary cilia and acting as a  barrier that prevents diffusion of transmembrane proteins between  the cilia and plasma membranes. Required for ciliogenesis and  sonic hedgehog/SHH signaling (By similarity). (from UniProt Q9P2K1)
GLI1 (ENST00000528467.1) at chr12:57463692-57472059 - Acts as a transcriptional activator. May regulate the  transcription of specific genes during normal development. May  play a role in craniofacial development and digital development,  as well as development of the central nervous system and  gastrointestinal tract. Mediates SHH signaling and thus cell  proliferation and differentiation. (from UniProt P08151)
GLI2 (ENST00000452319.5) at chr2:120792409-120992653 - Acts as a transcriptional activator. May play a role  during embryogenesis. Binds to the DNA sequence 5'-GAACCACCCA-3'  which is part of the TRE-2S regulatory element that augments the  Tax-dependent enhancer of human T-cell leukemia virus type 1.  Implicated in the transduction of SHH signal. (from UniProt P10070)
KIF7 (ENST00000394412.8) at chr15:89627977-89655467 - Homo sapiens kinesin family member 7 (KIF7), mRNA. (from RefSeq NM_198525)
GLI3 (ENST00000395925.8) at chr7:41960949-42237209 - Homo sapiens GLI family zinc finger 3 (GLI3), mRNA. (from RefSeq NM_000168)
HHAT (ENST00000627903.2) at chr1_KN538360v1_fix:107994-459395 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 2, mRNA. (from RefSeq NM_001122834)
HHAT (ENST00000628693.2) at chr1_KN538360v1_fix:108648-459395 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 5, mRNA. (from RefSeq NM_001170587)
HHAT (ENST00000626327.2) at chr1_KN538360v1_fix:108648-459395 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 4, mRNA. (from RefSeq NM_001170588)
HHAT (ENST00000625820.2) at chr1_KN538360v1_fix:109042-459395 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 6, mRNA. (from RefSeq NM_001170580)
HHAT (ENST00000625523.2) at chr1_KN538360v1_fix:107994-459395 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 3, mRNA. (from RefSeq NM_001170564)
TMEM17 (ENST00000335390.6) at chr2:62500218-62506195 - Homo sapiens transmembrane protein 17 (TMEM17), mRNA. (from RefSeq NM_198276)
HHAT (ENST00000545154.5) at chr1:210328906-210676296 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 5, mRNA. (from RefSeq NM_001170587)
HHAT (ENST00000541565.5) at chr1:210328252-210676296 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 3, mRNA. (from RefSeq NM_001170564)
HHAT (ENST00000367010.5) at chr1:210329300-210676296 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 6, mRNA. (from RefSeq NM_001170580)
HHAT (ENST00000629360.3) at chr1_KN538360v1_fix:108644-459389 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 1, mRNA. (from RefSeq NM_018194)
HHAT (ENST00000413764.6) at chr1:210328252-210676296 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 2, mRNA. (from RefSeq NM_001122834)
HHAT (ENST00000537898.5) at chr1:210328906-210676296 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 4, mRNA. (from RefSeq NM_001170588)
HHAT (ENST00000261458.8) at chr1:210328902-210676290 - Homo sapiens hedgehog acyltransferase (HHAT), transcript variant 1, mRNA. (from RefSeq NM_018194)
HHIP (ENST00000434550.2) at chr4:144646172-144660273 - Modulates hedgehog signaling in several cell types  including brain and lung through direct interaction with members  of the hedgehog family. (from UniProt Q96QV1)
KIAA0586 (ENST00000354386.10) at chr14:58427385-58548023 - Homo sapiens KIAA0586 (KIAA0586), transcript variant 1, mRNA. (from RefSeq NM_001244189)
KIAA0586 (ENST00000619416.4) at chr14:58427402-58551289 - Homo sapiens KIAA0586 (KIAA0586), transcript variant 2, mRNA. (from RefSeq NM_001244190)
KIAA0586 (ENST00000423743.7) at chr14:58427436-58548498 - Homo sapiens KIAA0586 (KIAA0586), transcript variant 4, mRNA. (from RefSeq NM_001244192)
KIAA0586 (ENST00000261244.9) at chr14:58427990-58548045 - Homo sapiens KIAA0586 (KIAA0586), transcript variant 5, mRNA. (from RefSeq NM_014749)
GLI2 (ENST00000361492.8) at chr2:120797291-120992652 - Homo sapiens GLI family zinc finger 2 (GLI2), transcript variant 2, mRNA. (from RefSeq NM_005270)
CDK20 (ENST00000605159.5) at chr9:87966611-87974505 - Homo sapiens cyclin dependent kinase 20 (CDK20), transcript variant 4, mRNA. (from RefSeq NM_001170639)
CDK20 (ENST00000336654.9) at chr9:87966446-87974589 - Homo sapiens cyclin dependent kinase 20 (CDK20), transcript variant 1, mRNA. (from RefSeq NM_178432)
CDK20 (ENST00000375883.7) at chr9:87966446-87974753 - Homo sapiens cyclin dependent kinase 20 (CDK20), transcript variant 2, mRNA. (from RefSeq NM_012119)
CDK20 (ENST00000375871.8) at chr9:87966450-87974487 - Homo sapiens cyclin dependent kinase 20 (CDK20), transcript variant 5, mRNA. (from RefSeq NM_001170640)
CDK20 (ENST00000325303.8) at chr9:87966634-87974752 - Homo sapiens cyclin dependent kinase 20 (CDK20), transcript variant 3, mRNA. (from RefSeq NM_001039803)
TBC1D32 (ENST00000464622.5) at chr6:121080237-121334478 - Homo sapiens TBC1 domain family member 32 (TBC1D32), transcript variant 2, non-coding RNA. (from RefSeq NR_104452)
TBC1D32 (ENST00000398212.7) at chr6:121079494-121334480 - Homo sapiens TBC1 domain family member 32 (TBC1D32), transcript variant 1, mRNA. (from RefSeq NM_152730)
MED12 (ENST00000374102.5) at chrX:71118695-71142454 - Component of the Mediator complex, a coactivator  involved in the regulated transcription of nearly all RNA  polymerase II-dependent genes. Mediator functions as a bridge to  convey information from gene-specific regulatory proteins to the  basal RNA polymerase II transcription machinery. Mediator is  recruited to promoters by direct interactions with regulatory  proteins and serves as a scaffold for the assembly of a functional  preinitiation complex with RNA polymerase II and the general  transcription factors. This subunit may specifically regulate  transcription of targets of the Wnt signaling pathway and SHH  signaling pathway. (from UniProt Q93074)
PTCH2 (ENST00000447098.6) at chr1:44819844-44842944 - Homo sapiens patched 2 (PTCH2), transcript variant 2, mRNA. (from RefSeq NM_001166292)
PTCH2 (ENST00000372192.4) at chr1:44821938-44843253 - Homo sapiens patched 2 (PTCH2), transcript variant 1, mRNA. (from RefSeq NM_003738)
HHIP (ENST00000296575.8) at chr4:144646156-144745271 - Homo sapiens hedgehog interacting protein (HHIP), mRNA. (from RefSeq NM_022475)
TMEM107 (ENST00000316425.9) at chr17:8174001-8176399 - Homo sapiens transmembrane protein 107 (TMEM107), transcript variant 1, mRNA. (from RefSeq NM_032354)
TMEM107 (ENST00000437139.7) at chr17:8172457-8176380 - Homo sapiens transmembrane protein 107 (TMEM107), transcript variant 2, mRNA. (from RefSeq NM_183065)
CC2D2A (ENST00000438599.6) at chr4:15469865-15482262 - Homo sapiens coiled-coil and C2 domain containing 2A (CC2D2A), transcript variant 2, mRNA. (from RefSeq NM_020785)
CC2D2A (ENST00000503292.5) at chr4:15469930-15601557 - Homo sapiens coiled-coil and C2 domain containing 2A (CC2D2A), transcript variant 1, mRNA. (from RefSeq NM_001080522)
CC2D2A (ENST00000515124.5) at chr4:15469912-15482259 - Homo sapiens coiled-coil and C2 domain containing 2A (CC2D2A), transcript variant 3, mRNA. (from RefSeq NM_001164720)
TMEM231 (ENST00000568377.5) at chr16:75538151-75556238 - Homo sapiens transmembrane protein 231 (TMEM231), transcript variant 1, mRNA. (from RefSeq NM_001077416)
FGF9 (ENST00000382353.6) at chr13:21671073-21704498 - Homo sapiens fibroblast growth factor 9 (FGF9), mRNA. (from RefSeq NM_002010)
FGF4 (ENST00000168712.3) at chr11:69771022-69775341 - Homo sapiens fibroblast growth factor 4 (FGF4), mRNA. (from RefSeq NM_002007)
TMEM231 (ENST00000258173.11) at chr16:75536741-75556252 - Homo sapiens transmembrane protein 231 (TMEM231), transcript variant 2, mRNA. (from RefSeq NM_001077418)
GREM1 (ENST00000322805.5) at chr15_KI270905v1_alt:4932598-4949251 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 2, mRNA. (from RefSeq NM_001191323)
TCTN3 (ENST00000371217.10) at chr10:95663401-95693927 - Homo sapiens tectonic family member 3 (TCTN3), transcript variant 1, mRNA. (from RefSeq NM_015631)
TCTN3 (ENST00000430368.6) at chr10:95663696-95693926 - Homo sapiens tectonic family member 3 (TCTN3), transcript variant 2, mRNA. (from RefSeq NM_001143973)
GREM1 (ENST00000300177.8) at chr15_KI270905v1_alt:4932598-4949251 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 1, mRNA. (from RefSeq NM_013372)
GLI1 (ENST00000546141.5) at chr12:57460151-57472260 - Homo sapiens GLI family zinc finger 1 (GLI1), transcript variant 3, mRNA. (from RefSeq NM_001167609)
GLI1 (ENST00000543426.5) at chr12:57460135-57472260 - Homo sapiens GLI family zinc finger 1 (GLI1), transcript variant 2, mRNA. (from RefSeq NM_001160045)
GLI1 (ENST00000228682.7) at chr12:57459785-57472268 - Homo sapiens GLI family zinc finger 1 (GLI1), transcript variant 1, mRNA. (from RefSeq NM_005269)
GREM1 (ENST00000651154.1) at chr15:32718004-32745106 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 1, mRNA. (from RefSeq NM_013372)
GREM1 (ENST00000651081.1) at chr15_KQ031389v1_alt:2236418-2263520 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 1, mRNA. (from RefSeq NM_013372)
GREM1 (ENST00000652365.1) at chr15:32718494-32734583 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 4, mRNA. (from RefSeq NM_001368719)
GREM1 (ENST00000651986.1) at chr15_KQ031389v1_alt:2236908-2252997 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 4, mRNA. (from RefSeq NM_001368719)
GREM1 (ENST00000632478.1) at chr15_KQ031389v1_alt:2236418-2251716 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 2, mRNA. (from RefSeq NM_001191323)
TBC1D32 (ENST00000275159.10) at chr6:121080237-121334430 - Homo sapiens TBC1 domain family member 32 (TBC1D32), transcript variant 4, mRNA. (from RefSeq NM_001367760)
GREM1 (ENST00000560830.1) at chr15:32718004-32733302 - Homo sapiens gremlin 1, DAN family BMP antagonist (GREM1), transcript variant 2, mRNA. (from RefSeq NM_001191323)
TULP3 (ENST00000448120.7) at chr12:2890891-2941138 - Homo sapiens TUB like protein 3 (TULP3), transcript variant 1, mRNA. (from RefSeq NM_003324)
PTCH1 (ENST00000437951.5) at chr9:95442984-95516965 - Homo sapiens patched 1 (PTCH1), transcript variant 1a, mRNA. (from RefSeq NM_001083602)
PTCH1 (ENST00000429896.6) at chr9:95444162-95507417 - Homo sapiens patched 1 (PTCH1), transcript variant 1d, mRNA. (from RefSeq NM_001083606)
PTCH1 (ENST00000421141.5) at chr9:95442984-95508040 - Homo sapiens patched 1 (PTCH1), transcript variant 1c', mRNA. (from RefSeq NM_001083605)
PTCH1 (ENST00000418258.5) at chr9:95442984-95507199 - Homo sapiens patched 1 (PTCH1), transcript variant 1e, mRNA. (from RefSeq NM_001083607)
TULP3 (ENST00000397132.6) at chr12:2890907-2941130 - Homo sapiens TUB like protein 3 (TULP3), transcript variant 2, mRNA. (from RefSeq NM_001160408)
PTCH1 (ENST00000375274.6) at chr9:95446159-95516965 - Homo sapiens patched 1 (PTCH1), transcript variant 1a', mRNA. (from RefSeq NM_001083603)
B9D1 (ENST00000268841.10) at chr17:19346946-19362669 - Homo sapiens B9 domain containing 1 (B9D1), transcript variant 6, mRNA. (from RefSeq NM_001321216)
IRX3 (ENST00000329734.4) at chr16:54283304-54286787 - Homo sapiens iroquois homeobox 3 (IRX3), mRNA. (from RefSeq NM_024336)
IFT122 (ENST00000440957.6) at chr3:129440036-129520507 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 7, mRNA. (from RefSeq NM_001280546)
IFT122 (ENST00000431818.6) at chr3:129440036-129520507 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 6, mRNA. (from RefSeq NM_001280545)
IFT122 (ENST00000296266.7) at chr3:129440139-129520345 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 1, mRNA. (from RefSeq NM_052985)
IFT122 (ENST00000507564.5) at chr3:129440212-129520265 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 5, mRNA. (from RefSeq NM_001280541)
IFT122 (ENST00000349441.6) at chr3:129440244-129520351 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 4, mRNA. (from RefSeq NM_052990)
IFT122 (ENST00000348417.6) at chr3:129440254-129520339 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 2, mRNA. (from RefSeq NM_052989)
IFT122 (ENST00000347300.6) at chr3:129440125-129520351 - Homo sapiens intraflagellar transport 122 (IFT122), transcript variant 3, mRNA. (from RefSeq NM_018262)
TTC21B (ENST00000243344.8) at chr2:165873362-165953776 - Homo sapiens tetratricopeptide repeat domain 21B (TTC21B), mRNA. (from RefSeq NM_024753)
SMO (ENST00000249373.8) at chr7:129188633-129213545 - Homo sapiens smoothened, frizzled class receptor (SMO), mRNA. (from RefSeq NM_005631)
B9D1 (ENST00000261499.10) at chr17:19343057-19362723 - Homo sapiens B9 domain containing 1 (B9D1), transcript variant 2, mRNA. (from RefSeq NM_015681)
STK36 (ENST00000392105.7) at chr2:218672069-218702709 - Homo sapiens serine/threonine kinase 36 (STK36), transcript variant 2, mRNA. (from RefSeq NM_001243313)
STK36 (ENST00000295709.8) at chr2:218672086-218702715 - Homo sapiens serine/threonine kinase 36 (STK36), transcript variant 1, mRNA. (from RefSeq NM_015690)
TMEM107 (ENST00000533070.5) at chr17:8173999-8176388 - Homo sapiens transmembrane protein 107 (TMEM107), transcript variant 4, mRNA. (from RefSeq NM_001351279)
PTCH1 (ENST00000331920.10) at chr9:95442980-95508661 - Homo sapiens patched 1 (PTCH1), transcript variant 10, non-coding RNA. (from RefSeq NR_149061)
OLIG2 (ENST00000333337.3) at chr21:33025935-33029196 - Required for oligodendrocyte and motor neuron  specification in the spinal cord, as well as for the development  of somatic motor neurons in the hindbrain. Cooperates with OLIG1  to establish the pMN domain of the embryonic neural tube.  Antagonist of V2 interneuron and of NKX2-2-induced V3 interneuron  development (By similarity). (from UniProt Q13516)
NKX6-1 (ENST00000295886.4) at chr4:84491987-84498450 - Homo sapiens NK6 homeobox 1 (NKX6-1), mRNA. (from RefSeq NM_006168)
STK36 (ENST00000440309.5) at chr2:218672296-218702623 - Homo sapiens serine/threonine kinase 36 (STK36), transcript variant 3, mRNA. (from RefSeq NM_001369423)
MED13L (ENST00000281928.8) at chr12:115953872-116277719 - Homo sapiens mediator complex subunit 13L (MED13L), mRNA. (from RefSeq NM_015335)
HAND2 (ENST00000359562.4) at chr4:173526091-173530229 - Homo sapiens heart and neural crest derivatives expressed 2 (HAND2), mRNA. (from RefSeq NM_021973)
MED12 (ENST00000374080.8) at chrX:71118596-71142450 - Homo sapiens mediator complex subunit 12 (MED12), mRNA. (from RefSeq NM_005120)
SMARCA4 (ENST00000646510.1) at chr19:10960992-11062276 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000646484.1) at chr19:10960932-11062279 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000644737.1) at chr19:10960932-11062468 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000590574.6) at chr19:10961321-11062273 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000541122.6) at chr19:10961081-11061816 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
SMARCA4 (ENST00000444061.8) at chr19:10961110-11062271 - Transcriptional coactivator cooperating with nuclear  hormone receptors to potentiate transcriptional activation.  Component of the CREST-BRG1 complex, a multiprotein complex that  regulates promoter activation by orchestrating a calcium-dependent  release of a repressor complex and a recruitment of an activator  complex. In resting neurons, transcription of the c-FOS promoter  is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC  repressor complex. Upon calcium influx, RB1 is dephosphorylated by  calcineurin, which leads to release of the repressor complex. At  the same time, there is increased recruitment of CREBBP to the  promoter by a CREST-dependent mechanism, which leads to  transcriptional activation. The CREST-BRG1 complex also binds to  the NR2B promoter, and activity-dependent induction of NR2B  expression involves a release of HDAC1 and recruitment of CREBBP.  Belongs to the neural progenitors-specific chromatin remodeling  complex (npBAF complex) and the neuron-specific chromatin  remodeling complex (nBAF complex). During neural development a  switch from a stem/progenitor to a post-mitotic chromatin  remodeling mechanism occurs as neurons exit the cell cycle and  become committed to their adult state. The transition from  proliferating neural stem/progenitor cells to post-mitotic neurons  requires a switch in subunit composition of the npBAF and nBAF  complexes. As neural progenitors exit mitosis and differentiate  into neurons, npBAF complexes which contain ACTL6A/BAF53A and  PHF10/BAF45A, are exchanged for homologous alternative  ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-  specific complexes (nBAF). The npBAF complex is essential for the  self-renewal/proliferative capacity of the multipotent neural stem  cells. The nBAF complex along with CREST plays a role regulating  the activity of genes essential for dendrite growth.  SMARCA4/BAF190A may promote neural stem cell self-  renewal/proliferation by enhancing Notch-dependent proliferative  signals, while concurrently making the neural stem cell  insensitive to SHH-dependent differentiating cues (By similarity).  Also involved in vitamin D-coupled transcription regulation via  its association with the WINAC complex, a chromatin-remodeling  complex recruited by vitamin D receptor (VDR), which is required  for the ligand-bound VDR-mediated transrepression of the CYP27B1  gene. Acts as a corepressor of ZEB1 to regulate E-cadherin  transcription and is required for induction of epithelial-  mesenchymal transition (EMT) by ZEB1. (from UniProt P51532)
OLIG2 (ENST00000382357.4) at chr21:33025935-33029185 - Homo sapiens oligodendrocyte transcription factor 2 (OLIG2), mRNA. (from RefSeq NM_005806)
LMBR1 (ENST00000353442.10) at chr7:156677791-156893183 - Homo sapiens limb development membrane protein 1 (LMBR1), transcript variant 9, non-coding RNA. (from RefSeq NR_146959)
PVR (ENST00000403059.8) at chr19:44643910-44663583 - Homo sapiens PVR cell adhesion molecule (PVR), transcript variant 2, mRNA. (from RefSeq NM_001135768)
PVR (ENST00000344956.8) at chr19:44643798-44663583 - Homo sapiens PVR cell adhesion molecule (PVR), transcript variant 3, mRNA. (from RefSeq NM_001135769)
SMARCA4 (ENST00000645460.1) at chr19:10961043-11062271 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 7, mRNA. (from RefSeq NM_001128848)
SMARCA4 (ENST00000643296.1) at chr19:10960957-11062276 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 4, mRNA. (from RefSeq NM_001128845)
SMARCA4 (ENST00000589677.5) at chr19:10961105-11061816 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 5, mRNA. (from RefSeq NM_001128846)
SMARCA4 (ENST00000429416.8) at chr19:10961001-11062256 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 2, mRNA. (from RefSeq NM_001128844)
SMARCA4 (ENST00000344626.9) at chr19:10960825-11062282 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 3, mRNA. (from RefSeq NM_003072)
SMARCA4 (ENST00000647230.1) at chr19:10960957-11062276 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 6, mRNA. (from RefSeq NM_001128847)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001310462.2 at chr7:155799980-155809163
NM_000193.4 at chr7:155799980-155812463
NR_132318.2 at chr7:155799980-155809163
NR_132319.2 at chr7:155799980-155809163

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011516480.2 at chr7:155802874-155811814
XM_011516479.2 at chr7:155802874-155811814

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

SHH at chr7:155799980-155812463

RefSeq Genes

SHH at chr7:155799980-155809163 - (NM_001310462) sonic hedgehog protein isoform 2
SHH at chr7:155799980-155812463 - (NM_000193) sonic hedgehog protein isoform 1 preproprotein
SHH at chr7:155799980-155809163 - (NR_132319) 
SHH at chr7:155799980-155809163 - (NR_132318) 

Non-Human RefSeq Genes

shh at chr2:219057437-219060359 - (NM_001291255) uncharacterized protein LOC103046459 precursor
SHH at chr7:155802918-155812431 - (NM_204821) sonic hedgehog protein precursor
SHH at chr7:155802900-155812122 - (NM_001244513) sonic hedgehog protein preproprotein
SHH at chr7:155802900-155812122 - (NM_001198553) sonic hedgehog protein precursor
Shh at chr7:155802897-155812438 - (NM_017221) sonic hedgehog protein precursor
Shh at chr7:155801847-155812463 - (NM_009170) sonic hedgehog protein precursor
shh.L at chr7:155802900-155812062 - (NM_001088313) sonic hedgehog protein precursor
shha at chr7:155801855-155812128 - (NM_131063) sonic hedgehog protein A precursor
shhb at chr2:219055525-219060356 - (NM_131199) tiggy-winkle hedgehog protein precursor

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

SHH at chr7:155799980-155812463

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

SHH at chr7:155799980-155812463
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SHH at chr7:155799980-155812463

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SHH at chr7:155799980-155812463
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SHH at chr7:155799986-155812273

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SHH at chr7:155799986-155812273
SHH at chr7:155800039-155809072
SHH at chr7:155800040-155809072
SHH at chr7:155800050-155809072
SHH at chr7:155806582-155807370

International Knockout Mouse Consortium Genes Mapped to Human Genome

Shh_33806 at chr7:155802864-155812273
Shh_33807 at chr7:155802864-155812273
Shh_VG17071 at chr7:155802864-155812273

L38518 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1575  100.0%          7     - 155802865 155812273    L38518     1  1575  1576

Human Unaligned mRNA Search Results

NR_132319 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 4, non-coding RNA.
NR_132318 - Homo sapiens sonic hedgehog signaling molecule (SHH), transcript variant 3, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC166395 - Xenopus tropicalis sonic hedgehog homolog, mRNA (cDNA clone IMAGE:8954861), partial cds.
BC162395 - Danio rerio sonic hedgehog a, mRNA (cDNA clone MGC:194075 IMAGE:9037826), complete cds.
AY460200 - Cyprinus carpio SHH precursor (Shh) mRNA, complete cds.
EU867217 - Maylandia zebra Shh (shh) mRNA, partial cds.
KP055654 - Scyliorhinus canicula Shh (Shh) mRNA, partial cds.
AB007129 - Oryzias latipes mRNA for shh, partial cds.
KM655588 - Danio rerio Shhb mRNA, partial cds.
KM655587 - Danio rerio Shha mRNA, partial cds.
BC078321 - Danio rerio sonic hedgehog b, mRNA (cDNA clone MGC:101003 IMAGE:7149635), complete cds.
AF113403 - Eleutherodactylus coqui sonic hedgehog protein (Shh1) mRNA, partial cds.
AF003532 - Pleurodeles waltl sonic hedgehog-related protein (Pw-shh) mRNA, complete cds.
AB703680 - Eptatretus burgeri ShhA mRNA for sonic hedgehog, partial cds.
KT602897 - Mesocricetus auratus sonic hedgehog (shh) mRNA, partial cds.
AB029748 - Paralichthys olivaceus shh mRNA for sonic hedgehog, complete cds.
AB247650 - Scyliorhinus torazame shh mRNA for sonic hedgehog, partial cds.
AB247651 - Okamejei kenojei shh mRNA for sonic hedgehog, partial cds.
AB449250 - Neoceratodus forsteri shh mRNA for sonic hedgehog protein, partial cds.
AH005584 - Coturnix coturnix sonic hedgehog (shh) mRNA, partial cds.
FJ375320 - Oryzias melastigma sonic hedgehog-like protein (shh) mRNA, partial cds.
JQ717197 - Streptopelia risoria sonic hedghog protein (shh) mRNA, partial cds.
JQ717199 - Taeniopygia guttata sonic hedghog protein (shh) mRNA, partial cds.
KJ867028 - Phreatichthys andruzzii sonic hedgehog (shh) mRNA, partial cds.
AY661431 - Astyanax mexicanus sonic hedgehog precursor (shh) mRNA, complete cds.
AY690624 - Takifugu rubripes sonic hedgehog (shh) mRNA, partial cds.
KT851392 - Maylandia zebra sonic hedgehog (shh) mRNA, partial cds.
MH168557 - Lepomis macrochirus sonic hedgehog (shh) mRNA, partial cds.
U30711 - Danio rerio sonic hedgehog (shh), complete cds.
Z35669 - B.rerio shh mRNA for sonic hedgehog protein.
LC483849 - Takifugu alboplumbeus shh mRNA for sonic hedge hog, partial cds.
DQ152989 - Ovis aries sonic hedgehog-like (SHH) mRNA, partial cds.
HQ437693 - Bos taurus sonic hedgehog (SHH) mRNA, complete cds.
HQ437694 - Canis lupus familiaris sonic hedgehog (SHH) mRNA, complete cds.
HQ437698 - Ceratotherium simum cottoni sonic hedgehog (SHH) mRNA, complete cds.
HQ437699 - Ovis aries sonic hedgehog (SHH) mRNA, complete cds.
HQ437700 - Equus burchellii boehmi sonic hedgehog (SHH) mRNA, complete cds.
HQ437701 - Felis catus sonic hedgehog (SHH) mRNA, complete cds.
M62756 - Parsley S-adenosylhomocysteine hydrolase (SHH) mRNA, complete cds.
M81885 - Parsley S-adenosylhomocysteine hydrolase (SHH) mRNA, complete cds.
AF185635 - Lupinus luteus S-adenosyl-L-homocysteinase (SHH) mRNA, complete cds.
HQ437692 - Varecia variegata variegata sonic hedgehog (SHH) mRNA, complete cds.
HQ437695 - Gorilla gorilla sonic hedgehog (SHH) mRNA, complete cds.
HQ437696 - Pongo pygmaeus sonic hedgehog (SHH) mRNA, complete cds.
HQ437697 - Aotus vociferans sonic hedgehog (SHH) mRNA, complete cds.
HQ437702 - Hylobates lar sonic hedgehog (SHH) mRNA, complete cds.
EU236145 - Causus rhombeatus sonic hedgehog (SHH) mRNA, partial cds.
GU067473 - Sebastiscus marmoratus sonic hedgehog (SHH) mRNA, partial cds.
AY327848 - Trachemys scripta sonic hedgehog (SHH) mRNA, partial cds.
AY370830 - Salmo salar sonic hedgehog-like protein (SHH) mRNA, complete cds.
AB256041 - Suncus murinus Shh mRNA for sonic hedgehog, complete cds.
GU593352 - Monodelphis domestica sonic hedgehog (Shh) mRNA, partial cds.
HM803967 - Myrmecophaga tridactyla sonic hedgehog (Shh) mRNA, partial cds.
HM803968 - Dasypus novemcinctus sonic hedgehog (Shh) mRNA, partial cds.
HM803969 - Tursiops truncatus sonic hedgehog (Shh) mRNA, partial cds.
HM803973 - Pteropus giganteus sonic hedgehog (Shh) mRNA, partial cds.
HM803978 - Giraffa camelopardalis sonic hedgehog (Shh) mRNA, partial cds.
HM803979 - Eschrichtius robustus sonic hedgehog (Shh) mRNA, partial cds.
HM803981 - Hippopotamus amphibius sonic hedgehog (Shh) mRNA, partial cds.
HM803982 - Artibeus sp. JRA-2010 sonic hedgehog (Shh) mRNA, partial cds.
HM803983 - Sus scrofa sonic hedgehog (Shh) mRNA, partial cds.
HM803984 - Monodelphis domestica sonic hedgehog (Shh) mRNA, partial cds.
HM803985 - Oryctolagus cuniculus sonic hedgehog (Shh) mRNA, partial cds.
HM803987 - Rhinolophus ruwenzorii sonic hedgehog (Shh) mRNA, partial cds.
HM803988 - Blarina sp. JRA-2010 sonic hedgehog (Shh) mRNA, partial cds.
HM803989 - Choloepus hoffmanni sonic hedgehog (Shh) mRNA, partial cds.
HM803990 - Physeter catodon sonic hedgehog (Shh) mRNA, partial cds.
HM803992 - Tapirus indicus sonic hedgehog (Shh) mRNA, partial cds.
HM803993 - Tupaia belangeri sonic hedgehog (Shh) mRNA, partial cds.
HM803970 - Varecia rubra sonic hedgehog (Shh) mRNA, partial cds.
HM803971 - Colobus guereza sonic hedgehog (Shh) mRNA, partial cds.
HM803972 - Pygathrix nemaeus sonic hedgehog (Shh) mRNA, partial cds.
HM803974 - Trachypithecus francoisi sonic hedgehog (Shh) mRNA, partial cds.
HM803975 - Galago senegalensis sonic hedgehog (Shh) mRNA, partial cds.
HM803976 - Otolemur garnettii sonic hedgehog (Shh) mRNA, partial cds.
HM803977 - Callithrix geoffroyi sonic hedgehog (Shh) mRNA, partial cds.
HM803980 - Semnopithecus entellus sonic hedgehog (Shh) mRNA, partial cds.
HM803986 - Lemur catta sonic hedgehog (Shh) mRNA, partial cds.
HM803991 - Ateles geoffroyi sonic hedgehog (Shh) mRNA, partial cds.
AB185174 - Meriones unguiculatus Shh mRNA for sonic hedgehog, complete cds.
AY540621 - Meriones unguiculatus sonic hedgehog (Shh) mRNA, partial cds.
BC063087 - Mus musculus sonic hedgehog, mRNA (cDNA clone MGC:69975 IMAGE:6516263), complete cds.
EU664592 - Mus musculus strain C57BL/6J sonic hedgehog (Shh) mRNA, partial cds.
X76290 - M.musculus (C57BL/6J) Shh mRNA.
AB301497 - Polypterus bichir Shh mRNA for sonic hedgehog protein, complete cds.
EF100653 - Chiloscyllium punctatum Sonic hedgehog (Shh) mRNA, partial cds.
EF100659 - Polyodon spathula Sonic hedgehog (Shh) mRNA, partial cds.
EF100667 - Leucoraja erinacea Sonic hedgehog (Shh) mRNA, complete cds.
EF524566 - Trachemys scripta sonic hedgehog (Shh) mRNA, partial cds.
EF527277 - Alligator mississippiensis sonic hedgehog (Shh) mRNA, partial cds.
EU555185 - Python sebae sonic hedgehog (Shh) mRNA, partial cds.
HM807523 - Callorhinchus milii sonic hedgehog (Shh) mRNA, partial cds.
HM991336 - Scyliorhinus canicula sonic hedgehog (Shh) mRNA, partial cds.
HQ336496 - Dromaius novaehollandiae isolate HH7 sonic hedgehog (Shh) mRNA, partial cds.
KF724720 - Pelophylax nigromaculatus sonic hedgehog (Shh) mRNA, partial cds.
KJ129620 - Haplochromis piceatus sonic hedgehog (Shh) mRNA, partial cds.
KJ137003 - Trachemys scripta sonic hedgehog (Shh) mRNA, partial cds.
KJ190307 - Scyliorhinus canicula sonic hedgehog (Shh) mRNA, complete cds.
AY972523 - Ambystoma mexicanum sonic hedgehog (Shh) mRNA, partial cds.
KX809594 - Ambystoma mexicanum sonic hedgehog (Shh) mRNA, complete cds.
KY986708 - Octopus vulgaris sonic hedgehog (Shh) mRNA, complete cds.
LC473499 - Silurus asotus Shh mRNA for sonic hedgehog, partial cds.
KR081936 - UNVERIFIED: Chamaeleo calyptratus Shh-like mRNA, partial sequence.
DQ381247 - Ictalurus punctatus clone SHH08 annexin 6 mRNA, partial cds.
L36074 - Mus musculus (strain B10.SHH1) T-cell receptor antigen (H2-M3), exons 2-4.
AK052447 - Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430024L03 product:SONIC HEDGEHOG PROTEIN PRECURSOR (SHH) (HHG-1) homolog [Mus musculus], full insert sequence.

GeneReviews

SHH at chr7:155799980-155812463