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UCSC Genes

PRPF40A (uc002tyh.4) at chr2:153508107-153573975 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
PRPF40A (uc010zcd.1) at chr2:153514403-153573975 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
PRPF40A (uc002tyl.1) at chr2:153532919-153573921 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
PRPF40A (uc002tyj.2) at chr2:153528973-153573975 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
PRPF40A (uc002tyi.2) at chr2:153528973-153573921 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
PRPF40A (uc002tyg.4) at chr2:153508107-153526529 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.
AKAP8L (uc002naw.1) at chr19:15490859-15529833 - Homo sapiens A kinase (PRKA) anchor protein 8-like (AKAP8L), mRNA.
AKAP8L (uc002nay.1) at chr19:15510746-15529833 - Homo sapiens A kinase (PRKA) anchor protein 8-like (AKAP8L), mRNA.
CHD3 (uc002gje.2) at chr17:7792169-7816075 - Homo sapiens chromodomain helicase DNA binding protein 3 (CHD3), transcript variant 1, mRNA.
WASL (uc003vkz.3) at chr7:123321997-123389116 - Homo sapiens Wiskott-Aldrich syndrome-like (WASL), mRNA.
HTT (uc021xkv.1) at chr4:3076408-3245687 - Homo sapiens huntingtin (HTT), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_017892.3 at chr2:153508107-153573975

RefSeq Genes

PRPF40A at chr2:153508112-153574533 - (NM_001354431) pre-mRNA-processing factor 40 homolog A isoform 2
PRPF40A at chr2:153508112-153574533 - (NM_001354432) pre-mRNA-processing factor 40 homolog A isoform 3
PRPF40A at chr2:153508107-153574139 - (NM_017892) pre-mRNA-processing factor 40 homolog A isoform 1
PRPF40A at chr2:153508112-153573975 - (NM_001365596) pre-mRNA-processing factor 40 homolog A isoform 4
PRPF40A at chr2:153508112-153573975 - (NM_001365600) pre-mRNA-processing factor 40 homolog A isoform 8
PRPF40A at chr2:153508112-153573975 - (NM_001365599) pre-mRNA-processing factor 40 homolog A isoform 7
PRPF40A at chr2:153508112-153573975 - (NM_001365598) pre-mRNA-processing factor 40 homolog A isoform 6
PRPF40A at chr2:153508112-153573975 - (NM_001365602) pre-mRNA-processing factor 40 homolog A isoform 10
PRPF40A at chr2:153508112-153573975 - (NM_001365604) pre-mRNA-processing factor 40 homolog A isoform 12
PRPF40A at chr2:153508112-153573975 - (NM_001365601) pre-mRNA-processing factor 40 homolog A isoform 9
PRPF40A at chr2:153508112-153573975 - (NM_001365597) pre-mRNA-processing factor 40 homolog A isoform 5
PRPF40A at chr2:153508112-153573975 - (NM_001365603) pre-mRNA-processing factor 40 homolog A isoform 11
PRPF40A at chr2:153508112-153573975 - (NM_001365605) pre-mRNA-processing factor 40 homolog A isoform 12

Non-Human RefSeq Genes

prpf40a at chr2:153512820-153537841 - (NM_001256941) pre-mRNA-processing factor 40 homolog A isoform 2
prpf40a at chr2:153512820-153537841 - (NM_001256940) pre-mRNA-processing factor 40 homolog A isoform 1
PRPF40A at chr2:153511741-153573917 - (NM_001244573) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:153512093-153573908 - (NM_001106480) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:153510606-153573975 - (NM_018785) pre-mRNA-processing factor 40 homolog A isoform 2
prpf40a at chr2:153512832-153572571 - (NM_198356) pre-mRNA-processing factor 40 homolog A
Prpf40a at chr2:153510606-153573975 - (NM_001371020) pre-mRNA-processing factor 40 homolog A isoform 7
Prpf40a at chr2:153510606-153573975 - (NM_001371015) pre-mRNA-processing factor 40 homolog A isoform 1
Prpf40a at chr2:153510606-153573975 - (NM_001371019) pre-mRNA-processing factor 40 homolog A isoform 6
Prpf40a at chr2:153510606-153573975 - (NM_001371018) pre-mRNA-processing factor 40 homolog A isoform 5
Prpf40a at chr2:153510606-153573975 - (NM_001371017) pre-mRNA-processing factor 40 homolog A isoform 4
Prpf40a at chr2:153510606-153573975 - (NM_001371016) pre-mRNA-processing factor 40 homolog A isoform 3
prpf40a.S at chr2:153515608-153537850 - (NM_001127820) pre-mRNA processing factor 40 homolog A S homeolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153512820-153573975

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153512820-153573975
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

PRPF40A at chr2:153508107-153574495

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

PRPF40A at chr2:153508107-153574495

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

PRPF40A at chr2:153508107-153574495

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from GENCODE Version 19

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153572509-153574511

Comprehensive Gene Annotation Set from GENCODE Version 19

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153572509-153574511

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153572509-153574511

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153512544-153573908
PRPF40A at chr2:153512820-153573975
PRPF40A at chr2:153514508-153573975
PRPF40A at chr2:153572509-153574511

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

PRPF40A at chr2:153508107-153574495
PRPF40A at chr2:153512544-153573908
PRPF40A at chr2:153512820-153573975
PRPF40A at chr2:153514399-153515618
PRPF40A at chr2:153514469-153515891
PRPF40A at chr2:153514508-153573975
PRPF40A at chr2:153519645-153520369
PRPF40A at chr2:153529062-153573975
PRPF40A at chr2:153529079-153573921
PRPF40A at chr2:153532913-153573887
PRPF40A at chr2:153535570-153573971
PRPF40A at chr2:153535643-153549625
PRPF40A at chr2:153550577-153572644
PRPF40A at chr2:153550951-153574446
PRPF40A at chr2:153572509-153574511

International Knockout Mouse Consortium Genes Mapped to Human Genome

Prpf40a_101560 at chr2:153508107-153573975
Prpf40a_81233 at chr2:153508107-153573975

Human Aligned mRNA Search Results

BC011788 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4026200), partial cds.
BC027178 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4343048), partial cds.
BC029414 - Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae), mRNA (cDNA clone IMAGE:4733897), partial cds.

Non-Human Aligned mRNA Search Results

BC003318 - Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone IMAGE:3155888), partial cds.
BC030175 - Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone IMAGE:3965278), partial cds.
BC049307 - Danio rerio PRP40 pre-mRNA processing factor 40 homolog A (yeast), mRNA (cDNA clone MGC:56384 IMAGE:5604710), complete cds.
BC156259 - Synthetic construct Mus musculus clone IMAGE:100061646, MGC:190265 PRP40 pre-mRNA processing factor 40 homolog A (yeast) (Prpf40a) mRNA, encodes complete protein.
JT408939 - TSA: Ictalurus punctatus clc_281322 mRNA sequence.
JU335383 - TSA: Macaca mulatta Mamu_502157 mRNA sequence.

Ensembl Genes

PRPF40A at chr2:153550951-153574446 - (ENST00000450303)
PRPF40A at chr2:153535643-153549625 - (ENST00000467114)
PRPF40A at chr2:153532913-153573887 - (ENST00000493468)
PRPF40A at chr2:153529062-153573975 - (ENST00000354363)
PRPF40A at chr2:153514469-153515891 - (ENST00000471167)
PRPF40A at chr2:153508107-153574495 - (ENST00000410080)
PRPF40A at chr2:153514399-153515618 - (ENST00000471701)
PRPF40A at chr2:153519645-153520369 - (ENST00000472760)
PRPF40A at chr2:153529079-153573921 - (ENST00000545856)
PRPF40A at chr2:153535570-153573971 - (ENST00000448428)
PRPF40A at chr2:153550577-153572644 - (ENST00000489741)
PRPF40A at chr2:153572509-153574511 - (ENST00000486100)

Vega Protein-Coding Annotations

OTTHUMT00000333559 at chr2:153508107-153574495
OTTHUMT00000333572 at chr2:153514399-153515618
OTTHUMT00000333571 at chr2:153514469-153515891
OTTHUMT00000333570 at chr2:153519645-153520369
OTTHUMT00000333573 at chr2:153529062-153573975
OTTHUMT00000333566 at chr2:153535570-153573971
OTTHUMT00000333562 at chr2:153535570-153573953
OTTHUMT00000333567 at chr2:153535643-153549625
OTTHUMT00000333564 at chr2:153550577-153572644
OTTHUMT00000333560 at chr2:153550951-153574446
OTTHUMT00000333561 at chr2:153572509-153574511