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UCSC Genes

LTN1 (uc002ymr.2) at chr21:30300466-30365277 - Homo sapiens listerin E3 ubiquitin protein ligase 1 (LTN1), mRNA.
LTN1 (uc010gll.1) at chr21:30338692-30359255 - Homo sapiens listerin E3 ubiquitin protein ligase 1 (LTN1), mRNA.
TMEM173 (uc003lep.3) at chr5:138855113-138862343 - Homo sapiens transmembrane protein 173 (TMEM173), nuclear gene encoding mitochondrial protein, mRNA.
TIRAP (uc001qdn.1) at chr11:126152982-126164828 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
TIRAP (uc001qdo.1) at chr11:126152982-126164828 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
TIRAP (uc001qdm.1) at chr11:126152982-126164534 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
IRF7 (uc009ycb.3) at chr11:612555-615259 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.
IRF7 (uc001lqh.3) at chr11:612555-615999 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.
IRF7 (uc010qwf.2) at chr11:612555-615647 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_015565.2 at chr21:30300466-30365277
NM_001320766.1 at chr21:30300467-30365280

RefSeq Genes

LTN1 at chr21:30300466-30365198 - (NM_015565) E3 ubiquitin-protein ligase listerin isoform 1
LTN1 at chr21:30300466-30365198 - (NM_001320766) E3 ubiquitin-protein ligase listerin isoform 2

Non-Human RefSeq Genes

LTN1 at chr21:30302567-30365126 - (NM_001192509) E3 ubiquitin-protein ligase listerin
Ltn1 at chr21:30302484-30365126 - (NM_001024235) E3 ubiquitin-protein ligase listerin
LTN1 at chr21:30302770-30365126 - (NM_001305161) E3 ubiquitin-protein ligase listerin
Ltn1 at chr21:30300483-30365152 - (NM_001081068) E3 ubiquitin-protein ligase listerin
ltn1 at chr21:30302767-30365126 - (NM_001079277) E3 ubiquitin-protein ligase listerin

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

LTN1 at chr21:30300466-30365198
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

LTN1 at chr21:30300466-30365198
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from GENCODE Version 19

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from GENCODE Version 19

LTN1 at chr21:30300466-30365206
LTN1 at chr21:30300466-30365270
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

LTN1 at chr21:30300466-30365270
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30300466-30365277
LTN1 at chr21:30330728-30332184
LTN1 at chr21:30330772-30333143
LTN1 at chr21:30333639-30365270
LTN1 at chr21:30339217-30359082

International Knockout Mouse Consortium Genes Mapped to Human Genome

Ltn1_45593 at chr21:30300466-30365277
Ltn1_VG19473 at chr21:30300466-30365277

AB621822 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
  687  100.0%         21     -  30354638  30365184  AB621822     1   687   687

Ensembl Genes

LTN1 at chr21:30333639-30365270 - (ENST00000389195)
LTN1 at chr21:30330728-30332184 - (ENST00000486427)
LTN1 at chr21:30300466-30365270 - (ENST00000389194)
LTN1 at chr21:30300466-30365206 - (ENST00000361371)
LTN1 at chr21:30330772-30333143 - (ENST00000475344)
LTN1 at chr21:30339217-30359082 - (ENST00000483326)