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UCSC Genes

HAO2 (uc001ehr.1) at chr1:119911402-119936751 - Homo sapiens hydroxyacid oxidase 2 (long chain) (HAO2), transcript variant 1, mRNA.
HAO2 (uc001ehq.1) at chr1:119911402-119936751 - Homo sapiens hydroxyacid oxidase 2 (long chain) (HAO2), transcript variant 2, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_016527.3 at chr1:119911399-119936753
NM_001005783.2 at chr1:119911399-119936753
NR_046780.1 at chr1:119911569-119912954

RefSeq Genes

HAO2 at chr1:119911408-119936753 - (NM_001005783) hydroxyacid oxidase 2 isoform 2
HAO2 at chr1:119911408-119936753 - (NM_016527) hydroxyacid oxidase 2 isoform 1
HAO2-IT1 at chr1:119911569-119912953 - (NR_046780) 

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

HAO2 intronic transcript 1 at chr1:119911569-119912954 - (NR_046780.1)

Non-Human RefSeq Genes

hao2 at chr1:119925536-119934882 - (NM_001030453) hydroxyacid oxidase 2
hao2 at chr1:119923706-119936466 - (NM_200483) hydroxyacid oxidase 2
HAO2 at chr1:119923699-119937750 - (NM_001035071) hydroxyacid oxidase 2
Hao2 at chr1:119925536-119936463 - (NM_032082) hydroxyacid oxidase 2
Hao2 at chr1:119923704-120134035 - (NM_019545) hydroxyacid oxidase 2
Hao2 at chr1:120143957-120151673 - (NM_001310567) 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
Hao2 at chr1:119981618-119988875 - (NM_001310567) 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
hao2.L at chr1:119925536-119934882 - (NM_001089031) uncharacterized protein LOC398510
hao2.S at chr1:119925536-119934882 - (NM_001092640) hydroxyacid oxidase 2 (long chain) S homeolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911402-119936751
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from GENCODE Version 19

HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Comprehensive Gene Annotation Set from GENCODE Version 19

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

HAO2 at chr1:119911402-119929317
HAO2 at chr1:119911432-119936753
HAO2 at chr1:119911461-119936751
HAO2 at chr1:119935062-119936737

International Knockout Mouse Consortium Genes Mapped to Human Genome

Hao2_31359 at chr1:119911402-119936751
Hao2_31360 at chr1:119911402-119936751
Hao2_89244 at chr1:119911402-119936751

BC020863 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1640  100.0%          1     + 119911432 119936725  BC020863     1  1640  1670

Non-Human Aligned mRNA Search Results

BC078781 - Rattus norvegicus hydroxyacid oxidase 2 (long chain), mRNA (cDNA clone MGC:93324 IMAGE:7132928), complete cds.
AF272947 - Mus musculus long-chain L-2-hydroxy acid oxidase (hao2) mRNA, complete cds.
BC055205 - Danio rerio hydroxyacid oxidase 2 (long chain), mRNA (cDNA clone MGC:63690 IMAGE:5916060), complete cds.
BC103070 - Bos taurus hydroxyacid oxidase 2 (long chain), mRNA (cDNA clone MGC:128394 IMAGE:7989840), complete cds.

Ensembl Genes

HAO2-IT1 at chr1:119911569-119912954 - (ENST00000419144)
HAO2 at chr1:119911432-119936753 - (ENST00000361035)
HAO2 at chr1:119911402-119929317 - (ENST00000457318)
HAO2 at chr1:119911461-119936751 - (ENST00000325945)
HAO2 at chr1:119935062-119936737 - (ENST00000482991)

Vega Protein-Coding Annotations

OTTHUMT00000034985 at chr1:119911402-119929317
OTTHUMT00000034532 at chr1:119911432-119936753
OTTHUMT00000034984 at chr1:119911461-119936751
OTTHUMT00000034986 at chr1:119935062-119936737