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Gencode Genes

NABP1 (ENST00000425611.7) at chr2:191678136-191696664 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 1, mRNA. (from RefSeq NM_001031716)
NABP1 (ENST00000491331.5) at chr2:191678068-191682487 - nucleic acid binding protein 1 (from HGNC NABP1)
NABP1 (ENST00000462824.1) at chr2:191683505-191685076 - nucleic acid binding protein 1 (from HGNC NABP1)
NABP1 (ENST00000462712.5) at chr2:191678136-191683135 - nucleic acid binding protein 1 (from HGNC NABP1)
NABP1 (ENST00000451500.5) at chr2:191678147-191686157 - Component of the SOSS complex, a multiprotein complex  that functions downstream of the MRN complex to promote DNA repair  and G2/M checkpoint. In the SOSS complex, acts as a sensor of  single-stranded DNA that binds to single-stranded DNA, in  particular to polypyrimidines. The SOSS complex associates with  DNA lesions and influences diverse endpoints in the cellular DNA  damage response including cell-cycle checkpoint activation,  recombinational repair and maintenance of genomic stability.  Required for efficient homologous recombination-dependent repair  of double-strand breaks (DSBs) and ATM-dependent signaling  pathways. (from UniProt Q96AH0)
NABP1 (ENST00000435931.1) at chr2:191678990-191686177 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H7C0W4)
NABP1 (ENST00000410026.6) at chr2:191678136-191696659 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 2, mRNA. (from RefSeq NM_001254736)
NABP1 (ENST00000409510.5) at chr2:191678204-191685894 - Component of the SOSS complex, a multiprotein complex  that functions downstream of the MRN complex to promote DNA repair  and G2/M checkpoint. In the SOSS complex, acts as a sensor of  single-stranded DNA that binds to single-stranded DNA, in  particular to polypyrimidines. The SOSS complex associates with  DNA lesions and influences diverse endpoints in the cellular DNA  damage response including cell-cycle checkpoint activation,  recombinational repair and maintenance of genomic stability.  Required for efficient homologous recombination-dependent repair  of double-strand breaks (DSBs) and ATM-dependent signaling  pathways. (from UniProt Q96AH0)
NABP1 (ENST00000307849.7) at chr2:191678136-191687572 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 4, non-coding RNA. (from RefSeq NR_045623)
NABP1 (ENST00000307834.9) at chr2:191678127-191686939 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 3, non-coding RNA. (from RefSeq NR_045622)
INIP (ENST00000374242.9) at chr9:112683926-112718117 - Homo sapiens INTS3 and NABP interacting protein (INIP), transcript variant 1, mRNA. (from RefSeq NM_021218)
NABP2 (ENST00000341463.5) at chr12:56224401-56229844 - Component of the SOSS complex, a multiprotein complex  that functions downstream of the MRN complex to promote DNA repair  and G2/M checkpoint. In the SOSS complex, acts as a sensor of  single-stranded DNA that binds to single-stranded DNA, in  particular to polypyrimidines. The SOSS complex associates with  DNA lesions and influences diverse endpoints in the cellular DNA  damage response including cell-cycle checkpoint activation,  recombinational repair and maintenance of genomic stability.  Required for efficient homologous recombination-dependent repair  of double-strand breaks (DSBs) and ATM-dependent signaling  pathways. (from UniProt Q9BQ15)
NABP2 (ENST00000380198.6) at chr12:56224359-56229854 - Component of the SOSS complex, a multiprotein complex  that functions downstream of the MRN complex to promote DNA repair  and G2/M checkpoint. In the SOSS complex, acts as a sensor of  single-stranded DNA that binds to single-stranded DNA, in  particular to polypyrimidines. The SOSS complex associates with  DNA lesions and influences diverse endpoints in the cellular DNA  damage response including cell-cycle checkpoint activation,  recombinational repair and maintenance of genomic stability.  Required for efficient homologous recombination-dependent repair  of double-strand breaks (DSBs) and ATM-dependent signaling  pathways. (from UniProt Q9BQ15)
NABP2 (ENST00000267023.9) at chr12:56224342-56229854 - Homo sapiens nucleic acid binding protein 2 (NABP2), mRNA. (from RefSeq NM_024068)
INTS3 (ENST00000576422.4) at chr1_GL383518v1_alt:67555-90429 - Component of the Integrator complex. The Integrator  complex is involved in the small nuclear RNAs (snRNA) U1 and U2  transcription and in their 3'-box-dependent processing. The  Integrator complex is associated with the C-terminal domain (CTD)  of RNA polymerase II largest subunit (POLR2A) and is recruited to  the U1 and U2 snRNAs genes. (from UniProt Q68E01)
INTS3 (ENST00000571768.5) at chr1_GL383518v1_alt:44792-90236 - Component of the Integrator complex. The Integrator  complex is involved in the small nuclear RNAs (snRNA) U1 and U2  transcription and in their 3'-box-dependent processing. The  Integrator complex is associated with the C-terminal domain (CTD)  of RNA polymerase II largest subunit (POLR2A) and is recruited to  the U1 and U2 snRNAs genes. (from UniProt Q68E01)
INTS3 (ENST00000512605.4) at chr1:153750854-153773728 - Component of the Integrator complex. The Integrator  complex is involved in the small nuclear RNAs (snRNA) U1 and U2  transcription and in their 3'-box-dependent processing. The  Integrator complex is associated with the C-terminal domain (CTD)  of RNA polymerase II largest subunit (POLR2A) and is recruited to  the U1 and U2 snRNAs genes. (from UniProt Q68E01)
INTS3 (ENST00000435409.6) at chr1:153728091-153773535 - Component of the Integrator complex. The Integrator  complex is involved in the small nuclear RNAs (snRNA) U1 and U2  transcription and in their 3'-box-dependent processing. The  Integrator complex is associated with the C-terminal domain (CTD)  of RNA polymerase II largest subunit (POLR2A) and is recruited to  the U1 and U2 snRNAs genes. (from UniProt Q68E01)
INTS3 (ENST00000576030.5) at chr1_GL383518v1_alt:44768-91509 - Homo sapiens integrator complex subunit 3 (INTS3), transcript variant 1, mRNA. (from RefSeq NM_023015)
INTS3 (ENST00000318967.7) at chr1:153728050-153774808 - Homo sapiens integrator complex subunit 3 (INTS3), transcript variant 1, mRNA. (from RefSeq NM_023015)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001254736.1 at chr2:191678072-191688522
NR_045622.1 at chr2:191678072-191688522
NM_001031716.2 at chr2:191678135-191688522
NR_045623.1 at chr2:191678136-191688522

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017004722.2 at chr2:191678136-191684138

RefSeq Genes

NABP1 at chr2:191678136-191690151 - (NR_045623) 
NABP1 at chr2:191678136-191690667 - (NM_001031716) SOSS complex subunit B2 isoform 1
NABP1 at chr2:191678072-191690151 - (NM_001254736) SOSS complex subunit B2 isoform 2
NABP1 at chr2:191678072-191690151 - (NR_045622) 

Non-Human RefSeq Genes

NABP1 at chr2:191678137-191686200 - (NM_001244491) SOSS complex subunit B2
NABP1 at chr2:191678451-191686004 - (NM_001261728) SOSS complex subunit B2
Nabp1 at chr2:191678137-191686761 - (NM_028696) SOSS complex subunit B2 isoform a
Nabp1 at chr2:191678983-191686761 - (NM_001310549) SOSS complex subunit B2 isoform b
Nabp1 at chr2:191678137-191686761 - (NM_001310548) SOSS complex subunit B2 isoform b
Nabp1 at chr2:191678608-191687122 - (NM_001014216) SOSS complex subunit B2
NABP1 at chr2:191678594-191686879 - (NM_001098124) SOSS complex subunit B2
nabp1a at chr2:191678639-191685768 - (NM_001008643) SOSS complex subunit B2
nabp1a at chr12:56224878-56226230 - (NM_001008643) SOSS complex subunit B2
nabp1b at chr12:56224878-56226230 - (NM_001030252) SOSS complex subunit B1

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

NABP1 at chr2:191678068-191682487
NABP1 at chr2:191678127-191686939
NABP1 at chr2:191678136-191683135
NABP1 at chr2:191678136-191687572
NABP1 at chr2:191678136-191696659
NABP1 at chr2:191678147-191686157
NABP1 at chr2:191678204-191685894
NABP1 at chr2:191678532-191686948
NABP1 at chr2:191678990-191686177
NABP1 at chr2:191683505-191685076

Human Unaligned mRNA Search Results

NR_045623 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 4, non-coding RNA.
NR_045622 - Homo sapiens nucleic acid binding protein 1 (NABP1), transcript variant 3, non-coding RNA.

AY880264 Alignments in Non-Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1000   85.8%          2     ++ 191678137 191686761  AY880264     3  2222  2839