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Gencode Genes

RAE1 (ENST00000371242.6) at chr20:57351223-57379211 - Binds mRNA. May function in nucleocytoplasmic transport  and in directly or indirectly attaching cytoplasmic mRNPs to the  cytoskeleton. (from UniProt P78406)
RAE1 (ENST00000527947.5) at chr20:57351252-57375106 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PQ57)
RAE1 (ENST00000492498.5) at chr20:57351274-57378099 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PPG9)
RAE1 (ENST00000462438.1) at chr20:57371134-57378463 - ribonucleic acid export 1 (from HGNC RAE1)
RAE1 (ENST00000452119.1) at chr20:57351577-57356512 - ribonucleic acid export 1 (from HGNC RAE1)
RAE1 (ENST00000429339.5) at chr20:57351510-57366843 - ribonucleic acid export 1 (from HGNC RAE1)
RAE1 (ENST00000411894.5) at chr20:57351510-57366843 - ribonucleic acid export 1 (from HGNC RAE1)
RAE1 (ENST00000395841.7) at chr20:57351255-57379202 - Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 1, mRNA. (from RefSeq NM_003610)
RAE1 (ENST00000395840.6) at chr20:57351544-57379211 - Homo sapiens ribonucleic acid export 1 (RAE1), transcript variant 2, mRNA. (from RefSeq NM_001015885)
CHM (ENST00000357749.7) at chrX:85861180-86047558 - Homo sapiens CHM Rab escort protein (CHM), transcript variant 6, mRNA. (from RefSeq NM_001362519)
CHM (ENST00000615443.1) at chrX:85969087-86047539 - Homo sapiens CHM Rab escort protein (CHM), transcript variant 2, mRNA. (from RefSeq NM_001145414)
NXF1 (ENST00000532297.5) at chr11:62792171-62806302 - Involved in the nuclear export of mRNA species bearing  retroviral constitutive transport elements (CTE) and in the export  of mRNA from the nucleus to the cytoplasm. The NXF1-NXT1  heterodimer is involved in the export of HSP70 mRNA in conjunction  with ALYREF/THOC4 and THOC5. (from UniProt Q9UBU9)
NXF1 (ENST00000531709.6) at chr11:62792123-62805470 - Homo sapiens nuclear RNA export factor 1 (NXF1), transcript variant 2, mRNA. (from RefSeq NM_001081491)
NXF1 (ENST00000294172.7) at chr11:62792130-62805440 - Homo sapiens nuclear RNA export factor 1 (NXF1), transcript variant 1, mRNA. (from RefSeq NM_006362)
NUP98 (ENST00000359171.8) at chr11:3675011-3797792 - Homo sapiens nucleoporin 98 (NUP98), transcript variant 6, mRNA. (from RefSeq NM_001365126)
NUP98 (ENST00000397007.8) at chr11:3711835-3797547 - Homo sapiens nucleoporin 98 (NUP98), transcript variant 3, mRNA. (from RefSeq NM_005387)
NUP98 (ENST00000397004.8) at chr11:3711553-3797541 - Homo sapiens nucleoporin 98 (NUP98), transcript variant 2, mRNA. (from RefSeq NM_139131)
NUP98 (ENST00000355260.7) at chr11:3675799-3797458 - Homo sapiens nucleoporin 98 (NUP98), transcript variant 4, mRNA. (from RefSeq NM_139132)
NUP98 (ENST00000324932.12) at chr11:3675019-3797554 - Homo sapiens nucleoporin 98 (NUP98), transcript variant 12, non-coding RNA. (from RefSeq NR_157591)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_003610.3 at chr20:57351089-57378463
NM_001015885.1 at chr20:57351562-57378463

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017028108.2 at chr20:57351239-57378457
XM_011529087.2 at chr20:57351242-57378112
XM_005260582.2 at chr20:57351242-57378463
XM_005260583.2 at chr20:57351448-57378463
XM_011529088.2 at chr20:57351510-57378463
XM_011529089.1 at chr20:57352897-57378463

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

RAE1 at chr20:57351255-57379202

RefSeq Genes

RAE1 at chr20:57351562-57378463 - (NM_001015885) mRNA export factor
RAE1 at chr20:57351255-57379202 - (NM_003610) mRNA export factor

Non-Human RefSeq Genes

RAE1 at chr20:57351550-57378455 - (NM_001280472) mRNA export factor
RAE1 at chr20:57351889-57378458 - (NM_001284117) mRNA export factor
RAE1 at chr20:57354039-57378100 - (NM_001030868) mRNA export factor
rae1 at chr20:57354712-57378099 - (NM_200998) mRNA export factor
Rae1 at chr20:57354035-57378296 - (NM_001033708) mRNA export factor
RAE1 at chr20:57351343-57378438 - (NM_001015585) mRNA export factor
rae1 at chr20:57354039-57378099 - (NM_001017142) mRNA export factor
RAE1 at chr20:57351760-57378252 - (NM_001105296) mRNA export factor
Rae1 at chr20:57354035-57378297 - (NM_175112) mRNA export factor
RAE1 at chr20:57351271-57379204 - (NM_001131208) mRNA export factor
rae1.L at chr20:57354039-57378099 - (NM_001097949) ribonucleic acid export 1 L homeolog
rae1l at chr20:57354712-57378099 - (NM_001140975) mRNA export factor
Rae1 at chr20:57365356-57374801 - (NM_137753) Rae1
rae1/gle2 at chr20:57354039-57378099 - (NM_001090487) Rae1/Gle2 protein

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351255-57379202
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351255-57379202
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351544-57379211

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

RAE1 at chr20:57351010-57379211
RAE1 at chr20:57351223-57379211
RAE1 at chr20:57351252-57375106
RAE1 at chr20:57351274-57378099
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351510-57366843
RAE1 at chr20:57351544-57379211
RAE1 at chr20:57351577-57356512
RAE1 at chr20:57371134-57378463

Retroposed Genes V9, Including Pseudogenes

RAE1_HUMAN at chr1:241633802-241635779 - (AK312443.1-1)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Rae1_67724 at chr20:57351089-57378463

Human Aligned mRNA Search Results

BC103754 - Homo sapiens RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:117333 IMAGE:6501538), complete cds.
BC106923 - Homo sapiens RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:126076 IMAGE:40032941), complete cds.
BC106924 - Homo sapiens RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:126077 IMAGE:40032942), complete cds.
U84720 - Homo sapiens mRNA export protein (RAE1) mRNA, complete cds.
AK292247 - Homo sapiens cDNA FLJ75499 complete cds, highly similar to Homo sapiens RAE1 RNA export 1 homolog (S. pombe) (RAE1), mRNA.
FW420957 - A use of PSMA7, NEDD1, and RAE1 as the gene expression suppressant.
FW420958 - A use of PSMA7, NEDD1, and RAE1 as the gene expression suppressant.
FW420959 - A use of PSMA7, NEDD1, and RAE1 as the gene expression suppressant.

Non-Human Aligned mRNA Search Results

BC077196 - Xenopus laevis Rae1/Gle2 protein, mRNA (cDNA clone MGC:78912 IMAGE:4175661), complete cds.
AY256464 - Xenopus laevis Rae1/Gle2 (Rae1/Gle2) mRNA, complete cds.
JP016634 - TSA: Mustela putorius furo MPF81011864contig1/1 mRNA sequence.
FJ630507 - Synthetic construct Drosophila melanogaster clone BO06724 encodes Rae1-RA.
FJ635401 - Synthetic construct Drosophila melanogaster clone BS06224 encodes Rae1-RA.
BC060072 - Mus musculus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:73449 IMAGE:5718934), complete cds.
BT021016 - Bos taurus RAE1 RNA export 1 homolog (S. pombe) (RAE1), mRNA, complete cds.
BC111248 - Bos taurus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:134058 IMAGE:8065206), complete cds.
BC059051 - Mus musculus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:69835 IMAGE:6818771), complete cds.
BC104721 - Rattus norvegicus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:125198 IMAGE:7383476), complete cds.
BC105758 - Rattus norvegicus RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:124870 IMAGE:5623260), complete cds.
CR760979 - Xenopus tropicalis finished cDNA, clone TEgg053e05.
BC049445 - Danio rerio RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:56449 IMAGE:5612501), complete cds.
BC065853 - Danio rerio RAE1 RNA export 1 homolog (S. pombe), mRNA (cDNA clone MGC:77723 IMAGE:7000691), complete cds.
AJ277787 - Chironomus tentans mRNA for RAE1 protein.
BT047758 - Salmo salar clone ssal-rgb2-572-249 mRNA export factor putative mRNA, complete cds.
BT125556 - Salmo salar clone ssal-rgb2-501-338 mRNA export factor putative mRNA, complete cds.
JU336775 - TSA: Macaca mulatta Mamu_509310 mRNA sequence.
JU477538 - TSA: Macaca mulatta Mamu_394280 mRNA sequence.
JV045166 - TSA: Macaca mulatta Mamu_425243 mRNA sequence.
AB169253 - Macaca fascicularis testis cDNA, clone: QtsA-18247, similar to human RAE1 RNA export 1 homolog (S. pombe) (RAE1), mRNA, RefSeq: NM_003610.2.
AK156681 - Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830037C24 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.
AK146058 - Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530027N11 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.
AK079383 - Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630054N05 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.
AK035278 - Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530008M12 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.
AK017746 - Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730502H16 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.
AK014325 - Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3230401I12 product:RAE1 RNA export 1 homolog (S. pombe), full insert sequence.