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UCSC Genes

PDLIM1 (uc001kkh.4) at chr10:96997325-97050905 - Homo sapiens PDZ and LIM domain 1 (PDLIM1), mRNA.
PDIK1L (uc009vsb.3) at chr1:26438268-26452039 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 1, mRNA.
PDIK1L (uc010oew.2) at chr1:26437656-26452039 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 2, mRNA.
PDIK1L (uc001blj.4) at chr1:26438268-26452039 - Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), transcript variant 3, mRNA.
STK35 (uc010zpu.2) at chr20:2083414-2129198 - Homo sapiens serine/threonine kinase 35 (STK35), mRNA.
STK35 (uc002wfw.4) at chr20:2082528-2129198 - Homo sapiens serine/threonine kinase 35 (STK35), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_020992.3 at chr10:96997325-97050905

RefSeq Genes

PDLIM1 at chr10:96997330-97050760 - (NM_020992) PDZ and LIM domain protein 1

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

PDLIM1 interacting kinase 1 like, transcript variant 3 at chr1:26438268-26452039 - (NM_001243533.1)
PDLIM1 interacting kinase 1 like, transcript variant 2 at chr1:26437656-26452039 - (NM_001243532.1)
PDLIM1 interacting kinase 1 like, transcript variant 1 at chr1:26438268-26452039 - (NM_152835.4)

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

PDLIM1P1 at chr14:50517007-50518404

Non-Human RefSeq Genes

pdlim1 at chr10:96997676-97031541 - (NM_203599) PDZ and LIM domain protein 1
PDLIM1 at chr10:96997674-97050710 - (NM_001315778) PDZ and LIM domain protein 1
PDLIM1 at chr10:96997335-97050713 - (NM_001035455) PDZ and LIM domain protein 1
Pdlim1 at chr10:96997584-97050675 - (NM_016861) PDZ and LIM domain protein 1
pdlim1 at chr10:96997682-97050651 - (NM_001017870) PDZ and LIM domain protein 1
Pdlim1 at chr10:96997682-97050675 - (NM_017365) PDZ and LIM domain protein 1
pdlim1.L at chr10:96997676-97050645 - (NM_001089208) PDZ and LIM domain 1 L homeolog
pdlim1.S at chr10:96997682-97050645 - (NM_001088957) PDZ and LIM domain 1 S homeolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

PDLIM1 at chr10:96997329-97050760

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

PDLIM1 at chr10:96997329-97050760
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

PDLIM1 at chr10:96997329-97050781

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

PDLIM1 at chr10:96997329-97050781

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

PDLIM1 at chr10:96997329-97050781

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from GENCODE Version 19

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997767-97050769

Comprehensive Gene Annotation Set from GENCODE Version 19

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997767-97050769

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997767-97050769

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997767-97050769

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

PDLIM1 at chr10:96997329-97050781
PDLIM1 at chr10:96997697-96998605
PDLIM1 at chr10:96997767-97050769
PDLIM1 at chr10:96998391-97007377
PDLIM1 at chr10:97023633-97033163

Retroposed Genes V5, Including Pseudogenes

PDLIM1 at chr3:98501057-98502420 - (NM_020992.3-6)
PDLIM1 at chr17:21348148-21348777 - (NM_020992.3-4)
PDLIM1 at chr14:50517007-50518404 - (NM_020992.3-3)
PDLIM1 at chr17:25329684-25330292 - (NM_020992.3-5)

Human Aligned mRNA Search Results

BC028713 - Homo sapiens PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:27093 IMAGE:4828997), complete cds.
BC000915 - Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:5344 IMAGE:2985229), complete cds.
BC018755 - Homo sapiens PDZ and LIM domain 1, mRNA (cDNA clone MGC:31954 IMAGE:3610938), complete cds.
BC035401 - Homo sapiens PDLIM1 interacting kinase 1 like, mRNA (cDNA clone IMAGE:4821035).
AK314792 - Homo sapiens cDNA, FLJ95664, highly similar to Homo sapiens PDZ and LIM domain 1 (elfin) (PDLIM1), mRNA.

Non-Human Aligned mRNA Search Results

JP015166 - TSA: Mustela putorius furo MPF81010392contig1/2 mRNA sequence.
JP015167 - TSA: Mustela putorius furo MPF81010393contig2/2 mRNA sequence.
BC004809 - Mus musculus PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:5634 IMAGE:3588132), complete cds.
BC058514 - Mus musculus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:66688 IMAGE:6821637), complete cds.
CR761751 - Xenopus tropicalis finished cDNA, clone TGas104h05.
MG133512 - Synthetic construct Xenopus tropicalis clone IMAGE:5385031 PDZ and LIM domain 1 (pdlim1) gene, encodes complete protein.
BC061431 - Xenopus tropicalis PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:76041 IMAGE:5385031), complete cds.
BC092978 - Danio rerio PDZ and LIM domain 1 (elfin), mRNA (cDNA clone MGC:110681 IMAGE:7167554), complete cds.
BC072465 - Rattus norvegicus PDZ and LIM domain 1, mRNA (cDNA clone MGC:91751 IMAGE:7100446), complete cds.
JT408962 - TSA: Ictalurus punctatus clc_281407 mRNA sequence.
JX569753 - Sus scrofa PDZ and LIM domain protein 1 (PDLIM1) mRNA, complete cds.
BC146213 - Bos taurus PDZ and LIM domain 1, mRNA (cDNA clone MGC:166382 IMAGE:8474203), complete cds.
BT020979 - Bos taurus PDZ and LIM domain 1 (elfin) (PDLIM1), mRNA, complete cds.
JU326893 - TSA: Macaca mulatta Mamu_535980 mRNA sequence.
JU477770 - TSA: Macaca mulatta Mamu_385803 mRNA sequence.
JV048647 - TSA: Macaca mulatta Mamu_422986 mRNA sequence.
JV636445 - TSA: Macaca mulatta Mamu_472898 mRNA sequence.
BC027088 - Mus musculus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone MGC:36635 IMAGE:5358000), complete cds.
BC112655 - Bos taurus PDLIM1 interacting kinase 1 like, mRNA (cDNA clone IMAGE:8023839), partial cds.

Ensembl Genes

PDLIM1P3 at chr17:25329687-25330285 - (ENST00000582370)
PDLIM1P1 at chr14:50517086-50518054 - (ENST00000604187)
PDLIM1 at chr10:96998391-97007377 - (ENST00000490391)
PDLIM1 at chr10:96997697-96998605 - (ENST00000492511)
PDLIM1 at chr10:96997329-97050781 - (ENST00000329399)
PDLIM1 at chr10:96997767-97050769 - (ENST00000477757)
PDLIM1 at chr10:97023633-97033163 - (ENST00000493949)
PDLIM1P2 at chr17:21348145-21348751 - (ENST00000582923)
PDLIM1P4 at chr3:98501032-98502037 - (ENST00000504327)

Vega Protein-Coding Annotations

OTTHUMT00000049508 at chr10:96997329-97050781
OTTHUMT00000049511 at chr10:96997697-96998605
OTTHUMT00000049509 at chr10:96997767-97050769
OTTHUMT00000049512 at chr10:96998391-97007377
OTTHUMT00000049510 at chr10:97023633-97033163