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Gencode Genes

NUP54 (ENST00000264883.8) at chr4:76114664-76148397 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 1, mRNA. (from RefSeq NM_017426)
NUP54 (ENST00000515460.5) at chr4:76134176-76148377 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000514987.5) at chr4:76115206-76148397 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 2, mRNA. (from RefSeq NM_001278603)
NUP54 (ENST00000514901.5) at chr4:76144130-76148398 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt D6RAH0)
NUP54 (ENST00000514313.1) at chr4:76132320-76134311 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000514307.5) at chr4:76136188-76148202 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000513352.1) at chr4:76144197-76148397 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt D6RB65)
NUP54 (ENST00000513248.1) at chr4:76115438-76118437 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000512151.5) at chr4:76115301-76148397 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 3, non-coding RNA. (from RefSeq NR_103780)
NUP54 (ENST00000510884.5) at chr4:76144184-76148200 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000510569.5) at chr4:76144149-76145820 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000508604.5) at chr4:76114659-76130851 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000508583.5) at chr4:76144130-76148434 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000508465.5) at chr4:76115104-76130701 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000507257.5) at chr4:76114659-76148416 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 4, non-coding RNA. (from RefSeq NR_103781)
NUP54 (ENST00000506098.5) at chr4:76136321-76147821 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000504173.1) at chr4:76124580-76148444 - nucleoporin 54 (from HGNC NUP54)
NUP54 (ENST00000502850.5) at chr4:76115087-76148405 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 5, non-coding RNA. (from RefSeq NR_103782)
NUP58 (ENST00000463407.5) at chr13:25301631-25336340 - Component of the nuclear pore complex, a complex  required for the trafficking across the nuclear membrane (By  similarity). (from UniProt Q9BVL2)
NUP62 (ENST00000596217.1) at chr19:49908106-49929504 - Essential component of the nuclear pore complex. The N-  terminal is probably involved in nucleocytoplasmic transport. The  C-terminal is probably involved in protein-protein interaction via  coiled-coil formation and may function in anchorage of p62 to the  pore complex. (from UniProt P37198)
NUP58 (ENST00000381718.7) at chr13:25301633-25340718 - Homo sapiens nucleoporin 58 (NUP58), transcript variant 2, mRNA. (from RefSeq NM_001008564)
NUP58 (ENST00000381736.8) at chr13:25301625-25342421 - Homo sapiens nucleoporin 58 (NUP58), transcript variant 1, mRNA. (from RefSeq NM_014089)
NUP93 (ENST00000542526.5) at chr16:56783456-56850286 - Homo sapiens nucleoporin 93 (NUP93), transcript variant 3, mRNA. (from RefSeq NM_001242796)
NUP93 (ENST00000564887.5) at chr16:56781658-56844764 - Homo sapiens nucleoporin 93 (NUP93), transcript variant 2, mRNA. (from RefSeq NM_001242795)
NUP93 (ENST00000308159.10) at chr16:56730129-56850286 - Homo sapiens nucleoporin 93 (NUP93), transcript variant 1, mRNA. (from RefSeq NM_014669)
NUP62 (ENST00000422090.2) at chr19:49906825-49929744 - Homo sapiens nucleoporin 62 (NUP62), transcript variant 3, mRNA. (from RefSeq NM_153718)
NUP62 (ENST00000597029.5) at chr19:49908105-49929443 - Homo sapiens nucleoporin 62 (NUP62), transcript variant 1, mRNA. (from RefSeq NM_153719)
NUP62 (ENST00000352066.7) at chr19:49907543-49929731 - Homo sapiens nucleoporin 62 (NUP62), transcript variant 2, mRNA. (from RefSeq NM_016553)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NR_103782.1 at chr4:76114659-76148515
NM_017426.3 at chr4:76114659-76148515
NR_103780.1 at chr4:76114659-76148515
NR_103781.1 at chr4:76114659-76148515
NM_001278603.1 at chr4:76114659-76148515

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017008295.2 at chr4:76114664-76148249
XM_011532033.3 at chr4:76114664-76148434
XR_001741237.2 at chr4:76114664-76148434
XR_001741238.2 at chr4:76114664-76148434

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

NUP54 at chr4:76114664-76148397

RefSeq Genes

NUP54 at chr4:76114659-76148515 - (NR_103780) 
NUP54 at chr4:76114659-76148515 - (NR_103781) 
NUP54 at chr4:76114659-76148515 - (NR_103782) 
NUP54 at chr4:76114659-76148515 - (NM_001278603) nucleoporin p54 isoform 2
NUP54 at chr4:76114664-76148397 - (NM_017426) nucleoporin p54 isoform 1

Non-Human RefSeq Genes

nup54 at chr4:76115405-76144474 - (NM_001140250) nucleoporin p54
nup54 at chr4:76115357-76144474 - (NM_001017349) nucleoporin p54
nup54 at chr4:76115405-76136383 - (NM_001001948) nucleoporin p54
NUP54 at chr4:76114706-76148396 - (NM_001075285) nucleoporin p54
nup54.S at chr4:76115366-76148392 - (NM_001089733) nucleoporin 54kDa S homeolog
Nup54 at chr4:76114757-76148386 - (NM_001359995) nuclear pore complex protein Nup54 isoform 1
Nup54 at chr4:76114757-76148386 - (NM_017361) nuclear pore complex protein Nup54
Nup54 at chr4:76114757-76148386 - (NM_183392) nuclear pore complex protein Nup54 isoform 2

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NUP54 at chr4:76114664-76148397
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148397
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115206-76148397

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NUP54 at chr4:76114659-76130851
NUP54 at chr4:76114659-76148416
NUP54 at chr4:76114664-76148515
NUP54 at chr4:76115087-76148405
NUP54 at chr4:76115104-76130701
NUP54 at chr4:76115206-76148397
NUP54 at chr4:76115301-76148397
NUP54 at chr4:76115438-76118437
NUP54 at chr4:76124580-76148444
NUP54 at chr4:76132320-76134311
NUP54 at chr4:76134176-76148377
NUP54 at chr4:76136188-76148202
NUP54 at chr4:76136321-76147821
NUP54 at chr4:76144130-76148398
NUP54 at chr4:76144130-76148434
NUP54 at chr4:76144149-76145820
NUP54 at chr4:76144184-76148200
NUP54 at chr4:76144197-76148397

International Knockout Mouse Consortium Genes Mapped to Human Genome

Nup54_34059 at chr4:76114664-76148502
Nup54_34060 at chr4:76114664-76148502
Nup54_82622 at chr4:76114664-76148502

Alias of STS Marker

NUP54 at chr4:76014889-76215052 - (RH41401)

Human Aligned mRNA Search Results

AF157322 - Homo sapiens nucleoporin p54 protein (NUP54) mRNA, complete cds.
AK315160 - Homo sapiens cDNA, FLJ96134, Homo sapiens nucleoporin 54kDa (NUP54), mRNA.

Human Unaligned mRNA Search Results

NR_103780 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 3, non-coding RNA.
NR_103781 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 4, non-coding RNA.
NR_103782 - Homo sapiens nucleoporin 54 (NUP54), transcript variant 5, non-coding RNA.

Non-Human Aligned mRNA Search Results

JX993586 - Xenopus laevis Nup54 mRNA, complete cds.
JU175309 - TSA: Crotalus adamanteus Cadam_Nup54, mRNA sequence.
CR848625 - Xenopus tropicalis finished cDNA, clone TGas114o17.
BC135328 - Xenopus tropicalis nucleoporin 54, mRNA (cDNA clone MGC:121376 IMAGE:7606162), complete cds.
BC068114 - Mus musculus nucleoporin 54, mRNA (cDNA clone MGC:92978 IMAGE:5707888), complete cds.
BC078858 - Rattus norvegicus nucleoporin 54, mRNA (cDNA clone MGC:93519 IMAGE:7134682), complete cds.
BC114015 - Bos taurus nucleoporin 54kDa, mRNA (cDNA clone MGC:137666 IMAGE:8009279), complete cds.
JU335025 - TSA: Macaca mulatta Mamu_523069 mRNA sequence.
JU476027 - TSA: Macaca mulatta Mamu_381818 mRNA sequence.
JV047395 - TSA: Macaca mulatta Mamu_437178 mRNA sequence.
BT045518 - Salmo salar clone ssal-rgf-523-346 Nucleoporin p54 putative mRNA, complete cds.
AB169303 - Macaca fascicularis testis cDNA, clone: QtsA-18807, similar to human nucleoporin 54kDa (NUP54), mRNA, RefSeq: NM_017426.2.

Pfam Domains in UCSC Genes

Nup54 at chr4:76117748-76132532