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Gencode Genes

PRPF40A (ENST00000648940.1) at chr2:152656306-152717461 - Homo sapiens pre-mRNA processing factor 40 homolog A (PRPF40A), transcript variant 1, mRNA. (from RefSeq NM_017892)
PRPF40A (ENST00000545856.5) at chr2:152672565-152717407 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F5H578)
PRPF40A (ENST00000493468.6) at chr2:152676399-152717373 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0YG38)
PRPF40A (ENST00000489741.1) at chr2:152694063-152716130 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000486100.1) at chr2:152715995-152717997 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000472760.1) at chr2:152663131-152663855 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000471701.1) at chr2:152657885-152659104 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000471167.1) at chr2:152657955-152659377 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000467114.2) at chr2:152679129-152693111 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000450303.6) at chr2:152694437-152717932 - pre-mRNA processing factor 40 homolog A (from HGNC PRPF40A)
PRPF40A (ENST00000448428.1) at chr2:152679056-152717457 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H7C2N3)
PRPF40A (ENST00000410080.6) at chr2:152651593-152717981 - Homo sapiens pre-mRNA processing factor 40 homolog A (PRPF40A), transcript variant 13, mRNA. (from RefSeq NM_001365605)
PRPF40A (ENST00000354363.10) at chr2:152672548-152717461 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H7BXZ7)
AKAP8L (ENST00000595465.6) at chr19:15380050-15419026 - Homo sapiens A-kinase anchoring protein 8 like (AKAP8L), transcript variant 2, mRNA. (from RefSeq NM_001291478)
AKAP8L (ENST00000397410.10) at chr19:15380050-15418988 - Homo sapiens A-kinase anchoring protein 8 like (AKAP8L), transcript variant 1, mRNA. (from RefSeq NM_014371)
CHD3 (ENST00000358181.8) at chr17:7888791-7912760 - Homo sapiens chromodomain helicase DNA binding protein 3 (CHD3), transcript variant 2, mRNA. (from RefSeq NM_005852)
CHD3 (ENST00000380358.9) at chr17:7884796-7912755 - Homo sapiens chromodomain helicase DNA binding protein 3 (CHD3), transcript variant 3, mRNA. (from RefSeq NM_001005271)
CHD3 (ENST00000330494.12) at chr17:7888789-7912755 - Homo sapiens chromodomain helicase DNA binding protein 3 (CHD3), transcript variant 1, mRNA. (from RefSeq NM_001005273)
WASL (ENST00000223023.5) at chr7:123681943-123749003 - Homo sapiens WASP like actin nucleation promoting factor (WASL), mRNA. (from RefSeq NM_003941)
HTT (ENST00000355072.10) at chr4:3074681-3243960 - Homo sapiens huntingtin (HTT), mRNA. (from RefSeq NM_002111)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_017892.4 at chr2:152651593-152717625
NM_001354432.1 at chr2:152651593-152718012
NM_001354431.1 at chr2:152651593-152718012

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017004458.2 at chr2:152652513-152717405
XM_017004456.2 at chr2:152652513-152717441
XM_024452979.1 at chr2:152652513-152718007
XM_017004459.2 at chr2:152652513-152718007
XM_024452980.1 at chr2:152655325-152717439
XM_017004460.2 at chr2:152655325-152717442
XM_017004453.2 at chr2:152655325-152717855
XM_011511449.3 at chr2:152655325-152717936
XM_011511448.3 at chr2:152655327-152717457
XM_005246676.4 at chr2:152655327-152717855
XM_017004454.1 at chr2:152655327-152717855
XM_017004457.1 at chr2:152655327-152717935
XM_017004461.1 at chr2:152655327-152718007
XM_005246677.4 at chr2:152655525-152717457
XM_011511446.3 at chr2:152655547-152717855
XM_011511447.3 at chr2:152656843-152717855

RefSeq Genes

PRPF40A at chr2:152651596-152718019 - (NM_001354431) pre-mRNA-processing factor 40 homolog A isoform 2
PRPF40A at chr2:152651596-152718019 - (NM_001354432) pre-mRNA-processing factor 40 homolog A isoform 3
PRPF40A at chr2:152651593-152717625 - (NM_017892) pre-mRNA-processing factor 40 homolog A isoform 1
PRPF40A at chr2:152651596-152717461 - (NM_001365596) pre-mRNA-processing factor 40 homolog A isoform 4
PRPF40A at chr2:152651596-152717461 - (NM_001365600) pre-mRNA-processing factor 40 homolog A isoform 8
PRPF40A at chr2:152651596-152717461 - (NM_001365599) pre-mRNA-processing factor 40 homolog A isoform 7
PRPF40A at chr2:152651596-152717461 - (NM_001365598) pre-mRNA-processing factor 40 homolog A isoform 6
PRPF40A at chr2:152651596-152717461 - (NM_001365602) pre-mRNA-processing factor 40 homolog A isoform 10
PRPF40A at chr2:152651596-152717461 - (NM_001365604) pre-mRNA-processing factor 40 homolog A isoform 12
PRPF40A at chr2:152651596-152717461 - (NM_001365601) pre-mRNA-processing factor 40 homolog A isoform 9
PRPF40A at chr2:152651596-152717461 - (NM_001365597) pre-mRNA-processing factor 40 homolog A isoform 5
PRPF40A at chr2:152651596-152717461 - (NM_001365603) pre-mRNA-processing factor 40 homolog A isoform 11
PRPF40A at chr2:152651596-152717461 - (NM_001365605) pre-mRNA-processing factor 40 homolog A isoform 12

Non-Human RefSeq Genes

prpf40a at chr2:152656306-152681327 - (NM_001256941) pre-mRNA-processing factor 40 homolog A isoform 2
prpf40a at chr2:152656306-152681327 - (NM_001256940) pre-mRNA-processing factor 40 homolog A isoform 1
PRPF40A at chr2:152655164-152717403 - (NM_001244573) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:152655579-152717394 - (NM_001106480) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:152654189-152717461 - (NM_018785) pre-mRNA-processing factor 40 homolog A isoform 2
prpf40a at chr2:152656318-152716099 - (NM_198356) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:152654189-152717461 - (NM_001371020) pre-mRNA-processing factor 40 homolog A isoform 7
Prpf40a at chr2:152654189-152717461 - (NM_001371015) pre-mRNA-processing factor 40 homolog A isoform 1
Prpf40a at chr2:152654189-152717461 - (NM_001371019) pre-mRNA-processing factor 40 homolog A isoform 6
Prpf40a at chr2:152654189-152717461 - (NM_001371018) pre-mRNA-processing factor 40 homolog A isoform 5
Prpf40a at chr2:152654189-152717461 - (NM_001371017) pre-mRNA-processing factor 40 homolog A isoform 4
Prpf40a at chr2:152654189-152717461 - (NM_001371016) pre-mRNA-processing factor 40 homolog A isoform 3
prpf40a.S at chr2:152659270-152681336 - (NM_001127820) pre-mRNA processing factor 40 homolog A S homeolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152656306-152717461

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152656306-152717461
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152656306-152717461

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152656306-152717461
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

PRPF40A at chr2:152651593-152717981

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

PRPF40A at chr2:152651593-152717981
PRPF40A at chr2:152657885-152659104
PRPF40A at chr2:152657955-152659377
PRPF40A at chr2:152663131-152663855
PRPF40A at chr2:152672548-152717461
PRPF40A at chr2:152672565-152717407
PRPF40A at chr2:152676399-152717373
PRPF40A at chr2:152679056-152717457
PRPF40A at chr2:152679129-152693111
PRPF40A at chr2:152694063-152716130
PRPF40A at chr2:152694437-152717932
PRPF40A at chr2:152715995-152717997

International Knockout Mouse Consortium Genes Mapped to Human Genome

Prpf40a_101560 at chr2:152651593-152717461
Prpf40a_81233 at chr2:152651593-152717461

Human Aligned mRNA Search Results

BC011788 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4026200), partial cds.
BC027178 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4343048), partial cds.
BC029414 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4733897), partial cds.

Non-Human Aligned mRNA Search Results

BC003318 - Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone IMAGE:3155888), partial cds.
BC030175 - Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone IMAGE:3965278), partial cds.
BC049307 - Danio rerio PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone MGC:56384 IMAGE:5604710), complete cds.
BC156259 - Synthetic construct Mus musculus clone IMAGE:100061646, MGC:190265 PRP40 pre-mRNA processing factor 40 homolog A (yeast) (Prpf40a) mRNA, encodes complete protein.
JT408939 - TSA: Ictalurus punctatus clc_281322 mRNA sequence.
JU335383 - TSA: Macaca mulatta Mamu_502157 mRNA sequence.