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Gencode Genes

SF3B3 (ENST00000302516.10) at chr16:70523816-70577668 - Homo sapiens splicing factor 3b subunit 3 (SF3B3), mRNA. (from RefSeq NM_012426)
SF3B3 (ENST00000577085.1) at chr16:70523813-70529018 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt I3L4G7)
SF3B3 (ENST00000572365.1) at chr16:70538395-70548512 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000569687.1) at chr16:70526901-70529091 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3QRB2)
SF3B3 (ENST00000568539.1) at chr16:70560350-70564033 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000568291.2) at chr16:70554106-70556597 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000567654.1) at chr16:70523893-70529170 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3QL37)
SF3B3 (ENST00000567635.5) at chr16:70541739-70556206 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3QKV4)
SF3B3 (ENST00000567250.5) at chr16:70550203-70557029 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000566095.6) at chr16:70523791-70528893 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BMB0)
SF3B3 (ENST00000565990.2) at chr16:70569915-70572299 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000564899.1) at chr16:70524550-70526669 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000563739.5) at chr16:70561349-70567541 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000562874.2) at chr16:70576301-70577670 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B3 (ENST00000562722.1) at chr16:70563729-70565720 - splicing factor 3b subunit 3 (from HGNC SF3B3)
SF3B5 (ENST00000367569.4) at chr6:144094884-144095573 - Homo sapiens splicing factor 3b subunit 5 (SF3B5), mRNA. (from RefSeq NM_031287)
SF3B1 (ENST00000409915.8) at chr2:197416891-197435027 - Subunit of the splicing factor SF3B required for 'A'  complex assembly formed by the stable binding of U2 snRNP to the  branchpoint sequence (BPS) in pre-mRNA. Sequence independent  binding of SF3A/SF3B complex upstream of the branch site is  essential, it may anchor U2 snRNP to the pre-mRNA. May also be  involved in the assembly of the 'E' complex. Belongs also to the  minor U12-dependent spliceosome, which is involved in the splicing  of rare class of nuclear pre-mRNA intron. (from UniProt O75533)
DDX42 (ENST00000359353.9) at chr17:63774190-63818398 - ATP-dependent RNA helicase. Binds to partially double-  stranded RNAs (dsRNAs) in order to unwind RNA secondary  structures. Unwinding is promoted in the presence of single-strand  binding proteins. Mediates also RNA duplex formation thereby  displacing the single-strand RNA binding protein. ATP and ADP  modulate its activity: ATP binding and hydrolysis by DDX42  triggers RNA strand separation, whereas the ADP-bound form of the  protein triggers annealing of complementary RNA strands. Involved  in the survival of cells by interacting with TP53BP2 and thereby  counteracting the apoptosis-stimulating activity of TP53BP2.  Relocalizes TP53BP2 to the cytoplasm. (from UniProt Q86XP3)
DDX42 (ENST00000583590.5) at chr17:63773884-63819317 - ATP-dependent RNA helicase. Binds to partially double-  stranded RNAs (dsRNAs) in order to unwind RNA secondary  structures. Unwinding is promoted in the presence of single-strand  binding proteins. Mediates also RNA duplex formation thereby  displacing the single-strand RNA binding protein. ATP and ADP  modulate its activity: ATP binding and hydrolysis by DDX42  triggers RNA strand separation, whereas the ADP-bound form of the  protein triggers annealing of complementary RNA strands. Involved  in the survival of cells by interacting with TP53BP2 and thereby  counteracting the apoptosis-stimulating activity of TP53BP2.  Relocalizes TP53BP2 to the cytoplasm. (from UniProt Q86XP3)
DDX42 (ENST00000389924.7) at chr17:63774170-63819317 - Homo sapiens DEAD-box helicase 42 (DDX42), transcript variant 2, mRNA. (from RefSeq NM_203499)
DDX42 (ENST00000578681.5) at chr17:63773863-63819317 - Homo sapiens DEAD-box helicase 42 (DDX42), transcript variant 1, mRNA. (from RefSeq NM_007372)
SF3B1 (ENST00000335508.10) at chr2:197389784-197435091 - Homo sapiens splicing factor 3b subunit 1 (SF3B1), transcript variant 1, mRNA. (from RefSeq NM_012433)
SF3B1 (ENST00000414963.2) at chr2:197418796-197435079 - Homo sapiens splicing factor 3b subunit 1 (SF3B1), transcript variant 2, mRNA. (from RefSeq NM_001005526)
PHF5A (ENST00000216252.4) at chr22:41459717-41468692 - Homo sapiens PHD finger protein 5A (PHF5A), mRNA. (from RefSeq NM_032758)
SF3B4 (ENST00000271628.9) at chr1:149923317-149927803 - Homo sapiens splicing factor 3b subunit 4 (SF3B4), mRNA. (from RefSeq NM_005850)
SF3B2 (ENST00000322535.11) at chr11:66052364-66069308 - Homo sapiens splicing factor 3b subunit 2 (SF3B2), mRNA. (from RefSeq NM_006842)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_012426.4 at chr16:70523788-70577668

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

SF3B3 at chr16:70523816-70577668

RefSeq Genes

SF3B3 at chr16:70523816-70577668 - (NM_012426) splicing factor 3B subunit 3

Non-Human RefSeq Genes

Sf3b3 at chr16:70523833-70572216 - (NM_001106187) splicing factor 3B subunit 3
sf3b3 at chr16:70526651-70571819 - (NM_213503) splicing factor 3B subunit 3
Sf3b3 at chr16:70526657-70571813 - (NM_167842) splicing factor 3b subunit 3, isoform A
Sf3b3 at chr16:70526657-70571813 - (NM_001274294) splicing factor 3b subunit 3, isoform C
SF3B3 at chr16:70523817-70572160 - (NM_001132028) splicing factor 3B subunit 3
Sf3b3 at chr16:70523824-70572216 - (NM_133953) splicing factor 3B subunit 3
SF3B3 at chr16:70526626-70572195 - (NM_001077851) splicing factor 3B subunit 3
sf3b3 at chr16:70528872-70530830 - (NM_001141594) splicing factor 3B subunit 3
Sf3b3 at chr16:70526651-70571813 - (NM_001159880) splicing factor 3b, subunit 3

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SF3B3 at chr16:70523816-70577668

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523816-70577668
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SF3B3 at chr16:70523788-70577668

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

SF3B3 at chr16:70523788-70577668
SF3B3 at chr16:70523791-70528893
SF3B3 at chr16:70523813-70529018
SF3B3 at chr16:70523893-70529170
SF3B3 at chr16:70524550-70526669
SF3B3 at chr16:70526901-70529091
SF3B3 at chr16:70538395-70548512
SF3B3 at chr16:70541739-70556206
SF3B3 at chr16:70550203-70557029
SF3B3 at chr16:70554106-70556597
SF3B3 at chr16:70560350-70564033
SF3B3 at chr16:70561349-70567541
SF3B3 at chr16:70563729-70565720
SF3B3 at chr16:70569915-70572299
SF3B3 at chr16:70576301-70577670

International Knockout Mouse Consortium Genes Mapped to Human Genome

Sf3b3_71639 at chr16:70523788-70577668

Human Aligned mRNA Search Results

BC000463 - Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone IMAGE:2822705), complete cds.
BC003146 - Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone IMAGE:2822705), complete cds.
BC009780 - Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone IMAGE:4293370), complete cds.
BC068974 - Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone MGC:74943 IMAGE:6168677), complete cds.
AK291768 - Homo sapiens cDNA FLJ78677 complete cds, highly similar to Homo sapiens splicing factor 3b, subunit 3, 130kDa (SF3B3), mRNA.

Non-Human Aligned mRNA Search Results

JP287485 - TSA: Hymenochirus curtipes Hymenochirus_curtipes.contig1525 mRNA sequence.
BC031197 - Mus musculus splicing factor 3b, subunit 3, mRNA (cDNA clone IMAGE:5059683), partial cds.
BC168883 - Rattus norvegicus splicing factor 3b, subunit 3, mRNA (cDNA clone IMAGE:9103110), partial cds.
JT406416 - TSA: Ictalurus punctatus clc_265684 mRNA sequence.
BC047171 - Danio rerio splicing factor 3b, subunit 3, mRNA (cDNA clone MGC:55440 IMAGE:2639628), complete cds.
BC011412 - Mus musculus splicing factor 3b, subunit 3, mRNA (cDNA clone MGC:11945 IMAGE:3600115), complete cds.
BC042580 - Mus musculus splicing factor 3b, subunit 3, mRNA (cDNA clone MGC:36502 IMAGE:5367372), complete cds.
BC139015 - Mus musculus splicing factor 3b, subunit 3, mRNA (cDNA clone MGC:170642 IMAGE:8862037), complete cds.
BC139016 - Mus musculus splicing factor 3b, subunit 3, mRNA (cDNA clone MGC:170643 IMAGE:8862038), complete cds.
BC126518 - Bos taurus splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone MGC:139814 IMAGE:8283009), complete cds.
JU333691 - TSA: Macaca mulatta Mamu_519386 mRNA sequence.
JU474938 - TSA: Macaca mulatta Mamu_365135 mRNA sequence.
JV046593 - TSA: Macaca mulatta Mamu_408524 mRNA sequence.
BT050269 - Salmo salar clone ssal-evf-559-149 Splicing factor 3B subunit 3 putative mRNA, complete cds.
BT058760 - Salmo salar clone ssal-rgf-501-233 Splicing factor 3B subunit 3 putative mRNA, complete cds.