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Gencode Genes

PDLIM1 (ENST00000329399.7) at chr10:95237572-95291003 - Homo sapiens PDZ and LIM domain 1 (PDLIM1), mRNA. (from RefSeq NM_020992)
PDLIM1 (ENST00000493949.1) at chr10:95263876-95273406 - PDZ and LIM domain 1 (from HGNC PDLIM1)
PDLIM1 (ENST00000492511.1) at chr10:95237940-95238848 - PDZ and LIM domain 1 (from HGNC PDLIM1)
PDLIM1 (ENST00000490391.1) at chr10:95238634-95247620 - PDZ and LIM domain 1 (from HGNC PDLIM1)
PDLIM1 (ENST00000477757.5) at chr10:95238010-95291012 - PDZ and LIM domain 1 (from HGNC PDLIM1)
PDIK1L (ENST00000444713.5) at chr1:26111173-26122124 - PDLIM1 interacting kinase 1 like (from HGNC PDIK1L)
PDIK1L (ENST00000619836.4) at chr1:26111165-26125530 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 2, mRNA. (from RefSeq NM_001243532)
PDIK1L (ENST00000374271.8) at chr1:26111837-26125543 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 3, mRNA. (from RefSeq NM_001243533)
PDIK1L (ENST00000374269.2) at chr1:26111824-26125555 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 1, mRNA. (from RefSeq NM_152835)
STK35 (ENST00000381482.8) at chr20:2101827-2148555 - Homo sapiens serine/threonine kinase 35 (STK35), mRNA. (from RefSeq NM_080836)
PDLIM1P4 (ENST00000504327.1) at chr3:98782188-98783193 - PDZ and LIM domain 1 pseudogene 4 (from HGNC PDLIM1P4)
PDLIM1P1 (ENST00000604187.1) at chr14:50050368-50051336 - PDZ and LIM domain 1 pseudogene 1 (from HGNC PDLIM1P1)
PDLIM1P2 (ENST00000582923.1) at chr17:21444833-21445439 - PDZ and LIM domain 1 pseudogene 2 (from HGNC PDLIM1P2)
PDLIM1P3 (ENST00000582370.1) at chr17:27002661-27003259 - PDZ and LIM domain 1 pseudogene 3 (from HGNC PDLIM1P3)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_020992.3 at chr10:95237568-95291148

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011540330.1 at chr10:95237569-95291006

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

PDLIM1 at chr10:95237572-95291003

RefSeq Genes

PDLIM1 at chr10:95237573-95291003 - (NM_020992) PDZ and LIM domain protein 1

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

PDLIM1 interacting kinase 1 like, transcript variant 1 at chr1:26111777-26125548 - (NM_152835.4)
PDLIM1 interacting kinase 1 like, transcript variant 2 at chr1:26111165-26125548 - (NM_001243532.1)
PDLIM1 interacting kinase 1 like, transcript variant 3 at chr1:26111777-26125548 - (NM_001243533.1)

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

PDLIM1 interacting kinase 1 like, transcript variant X2 at chr1:26109131-26125543 - (XM_006710381.4)
PDLIM1 interacting kinase 1 like, transcript variant X1 at chr1:26111213-26125460 - (XM_005245743.4)
PDLIM1 interacting kinase 1 like, transcript variant X3 at chr1:26111804-26125543 - (XM_011540792.2)

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

PDLIM1P1 at chr14:50050289-50051686

Non-Human RefSeq Genes

pdlim1 at chr10:95237919-95271784 - (NM_203599) PDZ and LIM domain protein 1
PDLIM1 at chr10:95237917-95290953 - (NM_001315778) PDZ and LIM domain protein 1
PDLIM1 at chr10:95237577-95290956 - (NM_001035455) PDZ and LIM domain protein 1
Pdlim1 at chr10:95237827-95290918 - (NM_016861) PDZ and LIM domain protein 1
pdlim1 at chr10:95237925-95290894 - (NM_001017870) PDZ and LIM domain protein 1
Pdlim1 at chr10:95237925-95290918 - (NM_017365) PDZ and LIM domain protein 1
pdlim1.L at chr10:95237919-95290888 - (NM_001089208) PDZ and LIM domain 1 L homeolog
pdlim1.S at chr10:95237925-95290888 - (NM_001088957) PDZ and LIM domain 1 S homeolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

PDLIM1 at chr10:95237572-95291003

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

PDLIM1 at chr10:95237572-95291003
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

PDLIM1 at chr10:95237572-95291024

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

PDLIM1 at chr10:95237572-95291024
PDLIM1 at chr10:95237940-95238848
PDLIM1 at chr10:95238010-95291012
PDLIM1 at chr10:95238634-95247620
PDLIM1 at chr10:95263876-95273406

Retroposed Genes V9, Including Pseudogenes

PDLIM1 at chr3:98782213-98783576 - (NM_020992.3-7)
PDLIM1 at chr17:21730719-21731344 - (NM_020992.3-5)
PDLIM1 at chr14:50050289-50051686 - (NM_020992.3-3)
PDLIM1 at chr17:21444836-21445465 - (NM_020992.3-4)
PDLIM1 at chr17:27002658-27003266 - (NM_020992.3-6)

Human Aligned mRNA Search Results

BC028713 - Homo sapiens PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:27093 IMAGE:4828997), complete cds.
BC000915 - Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:5344 IMAGE:2985229), complete cds.
BC018755 - Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:31954 IMAGE:3610938), complete cds.
BC035401 - Homo sapiens PDLIM1 interacting kinase 1 like, mRNA (cDNA clone IMAGE:4821035).
AK314792 - Homo sapiens cDNA, FLJ95664, highly similar to Homo sapiens PDZ and LIM domain 1 (elfin) (PDLIM1), mRNA.

Non-Human Aligned mRNA Search Results

JP015166 - TSA: Mustela putorius furo MPF81010392contig1/2 mRNA sequence.
JP015167 - TSA: Mustela putorius furo MPF81010393contig2/2 mRNA sequence.
BC004809 - Mus musculus PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:5634 IMAGE:3588132), complete cds.
BC058514 - Mus musculus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:66688 IMAGE:6821637), complete cds.
CR761751 - Xenopus tropicalis finished cDNA, clone TGas104h05.
MG133512 - Synthetic construct Xenopus tropicalis clone IMAGE:5385031 PDZ and LIM domain 1 (pdlim1) gene, encodes complete protein.
BC061431 - Xenopus tropicalis PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:76041 IMAGE:5385031), complete cds.
BC092978 - Danio rerio PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:110681 IMAGE:7167554), complete cds.
BC072465 - Rattus norvegicus PDZ and LIM domain 1, mRNA (cDNA clone MGC:91751 IMAGE:7100446), complete cds.
JT408962 - TSA: Ictalurus punctatus clc_281407 mRNA sequence.
JX569753 - Sus scrofa PDZ and LIM domain protein 1 (PDLIM1) mRNA, complete cds.
BC146213 - Bos taurus PDZ and LIM domain 1, mRNA (cDNA clone MGC:166382 IMAGE:8474203), complete cds.
BT020979 - Bos taurus PDZ and LIM domain 1 (elfin) (PDLIM1), mRNA, complete cds.
JU326893 - TSA: Macaca mulatta Mamu_535980 mRNA sequence.
JU477770 - TSA: Macaca mulatta Mamu_385803 mRNA sequence.
JV048647 - TSA: Macaca mulatta Mamu_422986 mRNA sequence.
JV636445 - TSA: Macaca mulatta Mamu_472898 mRNA sequence.
BC027088 - Mus musculus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:36635 IMAGE:5358000), complete cds.
BC112655 - Bos taurus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone IMAGE:8023839), partial cds.