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Gencode Genes

KDM5A (ENST00000399788.7) at chr12:280057-389320 - Homo sapiens lysine demethylase 5A (KDM5A), mRNA. (from RefSeq NM_001042603)
KDM5A (ENST00000544777.1) at chr12:333068-334328 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000544760.1) at chr12:309891-389282 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E7EV89)
KDM5A (ENST00000543507.1) at chr12:384031-389273 - Contains 1 ARID domain. (from UniProt F5GZR8)
KDM5A (ENST00000541335.1) at chr12:322263-323154 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000540838.1) at chr12:285456-292925 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000540168.1) at chr12:323595-329170 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000540156.1) at chr12:306894-307773 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000536014.5) at chr12:366046-388530 - Contains 1 ARID domain. (from UniProt F5H322)
KDM5A (ENST00000535269.1) at chr12:309894-311214 - lysine demethylase 5A (from HGNC KDM5A)
KDM5A (ENST00000535014.5) at chr12:365970-389264 - Contains 1 ARID domain. (from UniProt F5GZ99)
LMO2 (ENST00000411482.1) at chr11:33858576-33869536 - Acts with TAL1/SCL to regulate red blood cell  development. Also acts with LDB1 to maintain erythroid precursors  in an immature state. (from UniProt P25791)
MYC (ENST00000652288.1) at chr8:127737621-127741434 - Participates in the regulation of gene transcription.  Binds DNA in a non-specific manner, yet also specifically  recognizes the core sequence 5'-CAC[GA]TG-3'. Seems to activate  the transcription of growth-related genes. (from UniProt P01106)
MYC (ENST00000377970.6) at chr8:127736084-127741434 - Participates in the regulation of gene transcription.  Binds DNA in a non-specific manner, yet also specifically  recognizes the core sequence 5'-CAC[GA]TG-3'. Seems to activate  the transcription of growth-related genes. (from UniProt P01106)
MYC (ENST00000613283.2) at chr8:127736594-127740958 - Participates in the regulation of gene transcription.  Binds DNA in a non-specific manner, yet also specifically  recognizes the core sequence 5'-CAC[GA]TG-3'. Seems to activate  the transcription of growth-related genes. (from UniProt P01106)
GATAD1 (ENST00000287957.5) at chr7:92447482-92460075 - Homo sapiens GATA zinc finger domain containing 1 (GATAD1), transcript variant 2, non-coding RNA. (from RefSeq NR_052016)
MYCN (ENST00000281043.4) at chr2:15940550-15947004 - Homo sapiens MYCN proto-oncogene, bHLH transcription factor (MYCN), transcript variant 2, mRNA. (from RefSeq NM_005378)
LMO2 (ENST00000257818.3) at chr11:33858576-33892076 - Homo sapiens LIM domain only 2 (LMO2), transcript variant 1, mRNA. (from RefSeq NM_005574)
LMO2 (ENST00000395833.7) at chr11:33858576-33869816 - Homo sapiens LIM domain only 2 (LMO2), transcript variant 3, mRNA. (from RefSeq NM_001142316)
RBL1 (ENST00000344359.7) at chr20:37003574-37095989 - Homo sapiens RB transcriptional corepressor like 1 (RBL1), transcript variant 2, mRNA. (from RefSeq NM_183404)
RBL1 (ENST00000373664.8) at chr20:36996349-37095997 - Homo sapiens RB transcriptional corepressor like 1 (RBL1), transcript variant 1, mRNA. (from RefSeq NM_002895)
RB1 (ENST00000267163.5) at chr13:48303726-48481890 - Homo sapiens RB transcriptional corepressor 1 (RB1), mRNA. (from RefSeq NM_000321)
ESR1 (ENST00000440973.5) at chr6:151690496-152103274 - Homo sapiens estrogen receptor 1 (ESR1), transcript variant 4, mRNA. (from RefSeq NM_001122742)
ESR1 (ENST00000443427.5) at chr6:151807319-152103274 - Homo sapiens estrogen receptor 1 (ESR1), transcript variant 2, mRNA. (from RefSeq NM_001122740)
ESR1 (ENST00000206249.7) at chr6:151807551-152103274 - Homo sapiens estrogen receptor 1 (ESR1), transcript variant 6, mRNA. (from RefSeq NM_001291241)
ESR1 (ENST00000338799.9) at chr6:151804431-152099053 - Nuclear hormone receptor. The steroid hormones and their  receptors are involved in the regulation of eukaryotic gene  expression and affect cellular proliferation and differentiation  in target tissues. Ligand-dependent nuclear transactivation  involves either direct homodimer binding to a palindromic estrogen  response element (ERE) sequence or association with other DNA-  binding transcription factors, such as AP-1/c-Jun, c-Fos, ATF-2,  Sp1 and Sp3, to mediate ERE-independent signaling. Ligand binding  induces a conformational change allowing subsequent or  combinatorial association with multiprotein coactivator complexes  through LXXLL motifs of their respective components. Mutual  transrepression occurs between the estrogen receptor (ER) and NF-  kappa-B in a cell-type specific manner. Decreases NF-kappa-B DNA-  binding activity and inhibits NF-kappa-B-mediated transcription  from the IL6 promoter and displace RELA/p65 and associated  coregulators from the promoter. Recruited to the NF-kappa-B  response element of the CCL2 and IL8 promoters and can displace  CREBBP. Present with NF-kappa-B components RELA/p65 and NFKB1/p50  on ERE sequences. Can also act synergistically with NF-kappa-B to  activate transcription involving respective recruitment adjacent  response elements; the function involves CREBBP. Can activate the  transcriptional activity of TFF1. Also mediates membrane-initiated  estrogen signaling involving various kinase cascades. Isoform 3 is  involved in activation of NOS3 and endothelial nitric oxide  production. Isoforms lacking one or several functional domains are  thought to modulate transcriptional activity by competitive ligand  or DNA binding and/or heterodimerization with the full length  receptor. Isoform 3 can bind to ERE and inhibit isoform 1. (from UniProt P03372)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001042603.2 at chr12:280057-389455

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

KDM5A at chr12:280057-389320

RefSeq Genes

KDM5A at chr12:280057-389320 - (NM_001042603) lysine-specific demethylase 5A

Non-Human RefSeq Genes

KDM5A at chr12:284250-389264 - (NM_001205625) lysine-specific demethylase 5A
Kdm5a at chr12:281563-389336 - (NM_001277177) lysine-specific demethylase 5A isoform 1
Kdm5a at chr12:333475-389336 - (NM_001277178) lysine-specific demethylase 5A isoform 2
Kdm5a at chr12:283479-389336 - (NM_145997) lysine-specific demethylase 5A

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

KDM5A at chr12:280129-389454

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

KDM5A at chr12:280129-389454
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

KDM5A at chr12:280129-389454
KDM5A at chr12:284336-389246
KDM5A at chr12:285456-292925
KDM5A at chr12:306894-307773
KDM5A at chr12:309891-389282
KDM5A at chr12:309894-311214
KDM5A at chr12:322263-323154
KDM5A at chr12:323595-329170
KDM5A at chr12:333068-334328
KDM5A at chr12:365970-389264
KDM5A at chr12:366046-388530
KDM5A at chr12:384031-389273

International Knockout Mouse Consortium Genes Mapped to Human Genome

Kdm5a_118400 at chr12:280057-389454
Kdm5a_44334 at chr12:280057-389454
Kdm5a_93675 at chr12:280057-389454

Non-Human Aligned mRNA Search Results

KU871086 - Castor fiber Kdm5a (KDM5A) mRNA, complete cds.
JU327563 - TSA: Macaca mulatta Mamu_512554 mRNA sequence.
JU476643 - TSA: Macaca mulatta Mamu_382489 mRNA sequence.