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UCSC Genes

MTHFR (uc001atc.2) at chr1:11845787-11866160 - Homo sapiens methylenetetrahydrofolate reductase (NAD(P)H) (MTHFR), mRNA.
MTHFR (uc031plg.1) at chr1:11845787-11856547 - Homo sapiens methylenetetrahydrofolate reductase (NAD(P)H) (MTHFR), mRNA.
MTHFR (uc009vnd.1) at chr1:11862938-11865470 - Homo sapiens methylenetetrahydrofolate reductase (NAD(P)H) (MTHFR), mRNA.
MTHFR (uc001atd.1) at chr1:11862938-11865470 - Homo sapiens methylenetetrahydrofolate reductase (NAD(P)H) (MTHFR), mRNA.
MTHFR (uc001atb.1) at chr1:11845787-11863440 - Homo sapiens methylenetetrahydrofolate reductase (NAD(P)H) (MTHFR), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001330358.1 at chr1:11845787-11863734
NM_005957.4 at chr1:11845787-11866160

RefSeq Genes

MTHFR at chr1:11845781-11866021 - (NM_005957) methylenetetrahydrofolate reductase isoform 2
MTHFR at chr1:11845787-11863734 - (NM_001330358) methylenetetrahydrofolate reductase isoform 1

Non-Human RefSeq Genes

mthfr at chr1:11850791-11863104 - (NM_001102994) methylenetetrahydrofolate reductase
MTHFR at chr1:11850764-11863116 - (NM_001328491) methylenetetrahydrofolate reductase
MTHFR at chr1:11850536-11863117 - (NM_001011685) methylenetetrahydrofolate reductase
MTHFR at chr1:11850663-11866026 - (NM_001284649) methylenetetrahydrofolate reductase
Mthfr at chr1:11848350-11863188 - (NM_010840) methylenetetrahydrofolate reductase isoform b
Mthfr at chr1:11848350-11863593 - (NM_001161798) methylenetetrahydrofolate reductase isoform a
mthfr at chr1:11850779-11863119 - (NM_001281840) methylenetetrahydrofolate reductase
mthfr at chr1:11850779-11863119 - (NM_001128255) methylenetetrahydrofolate reductase
Mthfr at chr1:11848350-11863593 - (NR_027809) 
mthfr.L at chr1:11850767-11863104 - (NM_001086623) 5,10-methylenetetrahydrofolate reductase

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11850125-11863583
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850699-11856602

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11849823-11866512
MTHFR at chr1:11850098-11863734
MTHFR at chr1:11850125-11863583
MTHFR at chr1:11850125-11866059
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850623-11863583
MTHFR at chr1:11850699-11856602
MTHFR at chr1:11855158-11863505
MTHFR at chr1:11856354-11866120
MTHFR at chr1:11859849-11863583
MTHFR at chr1:11859914-11866063
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11861375-11865470
MTHFR at chr1:11861390-11866160
MTHFR at chr1:11863085-11865351

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850699-11856602

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11849823-11866512
MTHFR at chr1:11850098-11863734
MTHFR at chr1:11850125-11866059
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850623-11863583
MTHFR at chr1:11850699-11856602
MTHFR at chr1:11855158-11863505
MTHFR at chr1:11856354-11866120
MTHFR at chr1:11859849-11863583
MTHFR at chr1:11859914-11866063
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11861346-11863583
MTHFR at chr1:11861375-11865470
MTHFR at chr1:11861390-11866160
MTHFR at chr1:11863085-11865351

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850699-11856602

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

MTHFR at chr1:11845780-11865470
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11845789-11865470
MTHFR at chr1:11846660-11866977
MTHFR at chr1:11849823-11866512
MTHFR at chr1:11850098-11863734
MTHFR at chr1:11850125-11866059
MTHFR at chr1:11850406-11863440
MTHFR at chr1:11850623-11863583
MTHFR at chr1:11850699-11856602
MTHFR at chr1:11855158-11863505
MTHFR at chr1:11856354-11866120
MTHFR at chr1:11859849-11863583
MTHFR at chr1:11859914-11866063
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11861346-11863583
MTHFR at chr1:11861375-11865470
MTHFR at chr1:11861390-11866160
MTHFR at chr1:11863085-11865351

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845787-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11863085-11865351
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11866977

Basic Gene Annotation Set from GENCODE Version 19

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470

Comprehensive Gene Annotation Set from GENCODE Version 19

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11863085-11865351
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11866977

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11863085-11865351
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11866977

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11863085-11865351
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11866977

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

MTHFR at chr1:11845780-11863302
MTHFR at chr1:11845810-11863571
MTHFR at chr1:11846660-11866115
MTHFR at chr1:11848351-11865470
MTHFR at chr1:11861262-11865993
MTHFR at chr1:11863085-11865351
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11865470
MTHFR at chr1:11863085-11866977

International Knockout Mouse Consortium Genes Mapped to Human Genome

Mthfr_23828 at chr1:11845787-11866160
Mthfr_72400 at chr1:11845787-11866160

Human Aligned mRNA Search Results

AJ237672 - Homo sapiens mRNA for methylenetetrahydrofolate reductase.
BC053509 - Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH), mRNA (cDNA clone MGC:59799 IMAGE:6374885), complete cds.
JQ429447 - Homo sapiens 5,10-methylenetetrahydrofolate reductase isoform 2 (MTHFR) mRNA, complete cds, alternatively spliced.
AK312907 - Homo sapiens cDNA, FLJ93354, highly similar to Homo sapiens 5,10-methylenetetrahydrofolate reductase (NADPH)(MTHFR), mRNA.

Non-Human Aligned mRNA Search Results

BC046708 - Xenopus laevis 5,10-methylenetetrahydrofolate reductase (NADPH), mRNA (cDNA clone MGC:53253 IMAGE:5543666), complete cds.
BC051017 - Mus musculus 5,10-methylenetetrahydrofolate reductase, mRNA (cDNA clone MGC:54647 IMAGE:6308248), complete cds.
AF404271 - Mus musculus methylenetetrahydrofolate reductase short isoform (Mthfr) mRNA, partial cds; alternatively spliced.
AF404272 - Mus musculus methylenetetrahydrofolate reductase short isoform (Mthfr) mRNA, partial cds; alternatively spliced.
AF404274 - Mus musculus methylenetetrahydrofolate reductase short isoform (Mthfr) mRNA, partial cds; alternatively spliced.
BC052466 - Mus musculus 5,10-methylenetetrahydrofolate reductase, mRNA (cDNA clone MGC:63414 IMAGE:6834886), complete cds.
AF239166 - Sus scrofa methylenetetrahydrofolate reductase (MTHFR) mRNA, partial cds.
AY854631 - Bos taurus methylenetetrahydrofolate reductase (MTHFR) mRNA, complete cds.
HM187757 - Sus scrofa 5,10-methylenetetrahydrofolate reductase (MTHFR) mRNA, partial cds.
KM243021 - Capra hircus methylenetetrahydrofolate reductase NADPH variant X (MTHFR) mRNA, 3' UTR.
AB125182 - Macaca fascicularis MTHFR mRNA for 5,10-methylenetetrahydrofolate reductase, complete cds.
U09806 - Synthetic construct methylenetetrahydrofolate reductase (MTHFR) mRNA, complete cds.
JU334606 - TSA: Macaca mulatta Mamu_529382 mRNA sequence.
JU475674 - TSA: Macaca mulatta Mamu_387081 mRNA sequence.
JV047120 - TSA: Macaca mulatta Mamu_429065 mRNA sequence.
JN848836 - Danio rerio strain TAB5 methylenetetrahydrofolate reductase (MTHFR) mRNA, complete cds.
JU175165 - TSA: Crotalus adamanteus Cadam_MTHFReductase, mRNA sequence.
AB174536 - Macaca fascicularis brain cDNA clone: QtrA-17780, similar to human 5,10-methylenetetrahydrofolate reductase (NADPH)(MTHFR), mRNA, RefSeq: NM_005957.2.

Ensembl Genes

MTHFR at chr1:11863085-11865470 - (ENST00000423400)
MTHFR at chr1:11863085-11866977 - (ENST00000376486)
MTHFR at chr1:11848351-11865470 - (ENST00000376585)
MTHFR at chr1:11845810-11863571 - (ENST00000376583)
MTHFR at chr1:11845780-11863302 - (ENST00000376592)
MTHFR at chr1:11846660-11866115 - (ENST00000376590)
MTHFR at chr1:11861262-11865993 - (ENST00000418034)
MTHFR at chr1:11863085-11865470 - (ENST00000431243)
MTHFR at chr1:11863085-11865351 - (ENST00000413656)

Vega Protein-Coding Annotations

OTTHUMT00000006538 at chr1:11845780-11863302
OTTHUMT00000006539 at chr1:11846660-11866115
OTTHUMT00000006544 at chr1:11848351-11865470
OTTHUMT00000006541 at chr1:11861262-11865993
OTTHUMT00000006545 at chr1:11863085-11865351
OTTHUMT00000006543 at chr1:11863085-11865470
OTTHUMT00000006542 at chr1:11863085-11865470
OTTHUMT00000006540 at chr1:11863085-11866977

Pfam Domains in UCSC Genes

MTHFR at chr1:11855175-11863032