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Gencode Genes

S100A4 (ENST00000368714.1) at chr1:153543621-153550136 - Homodimer. Interacts with PPFIBP1 in a calcium-dependent  mode. (from UniProt P26447)
S100A4 (ENST00000481009.1) at chr1:153543613-153545097 - S100 calcium binding protein A4 (from HGNC S100A4)
S100A4 (ENST00000468373.1) at chr1:153543613-153545806 - S100 calcium binding protein A4 (from HGNC S100A4)
S100A4 (ENST00000368716.9) at chr1:153543621-153545806 - Homo sapiens S100 calcium binding protein A4 (S100A4), transcript variant 1, mRNA. (from RefSeq NM_002961)
S100A4 (ENST00000368715.5) at chr1:153543613-153545063 - Homodimer. Interacts with PPFIBP1 in a calcium-dependent  mode. (from UniProt P26447)
S100A4 (ENST00000354332.8) at chr1:153543613-153545802 - Homo sapiens S100 calcium binding protein A4 (S100A4), transcript variant 2, mRNA. (from RefSeq NM_019554)
HIVEP3 (ENST00000643665.1) at chr1:41506365-41662325 - Plays a role of transcription factor; binds to  recognition signal sequences (Rss heptamer) for somatic  recombination of immunoglobulin and T-cell receptor gene segments;  Binds also to the kappa-B motif of gene such as S100A4, involved  in cell progression and differentiation. Kappa-B motif is a gene  regulatory element found in promoters and enhancers of genes  involved in immunity, inflammation, and growth and that responds  to viral antigens, mitogens, and cytokines. Involvement of HIVEP3  in cell growth is strengthened by the fact that its down-  regulation promotes cell cycle progression with ultimate formation  of multinucleated giant cells. Strongly inhibits TNF-alpha-induced  NF-kappa-B activation; Interferes with nuclear factor NF-kappa-B  by several mechanisms: as transcription factor, by competing for  Kappa-B motif and by repressing transcription in the nucleus;  through a non transcriptional process, by inhibiting nuclear  translocation of RELA by association with TRAF2, an adapter  molecule in the tumor necrosis factor signaling, which blocks the  formation of IKK complex. Interaction with TRAF proteins inhibits  both NF-Kappa-B-mediated and c-Jun N-terminal kinase/JNK-mediated  responses that include apoptosis and proinflammatory cytokine gene  expression. Positively regulates the expression of IL2 in T-cell.  Essential regulator of adult bone formation. (from UniProt Q5T1R4)
PPFIBP1 (ENST00000535047.5) at chr12:27524220-27647977 - May regulate the disassembly of focal adhesions. Did not  bind receptor-like tyrosine phosphatases type 2A. (from UniProt Q86W92)
PPFIBP1 (ENST00000537927.5) at chr12:27524182-27695563 - Homo sapiens PPFIA binding protein 1 (PPFIBP1), transcript variant 3, mRNA. (from RefSeq NM_001198915)
PPFIBP1 (ENST00000318304.12) at chr12:27524206-27695564 - Homo sapiens PPFIA binding protein 1 (PPFIBP1), transcript variant 2, mRNA. (from RefSeq NM_177444)
PPFIBP1 (ENST00000228425.11) at chr12:27524206-27695564 - Homo sapiens PPFIA binding protein 1 (PPFIBP1), transcript variant 1, mRNA. (from RefSeq NM_003622)
PPFIBP1 (ENST00000542629.5) at chr12:27524224-27692882 - Homo sapiens PPFIA binding protein 1 (PPFIBP1), transcript variant 4, mRNA. (from RefSeq NM_001198916)
HIVEP3 (ENST00000372584.5) at chr1:41506365-41918707 - Homo sapiens human immunodeficiency virus type I enhancer binding protein 3 (HIVEP3), transcript variant 2, mRNA. (from RefSeq NM_001127714)
HIVEP3 (ENST00000372583.6) at chr1:41506365-41918922 - Homo sapiens human immunodeficiency virus type I enhancer binding protein 3 (HIVEP3), transcript variant 1, mRNA. (from RefSeq NM_024503)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_019554.2 at chr1:153543619-153545806
NM_002961.2 at chr1:153543622-153545806

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

S100A4 at chr1:153543621-153545806

RefSeq Genes

S100A4 at chr1:153543621-153545806 - (NM_019554) protein S100-A4
S100A4 at chr1:153543621-153545806 - (NM_002961) protein S100-A4

Non-Human RefSeq Genes

S100A4 at chr1:153543759-153544794 - (NM_001252605) protein S100-A4
S100a4 at chr1:153543637-153544794 - (NM_012618) protein S100-A4
S100A4 at chr1:153543624-153544808 - (NM_174595) protein S100-A4
S100a4 at chr1:153543637-153544794 - (NM_011311) protein S100-A4
S100A4 at chr1:153543621-153544807 - (NM_001363554) protein S100-A4 isoform 1
S100A4 at chr1:153543621-153545199 - (NM_001362597) protein S100-A4 isoform 2
S100A4 at chr1:153543621-153545766 - (NM_001003161) protein S100-A4 isoform 1

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543621-153545806
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543621-153545806
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

S100A4 at chr1:153543613-153545063
S100A4 at chr1:153543613-153545097
S100A4 at chr1:153543613-153545802
S100A4 at chr1:153543613-153545806
S100A4 at chr1:153543613-153545885
S100A4 at chr1:153543621-153550136

International Knockout Mouse Consortium Genes Mapped to Human Genome

S100a4_47571 at chr1:153543619-153545806
S100a4_69748 at chr1:153543619-153545806
S100a4_VG11987 at chr1:153543619-153545806

Human Aligned mRNA Search Results

BC000838 - Homo sapiens S100 calcium binding protein A4, mRNA (cDNA clone MGC:5193 IMAGE:3456833), complete cds.
BC016300 - Homo sapiens S100 calcium binding protein A4, mRNA (cDNA clone MGC:13315 IMAGE:4247807), complete cds.
CR450345 - Homo sapiens full open reading frame cDNA clone RZPDo834B127D for gene S100A4, S100 calcium binding protein A4 (calcium protein, calvasculin, metastasin, murine placental homolog); complete cds; without stopcodon.
AK292083 - Homo sapiens cDNA FLJ76571 complete cds, highly similar to Homo sapiens S100 calcium binding protein A4 (calcium protein, calvasculin, metastasin, murine placental homolog) (S100A4), transcript variant 1, mRNA.

Non-Human Aligned mRNA Search Results

BC051214 - Mus musculus S100 calcium binding protein A4, mRNA (cDNA clone MGC:63025 IMAGE:1383390), complete cds.
BC094635 - Mus musculus S100 calcium binding protein A4, mRNA (cDNA clone MGC:106827 IMAGE:1248264), complete cds.
D89056 - Bos taurus mRNA for S100 calcium-binding protein A4, complete cds.
JN122624 - Sus scrofa S100 calcium binding protein A4 (S100A4) mRNA, complete cds.
MH294432 - Canis lupus familiaris isolate #1336 S100 calcium binding protein A4 transcript variant 3 (S100A4) mRNA, complete cds, alternatively spliced.
MH349460 - Canis lupus familiaris S100 calcium binding protein A4 transcript variant 4 (S100A4) mRNA, complete cds, alternatively spliced.
BC103192 - Bos taurus S100 calcium binding protein A4, mRNA (cDNA clone MGC:128646 IMAGE:7986762), complete cds.
AY890438 - Synthetic construct Homo sapiens clone FLH141144.01X S100 calcium binding protein A4 (S100A4) mRNA, complete cds.
AY892860 - Synthetic construct Homo sapiens clone FLH018562.01L S100 calcium binding protein A4 (S100A4) mRNA, partial cds.
AY892899 - Synthetic construct Homo sapiens clone FLH141140.01L S100 calcium binding protein A4 (S100A4) mRNA, partial cds.
AY893453 - Synthetic construct Homo sapiens clone FLH127776.01X S100 calcium binding protein A4 (S100A4) mRNA, complete cds.
AY893900 - Synthetic construct Homo sapiens clone FLH127862.01L S100 calcium binding protein A4 (S100A4) mRNA, partial cds.
JU324819 - TSA: Macaca mulatta Mamu_538133 mRNA sequence.
MK138547 - Canis lupus familiaris isolate #2097 breed Rottweiler S100 calcium binding protein A4 (S100A4) mRNA, partial cds.
MK167976 - Felis catus S100 calcium binding protein A4 (S100A4) mRNA, partial cds and 3' UTR.
MK584633 - Canis lupus familiaris isolate #1336 breed Dobermann S100 calcium binding protein A4 (S100A4) mRNA, complete cds.