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Gencode Genes

NGFR (ENST00000172229.8) at chr17:49495293-49515008 - Homo sapiens nerve growth factor receptor (NGFR), mRNA. (from RefSeq NM_002507)
NGFR (ENST00000509200.5) at chr17:49496624-49506385 - nerve growth factor receptor (from HGNC NGFR)
NGFR (ENST00000504201.1) at chr17:49497391-49513372 - Low affinity receptor which can bind to NGF, BDNF, NT-3,  and NT-4. Can mediate cell survival as well as cell death of  neural cells. (from UniProt P08138)
PTPN13 (ENST00000511467.1) at chr4:86635252-86815149 - Tyrosine phosphatase which regulates negatively FAS-  induced apoptosis and NGFR-mediated pro-apoptotic signaling. (from UniProt Q12923)
MAGED1 (ENST00000375722.5) at chrX:51893533-51902354 - Involved in the apoptotic response after nerve growth  factor (NGF) binding in neuronal cells. Binds NGFR/p75NTR and  antagonizes its association with NTRK1/TrkA, inhibits cell cycle  progression, and facilitates NGFR-mediated apoptosis. May act as a  regulator of the function of DLX family members. May regulate  TP53/p53 transcriptional activity and inhibit cell proliferation.  Enhances TP53 phosphorylation and accumulation. May enhance  ubiquitin ligase activity of RING-type zinc finger-containing E3  ubiquitin-protein ligases. Proposed to act through recruitment  and/or stabilization of the Ubl-conjugating enzyme (E2) at the  E3:substrate complex. (from UniProt Q9Y5V3)
BEX1 (ENST00000372728.4) at chrX:103062651-103064171 - Homo sapiens brain expressed X-linked 1 (BEX1), mRNA. (from RefSeq NM_018476)
TMEM35A (ENST00000372930.5) at chrX:101078879-101096367 - Homo sapiens transmembrane protein 35A (TMEM35A), mRNA. (from RefSeq NM_021637)
LINGO1 (ENST00000561030.5) at chr15:77613670-77696148 - Homo sapiens leucine rich repeat and Ig domain containing 1 (LINGO1), transcript variant 12, mRNA. (from RefSeq NM_001301200)
LINGO1 (ENST00000355300.6) at chr15:77613027-77632490 - Homo sapiens leucine rich repeat and Ig domain containing 1 (LINGO1), transcript variant 1, mRNA. (from RefSeq NM_032808)
FRS3 (ENST00000259748.6) at chr6:41770176-41778181 - Adapter protein that links FGF and NGF receptors to  downstream signaling pathways. Involved in the activation of MAP  kinases. Down-regulates ERK2 signaling by interfering with the  phosphorylation and nuclear translocation of ERK2. (from UniProt O43559)
CD80 (ENST00000478182.5) at chr3:119527464-119559556 - Involved in the costimulatory signal essential for T-  lymphocyte activation. T-cell proliferation and cytokine  production is induced by the binding of CD28 or CTLA-4 to this  receptor. (from UniProt P33681)
CD80 (ENST00000383669.3) at chr3:119527771-119557728 - Involved in the costimulatory signal essential for T-  lymphocyte activation. T-cell proliferation and cytokine  production is induced by the binding of CD28 or CTLA-4 to this  receptor. (from UniProt P33681)
MAGED1 (ENST00000375772.7) at chrX:51803007-51902354 - Homo sapiens MAGE family member D1 (MAGED1), transcript variant 3, mRNA. (from RefSeq NM_001005332)
MAGED1 (ENST00000375695.2) at chrX:51893639-51902354 - Homo sapiens MAGE family member D1 (MAGED1), transcript variant 1, mRNA. (from RefSeq NM_001005333)
MAGED1 (ENST00000326587.11) at chrX:51893602-51902357 - Homo sapiens MAGE family member D1 (MAGED1), transcript variant 2, mRNA. (from RefSeq NM_006986)
FRS3 (ENST00000373018.7) at chr6:41770176-41779900 - Homo sapiens fibroblast growth factor receptor substrate 3 (FRS3), mRNA. (from RefSeq NM_006653)
NGF (ENST00000369512.2) at chr1:115285918-115338236 - Homo sapiens nerve growth factor (NGF), mRNA. (from RefSeq NM_002506)
PTPN13 (ENST00000436978.5) at chr4:86594315-86815171 - Homo sapiens protein tyrosine phosphatase non-receptor type 13 (PTPN13), transcript variant 4, mRNA. (from RefSeq NM_080685)
PTPN13 (ENST00000427191.6) at chr4:86594315-86815157 - Homo sapiens protein tyrosine phosphatase non-receptor type 13 (PTPN13), transcript variant 2, mRNA. (from RefSeq NM_006264)
PTPN13 (ENST00000316707.10) at chr4:86594732-86815149 - Homo sapiens protein tyrosine phosphatase non-receptor type 13 (PTPN13), transcript variant 3, mRNA. (from RefSeq NM_080684)
PTPN13 (ENST00000411767.7) at chr4:86594315-86815161 - Homo sapiens protein tyrosine phosphatase non-receptor type 13 (PTPN13), transcript variant 1, mRNA. (from RefSeq NM_080683)
CD80 (ENST00000264246.8) at chr3:119524293-119559614 - Homo sapiens CD80 molecule (CD80), mRNA. (from RefSeq NM_005191)
NSMCE3 (ENST00000631973.1) at chr15_KI270905v1_alt:1543700-1545380 - Homo sapiens NSE3 homolog, SMC5-SMC6 complex component (NSMCE3), mRNA. (from RefSeq NM_138704)
RANBP9 (ENST00000011619.6) at chr6:13621498-13711835 - Homo sapiens RAN binding protein 9 (RANBP9), mRNA. (from RefSeq NM_005493)
NSMCE3 (ENST00000332303.6) at chr15:29264989-29269822 - Homo sapiens NSE3 homolog, SMC5-SMC6 complex component (NSMCE3), mRNA. (from RefSeq NM_138704)
KIDINS220 (ENST00000473731.5) at chr2:8728929-8837630 - Homo sapiens kinase D interacting substrate 220 (KIDINS220), transcript variant 8, mRNA. (from RefSeq NM_001348738)
KIDINS220 (ENST00000319688.5) at chr2:8757194-8837600 - Homo sapiens kinase D interacting substrate 220 (KIDINS220), transcript variant 14, mRNA. (from RefSeq NM_001348745)
KIDINS220 (ENST00000256707.7) at chr2:8728857-8837625 - Homo sapiens kinase D interacting substrate 220 (KIDINS220), transcript variant 1, mRNA. (from RefSeq NM_020738)
SQSTM1 (ENST00000360718.5) at chr5:179822485-179837255 - Homo sapiens sequestosome 1 (SQSTM1), transcript variant 3, mRNA. (from RefSeq NM_001142299)
SQSTM1 (ENST00000389805.9) at chr5:179820905-179838078 - Homo sapiens sequestosome 1 (SQSTM1), transcript variant 1, mRNA. (from RefSeq NM_003900)
SORT1 (ENST00000538502.5) at chr1:109309568-109393357 - Homo sapiens sortilin 1 (SORT1), transcript variant 2, mRNA. (from RefSeq NM_001205228)
SORT1 (ENST00000256637.8) at chr1:109309575-109397918 - Homo sapiens sortilin 1 (SORT1), transcript variant 1, mRNA. (from RefSeq NM_002959)
TRAF4 (ENST00000262395.10) at chr17:28744011-28750956 - Homo sapiens TNF receptor associated factor 4 (TRAF4), mRNA. (from RefSeq NM_004295)
NTRK2 (ENST00000376214.5) at chr9:84668551-85023590 - Homo sapiens neurotrophic receptor tyrosine kinase 2 (NTRK2), transcript variant a, mRNA. (from RefSeq NM_006180)
NTRK2 (ENST00000376208.5) at chr9:84669778-84877898 - Homo sapiens neurotrophic receptor tyrosine kinase 2 (NTRK2), transcript variant n, mRNA. (from RefSeq NM_001369538)
NTRK2 (ENST00000304053.10) at chr9:84669778-84877898 - Homo sapiens neurotrophic receptor tyrosine kinase 2 (NTRK2), transcript variant m, mRNA. (from RefSeq NM_001369537)
TRAF6 (ENST00000348124.5) at chr11:36489173-36510256 - Homo sapiens TNF receptor associated factor 6 (TRAF6), transcript variant 1, mRNA. (from RefSeq NM_145803)
TRAF6 (ENST00000526995.6) at chr11:36483769-36510272 - Homo sapiens TNF receptor associated factor 6 (TRAF6), transcript variant 2, mRNA. (from RefSeq NM_004620)
NTRK2 (ENST00000277120.7) at chr9:84669778-85027070 - Homo sapiens neurotrophic receptor tyrosine kinase 2 (NTRK2), transcript variant h, mRNA. (from RefSeq NM_001369536)
NTRK1 (ENST00000524377.5) at chr1:156860894-156881642 - Homo sapiens neurotrophic receptor tyrosine kinase 1 (NTRK1), transcript variant 2, mRNA. (from RefSeq NM_002529)
NTRK1 (ENST00000392302.6) at chr1:156815656-156881794 - Homo sapiens neurotrophic receptor tyrosine kinase 1 (NTRK1), transcript variant 3, mRNA. (from RefSeq NM_001007792)
TRAF2 (ENST00000247668.7) at chr9:136886516-136926607 - Homo sapiens TNF receptor associated factor 2 (TRAF2), mRNA. (from RefSeq NM_021138)
APP (ENST00000358918.7) at chr21:25881610-26170667 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 8, mRNA. (from RefSeq NM_001204301)
APP (ENST00000440126.7) at chr21:25881331-26140460 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 4, mRNA. (from RefSeq NM_001136016)
APP (ENST00000357903.7) at chr21:25880550-26170787 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 2, mRNA. (from RefSeq NM_201413)
APP (ENST00000354192.7) at chr21:25880550-26170747 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 5, mRNA. (from RefSeq NM_001136129)
APP (ENST00000348990.9) at chr21:25880550-26170767 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 3, mRNA. (from RefSeq NM_201414)
APP (ENST00000346798.8) at chr21:25880550-26170770 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 1, mRNA. (from RefSeq NM_000484)
BEX5 (ENST00000333643.4) at chrX:102153712-102155977 - Homo sapiens brain expressed X-linked 5 (BEX5), transcript variant 1, mRNA. (from RefSeq NM_001012978)
BEX5 (ENST00000543160.5) at chrX:102153708-102155790 - Homo sapiens brain expressed X-linked 5 (BEX5), transcript variant 2, mRNA. (from RefSeq NM_001159560)
BEX3 (ENST00000372645.3) at chrX:103376395-103378077 - Homo sapiens brain expressed X-linked 3 (BEX3), transcript variant 2, mRNA. (from RefSeq NM_206915)
BEX3 (ENST00000372635.1) at chrX:103376407-103378060 - Homo sapiens brain expressed X-linked 3 (BEX3), transcript variant 4, mRNA. (from RefSeq NM_001282674)
BEX3 (ENST00000361298.8) at chrX:103376340-103378077 - Homo sapiens brain expressed X-linked 3 (BEX3), transcript variant 1, mRNA. (from RefSeq NM_206917)
BEX3 (ENST00000372634.1) at chrX:103376916-103378071 - May be a signaling adapter molecule involved in p75NTR-  mediated apoptosis induced by NGF. Plays a role in zinc-triggered  neuronal death (By similarity). May play an important role in the  pathogenesis of neurogenetic diseases. (from UniProt Q00994)
TSC1 (ENST00000545250.5) at chr9:132891350-132928955 - In complex with TSC2, inhibits the nutrient-mediated or  growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by  negatively regulating mTORC1 signaling. Seems not to be required  for TSC2 GAP activity towards RHEB. Implicated as a tumor  suppressor. Involved in microtubule-mediated protein transport,  but this seems to be due to unregulated mTOR signaling. (from UniProt Q92574)
DIABLO (ENST00000650715.1) at chr12:122207668-122227456 - Homo sapiens diablo IAP-binding mitochondrial protein (DIABLO), transcript variant 1, mRNA. (from RefSeq NM_019887)
DIABLO (ENST00000464942.7) at chr12:122207668-122226052 - Homo sapiens diablo IAP-binding mitochondrial protein (DIABLO), transcript variant 2, mRNA. (from RefSeq NM_138930)
DIABLO (ENST00000353548.11) at chr12:122207669-122226052 - Homo sapiens diablo IAP-binding mitochondrial protein (DIABLO), transcript variant 3, mRNA. (from RefSeq NM_001278342)
AC048338.2 (ENST00000443649.8) at chr12:122207663-122227534 - Promotes apoptosis by activating caspases in the  cytochrome c/Apaf-1/caspase-9 pathway. Acts by opposing the  inhibitory activity of inhibitor of apoptosis proteins (IAP).  Inhibits the activity of BIRC6/bruce by inhibiting its binding to  caspases. Isoform 3 attenuates the stability and apoptosis-  inhibiting activity of XIAP/BIRC4 by promoting XIAP/BIRC4  ubiquitination and degradation through the ubiquitin-proteasome  pathway. Isoform 3 also disrupts XIAP/BIRC4 interacting with  processed caspase-9 and promotes caspase-3 activation. Isoform 1  is defective in the capacity to down-regulate the XIAP/BIRC4  abundance. (from UniProt Q9NR28)
TSC1 (ENST00000643072.1) at chr9:132896198-132944616 - Homo sapiens TSC complex subunit 1 (TSC1), transcript variant 5, mRNA. (from RefSeq NM_001362177)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_002507.4 at chr17:49495293-49515008

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

NGFR at chr17:49495293-49515008

RefSeq Genes

NGFR at chr17:49495293-49515005 - (NM_002507) tumor necrosis factor receptor superfamily member 16 precursor

Non-Human RefSeq Genes

NGFR at chr17:49495359-49515004 - (NM_001102478) tumor necrosis factor receptor superfamily member 16 precursor
NGFR at chr17:49502090-49513009 - (NM_001146133) tumor necrosis factor receptor superfamily member 16 precursor
Ngfr at chr17:49495422-49514972 - (NM_033217) tumor necrosis factor receptor superfamily member 16 precursor
Ngfr at chr17:49495422-49514971 - (NM_012610) tumor necrosis factor receptor superfamily member 16 precursor
ngfrb at chr17:49502090-49512781 - (NM_001198660) nerve growth factor receptor b precursor

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

NGFR at chr17:49495293-49515008
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

NGFR at chr17:49495293-49515008
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NGFR at chr17:49495293-49515008
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NGFR at chr17:49495293-49515008
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NGFR at chr17:49495293-49515017
NGFR at chr17:49497391-49513372

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NGFR at chr17:49495293-49515017
NGFR at chr17:49496624-49506385
NGFR at chr17:49497391-49513372

International Knockout Mouse Consortium Genes Mapped to Human Genome

Ngfrap1_30996 at chrX:103376340-103378073
Ngfrap1_VG11791 at chrX:103376340-103378073
Ngfr_24370 at chr17:49495293-49515020
Ngfr_24371 at chr17:49495293-49515020
Ngfr_75478 at chr17:49495293-49515020
Ngfr_VG17805 at chr17:49495293-49515020

Human Aligned mRNA Search Results

BC003190 - Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:802 IMAGE:3357965), complete cds.
BC050309 - Homo sapiens nerve growth factor receptor (TNFR superfamily, member 16), mRNA (cDNA clone MGC:48326 IMAGE:5263715), complete cds.
M14764 - Human nerve growth factor receptor mRNA, complete cds.
AK315371 - Homo sapiens cDNA, FLJ96417, Homo sapiens nerve growth factor receptor (TNFRSF16) associatedprotein 1 (NGFRAP1), mRNA.
AK313654 - Homo sapiens cDNA, FLJ94232, Homo sapiens nerve growth factor receptor (TNFR superfamily, member16) (NGFR), mRNA.

Non-Human Aligned mRNA Search Results

BC091671 - Danio rerio nerve growth factor receptor (TNFR superfamily, member 16) like, mRNA (cDNA clone IMAGE:7141135), partial cds.
BC058503 - Rattus norvegicus nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:72988 IMAGE:6887969), complete cds.
BC103258 - Bos taurus nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:128542 IMAGE:7985099), complete cds.
BC142255 - Bos taurus nerve growth factor receptor (TNFR superfamily, member 16), mRNA (cDNA clone MGC:148470 IMAGE:8194358), complete cds.
KP728107 - Gobiocypris rarus nerve growth factor receptor (ngfr) mRNA, partial cds.
BC038365 - Mus musculus nerve growth factor receptor (TNFR superfamily, member 16), mRNA (cDNA clone MGC:35588 IMAGE:5367638), complete cds.
BC027815 - Mus musculus nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:36095 IMAGE:5250429), complete cds.
BC166418 - Rattus norvegicus nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:187350 IMAGE:7314222), complete cds.
JU320102 - TSA: Macaca mulatta Mamu_508239 mRNA sequence.
JU320103 - TSA: Macaca mulatta Mamu_508240 mRNA sequence.
JU475171 - TSA: Macaca mulatta Mamu_391661 mRNA sequence.
AY738616 - Macaca mulatta nerve growth factor receptor (NGFR) mRNA, partial cds.
EU282004 - Gallus gallus low affinity neurotrophin p75 receptor precursor (NGFR) mRNA, complete cds.
X05137 - Rat mRNA for fast nerve growth factor receptor (NGFR).