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UCSC Genes

NFX1 (uc003zsq.3) at chr9:33290418-33371155 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 1, mRNA.
NFX1 (uc011lnw.2) at chr9:33290418-33347735 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 3, mRNA.
NFX1 (uc010mjr.2) at chr9:33290418-33365168 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 2, mRNA.
NFX1 (uc003zsr.3) at chr9:33290418-33371155 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 1, mRNA.
NFX1 (uc003zsp.2) at chr9:33290418-33365168 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 2, mRNA.
NFX1 (uc003zso.3) at chr9:33290418-33348721 - Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 3, mRNA.
ZNFX1 (uc002xui.3) at chr20:47862439-47894756 - Homo sapiens zinc finger, NFX1-type containing 1 (ZNFX1), mRNA.
NFXL1 (uc003gxp.3) at chr4:47849258-47916633 - Homo sapiens nuclear transcription factor, X-box binding-like 1 (NFXL1), mRNA.
NFXL1 (uc010igi.3) at chr4:47849258-47916680 - Homo sapiens nuclear transcription factor, X-box binding-like 1 (NFXL1), mRNA.
NFXL1 (uc010igh.3) at chr4:47849258-47916556 - Homo sapiens nuclear transcription factor, X-box binding-like 1 (NFXL1), mRNA.
PABPC4 (uc010oiv.1) at chr1:40026485-40042521 - Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form) (PABPC4), transcript variant 2, mRNA.
PABPC1 (uc003yjs.1) at chr8:101715144-101734315 - Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA.
PABPC1 (uc011lhd.1) at chr8:101715144-101734315 - Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA.
PABPC1 (uc003yjt.1) at chr8:101715144-101734315 - Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA.
DDX3X (uc004dfe.3) at chrX:41192651-41209524 - Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), transcript variant 1, mRNA.
DDX3X (uc004dff.3) at chrX:41192651-41209524 - Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), transcript variant 2, mRNA.
DDX3X (uc011mkr.2) at chrX:41192651-41209524 - Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_147134.3 at chr9:33290415-33348721
NM_002504.5 at chr9:33290415-33371161
NM_001318758.1 at chr9:33290415-33371161

RefSeq Genes

NFX1 at chr9:33290514-33371155 - (NM_002504) transcriptional repressor NF-X1 isoform 1
NFX1 at chr9:33290514-33348729 - (NM_147134) transcriptional repressor NF-X1 isoform 3
NFX1 at chr9:33290514-33371155 - (NM_001318758) transcriptional repressor NF-X1 isoform 4
ZNFX1 at chr20:47862439-47894594 - (NM_021035) NFX1-type zinc finger-containing protein 1

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

zinc finger NFX1-type containing 1 at chr20:47862437-47894756 - (NM_021035.2)

Non-Human RefSeq Genes

Nfx1 at chr9:33290467-33370053 - (NM_001024784) transcriptional repressor NF-X1
Nfx1 at chr9:33290485-33370649 - (NM_023739) transcriptional repressor NF-X1 isoform 1
NFX1 at chr9:33290510-33370137 - (NM_001102029) transcriptional repressor NF-X1
Nfx1 at chr9:33290466-33347117 - (NM_001290448) transcriptional repressor NF-X1 isoform 2
Nfx1 at chr9:33290466-33347116 - (NM_001290449) transcriptional repressor NF-X1 isoform 3
Znfx1 at chr20:47862441-47894961 - (NM_001033196) NFX1-type zinc finger-containing protein 1 isoform a
Znfx1 at chr20:47862441-47872506 - (NM_001291162) NFX1-type zinc finger-containing protein 1 isoform b precursor
ZNFX1 at chr20:47862438-47888288 - (NM_001205716) NFX1-type zinc finger-containing protein 1
Znfx1 at chr20:47863824-47888285 - (NM_001047860) NFX1-type zinc finger-containing protein 1

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

NFX1 at chr9:33290514-33371155
NFX1 at chr9:33290543-33348721

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290514-33371155
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290543-33348721

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290543-33348721

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from GENCODE Version 19

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33365231-33367576

Comprehensive Gene Annotation Set from GENCODE Version 19

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33365231-33367576

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33365231-33367576

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365271
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290510-33371154
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33365231-33367576

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

NFX1 at chr9:33290509-33371155
NFX1 at chr9:33290510-33365271
NFX1 at chr9:33290510-33365281
NFX1 at chr9:33290510-33371154
NFX1 at chr9:33290543-33348721
NFX1 at chr9:33319019-33332655
NFX1 at chr9:33342810-33351880
NFX1 at chr9:33365231-33367576

International Knockout Mouse Consortium Genes Mapped to Human Genome

Nfx1_26971 at chr9:33290418-33371155
Nfx1_26972 at chr9:33290418-33371155
Nfx1_26973 at chr9:33290418-33371155
Nfx1_79310 at chr9:33290418-33371155
Nfx1_89595 at chr9:33290418-33371155

Human Aligned mRNA Search Results

U15306 - Human cysteine-rich sequence-specific DNA-binding protein NFX1 mRNA, complete cds.
BC006447 - Homo sapiens nuclear transcription factor, X-box binding 1, mRNA (cDNA clone IMAGE:3636513), partial cds.
BC012151 - Homo sapiens nuclear transcription factor, X-box binding 1, mRNA (cDNA clone MGC:20369 IMAGE:4558442), complete cds.
BC110888 - Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:5218186), complete cds.
BC062347 - Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:3689423), partial cds.
BC041630 - Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:4300355).
BC014041 - Homo sapiens zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:4546448), partial cds.
AK291643 - Homo sapiens cDNA FLJ78663 complete cds, highly similar to Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 2, mRNA.

Non-Human Aligned mRNA Search Results

JL623546 - TSA: Equus caballus contig08013.EqcaPBMC mRNA sequence.
JP021777 - TSA: Mustela putorius furo MPF81019129contig1/3 mRNA sequence.
JP021778 - TSA: Mustela putorius furo MPF81019130contig2/3 mRNA sequence.
JP021779 - TSA: Mustela putorius furo MPF81019131contig3/3 mRNA sequence.
JU335588 - TSA: Macaca mulatta Mamu_501986 mRNA sequence.
JU476501 - TSA: Macaca mulatta Mamu_366158 mRNA sequence.
JU476502 - TSA: Macaca mulatta Mamu_366159 mRNA sequence.
JU476503 - TSA: Macaca mulatta Mamu_366160 mRNA sequence.
JV047735 - TSA: Macaca mulatta Mamu_429859 mRNA sequence.
JW861843 - TSA: Callorhinchus milii in.comp13190_c0_seq3 mRNA sequence.
JW861972 - TSA: Callorhinchus milii sp.comp2708_c0_seq1 mRNA sequence.
BC053709 - Mus musculus nuclear transcription factor, X-box binding 1, mRNA (cDNA clone MGC:60455 IMAGE:30052746), complete cds.
BC147890 - Bos taurus nuclear transcription factor, X-box binding 1, mRNA (cDNA clone MGC:152506 IMAGE:8423152), complete cds.
BC098037 - Rattus norvegicus nuclear transcription factor, X-box binding 1, mRNA (cDNA clone MGC:116193 IMAGE:7456610), complete cds.
JU334670 - TSA: Macaca mulatta Mamu_527677 mRNA sequence.
JU334671 - TSA: Macaca mulatta Mamu_527676 mRNA sequence.
JU475720 - TSA: Macaca mulatta Mamu_368250 mRNA sequence.
JV047164 - TSA: Macaca mulatta Mamu_417172 mRNA sequence.
JV636175 - TSA: Macaca mulatta Mamu_484609 mRNA sequence.
BT071932 - Salmo salar clone ssal-rgf-504-140 NFX1-type zinc finger-containing protein 1 putative mRNA, pseudogene cds.
BC025488 - Mus musculus zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:5252426), partial cds.
AB172013 - Macaca fascicularis brain cDNA clone: QflA-16322, similar to human nuclear transcription factor, X-box binding 1 (NFX1),transcript variant 2, mRNA, RefSeq: NM_147133.1.
BC059933 - Mus musculus zinc finger, NFX1-type containing 1, mRNA (cDNA clone IMAGE:6826490).

Ensembl Genes

NFX1 at chr9:33342810-33351880 - (ENST00000466971)
NFX1 at chr9:33290543-33348721 - (ENST00000318524)
NFX1 at chr9:33290509-33371155 - (ENST00000379540)
ZNFX1 at chr20:47872345-47894578 - (ENST00000371744)
ZNFX1 at chr20:47862434-47894602 - (ENST00000371752)
ZNFX1 at chr20:47854483-47894963 - (ENST00000371754)
ZNFX1 at chr20:47855480-47861289 - (ENST00000469991)
ZNFX1 at chr20:47862437-47894756 - (ENST00000396105)
ZNFX1 at chr20:47872470-47887760 - (ENST00000455070)
NFX1 at chr9:33290510-33365281 - (ENST00000379521)
NFX1 at chr9:33319019-33332655 - (ENST00000466359)
NFX1 at chr9:33365231-33367576 - (ENST00000463421)

Vega Protein-Coding Annotations

OTTHUMT00000052069 at chr9:33290509-33371155
OTTHUMT00000052070 at chr9:33290510-33365281
OTTHUMT00000052072 at chr9:33290543-33348721
OTTHUMT00000052073 at chr9:33319019-33332655
OTTHUMT00000052074 at chr9:33342810-33351880
OTTHUMT00000052071 at chr9:33365231-33367576