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UCSC Genes

IL9R (uc004fnv.1) at chrX:155227246-155240482 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 1, mRNA.
IL9R (uc004fxn.1) at chrY:59330252-59343488 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 1, mRNA.
IL9R (uc010nvn.2) at chrX:155227246-155237484 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 1, mRNA.
IL9R (uc004fnu.1) at chrX:155227246-155240482 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 2, mRNA.
IL9R (uc010nxr.2) at chrY:59330252-59340490 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 1, mRNA.
IL9R (uc004fxm.1) at chrY:59330252-59343488 - Homo sapiens interleukin 9 receptor (IL9R), transcript variant 2, mRNA.
IL9 (uc003lbb.1) at chr5:135227935-135231516 - Homo sapiens interleukin 9 (IL9), mRNA.
JAK3 (uc002nhn.4) at chr19:17935593-17958841 - Homo sapiens Janus kinase 3 (JAK3), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_002186.2 at chrX:155227246-155240482
NM_176786.1 at chrX:155227246-155240482
NM_002186.2 at chrY:59330252-59343488
NM_176786.1 at chrY:59330252-59343488

RefSeq Genes

IL9R at chrX:155227361-155240482 - (NM_002186) interleukin-9 receptor isoform 1 precursor
IL9R at chrY:59330367-59343488 - (NM_002186) interleukin-9 receptor isoform 1 precursor
IL9R at chrY:59330367-59343488 - (NM_176786) interleukin-9 receptor isoform 2
IL9R at chrX:155227361-155240482 - (NM_176786) interleukin-9 receptor isoform 2

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

WASH and IL9R antisense RNA 2 at chr16:72916-75114 - (NR_130735.1)
WASH and IL9R antisense RNA 1 at chrX:155244229-155246495 - (NR_138048.1)
WASH and IL9R antisense RNA 1 at chrY:59347235-59349501 - (NR_138048.1)

Non-Human RefSeq Genes

Il9r at chrX:155232613-155239786 - (NM_017021) interleukin-9 receptor
Il9r at chrX:155227383-155239901 - (NM_008374) interleukin-9 receptor isoform 2 precursor
Il9r at chrY:59330389-59342794 - (NM_008374) interleukin-9 receptor isoform 2 precursor
Il9r at chrY:59330389-59342794 - (NM_001134458) interleukin-9 receptor isoform 1 precursor
Il9r at chrX:155227383-155239901 - (NM_001134458) interleukin-9 receptor isoform 1 precursor

Basic Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488

Comprehensive Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

IL9R at chrX:155227246-155240273
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from GENCODE Version 19

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59338785-59340717

Comprehensive Gene Annotation Set from GENCODE Version 19

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59338785-59340717

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155233883-155251689
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59336889-59354695

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155233883-155251689
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59336889-59354695
IL9R at chrY:59338785-59340717

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227361-155237484
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155233883-155251689
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330367-59340490
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59336889-59354695

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

IL9R at chrX:155227246-155240273
IL9R at chrX:155227246-155240482
IL9R at chrX:155227361-155237484
IL9R at chrX:155227371-155240482
IL9R at chrX:155227371-155240482
IL9R at chrX:155227399-155232635
IL9R at chrX:155233883-155251689
IL9R at chrX:155235779-155237711
IL9R at chrY:59330252-59343279
IL9R at chrY:59330252-59343488
IL9R at chrY:59330367-59340490
IL9R at chrY:59330377-59343488
IL9R at chrY:59330377-59343488
IL9R at chrY:59330405-59335641
IL9R at chrY:59336889-59354695
IL9R at chrY:59338785-59340717

Retroposed Genes V5, Including Pseudogenes

IL9R at chr22:17493251-17494270 - (NM_176786.1-12)
IL9R at chr22:17493251-17494270 - (NM_176786.1-12)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Il9r_116640 at chrY:59330252-59343488
Il9r_118373 at chrY:59330252-59343488
Il9r_39591 at chrY:59330252-59343488

BC051337 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2032  100.0%          X     + 155227371 155240482  BC051337     1  2032  2050
 2032  100.0%          Y     +  59330377  59343488  BC051337     1  2032  2050

Human Unaligned mRNA Search Results

NR_130735 - Homo sapiens WASH and IL9R antisense RNA 2 (WASIR2), long non-coding RNA.
NR_138048 - Homo sapiens WASH and IL9R antisense RNA 1 (WASIR1), long non-coding RNA.

Non-Human Aligned mRNA Search Results

BC111909 - Mus musculus interleukin 9 receptor, mRNA (cDNA clone MGC:130502 IMAGE:40046258), complete cds.
HF567919 - Canis lupus familiaris partial mRNA for interleukin 9 receptor (IL9R gene).

Ensembl Genes

IL9R at chrX:155227399-155232635 - (ENST00000489233)
IL9R at chrX:155227371-155240482 - (ENST00000540897)
IL9R at chrX:155227246-155240482 - (ENST00000424344)
IL9RP3 at chr16:79336-88321 - (ENST00000442856)
IL9RP2 at chr10:126334-132205 - (ENST00000423948)
IL9RP4 at chr18:80140-88570 - (ENST00000571755)
IL9R at chrX:155227246-155240273 - (ENST00000244174)
IL9R at chrX:155227371-155240482 - (ENST00000369423)
IL9R at chrX:155235779-155237711 - (ENST00000494962)

Vega Protein-Coding Annotations

OTTHUMT00000058981 at chrX:155227246-155240273
OTTHUMT00000058980 at chrX:155227371-155240482
OTTHUMT00000058982 at chrX:155227399-155232635
OTTHUMT00000058983 at chrX:155233883-155251689
OTTHUMT00000058984 at chrX:155235779-155237711

Vega Annotated Pseudogenes and Immunoglobulin Segments

OTTHUMT00000046379 at chr10:126334-132205