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Gencode Genes

FOXN1 (ENST00000579795.5) at chr17:28506260-28537436 - Transcriptional regulator involved in development. (from UniProt O15353)
FOXN1 (ENST00000577936.1) at chr17:28506243-28524731 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KRT9)
FOXN1 (ENST00000226247.2) at chr17:28523941-28538896 - Homo sapiens forkhead box N1 (FOXN1), transcript variant 2, mRNA. (from RefSeq NM_003593)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_003593.2 at chr17:28523941-28538157

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017025228.1 at chr17:28506211-28538900
XM_011525368.2 at chr17:28506212-28538900
XM_005258046.3 at chr17:28506231-28538900
XM_011525358.1 at chr17:28506231-28538900
XM_017025231.1 at chr17:28506243-28535109
XM_017025230.1 at chr17:28506243-28538900
XM_017025229.1 at chr17:28506243-28538900
XM_011525359.1 at chr17:28506243-28538900
XM_011525362.1 at chr17:28506347-28538900
XM_011525370.2 at chr17:28525182-28538900
XM_011525369.2 at chr17:28525182-28538900
XM_011525367.1 at chr17:28525570-28538900

RefSeq Genes

FOXN1 at chr17:28523941-28538157 - (NM_003593) forkhead box protein N1
FOXN1 at chr17:28506348-28538900 - (NM_001369369) forkhead box protein N1

Non-Human RefSeq Genes

Foxn1 at chr17:28523961-28537847 - (NM_001100648) forkhead box protein N1
FOXN1 at chr17:28523970-28537503 - (NM_001192452) forkhead box protein N1
Foxn1 at chr17:28506330-28538894 - (NM_008238) forkhead box protein N1 isoform 1
Foxn1 at chr17:28506330-28538894 - (NM_001277290) forkhead box protein N1 isoform 2

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FOXN1 at chr17:28506243-28524731
FOXN1 at chr17:28506260-28537436
FOXN1 at chr17:28523941-28538896

International Knockout Mouse Consortium Genes Mapped to Human Genome

Foxn1_26529 at chr17:28523941-28538157
Foxn1_26530 at chr17:28523941-28538157
Foxn1_26531 at chr17:28523941-28538157
Foxn1_65673 at chr17:28523941-28538157
Foxn1_87145 at chr17:28523941-28538157
Foxn1_VG18839 at chr17:28523941-28538157

AK313878 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2145  100.0%         17     +  28506260  28537436  AK313878     1  2145  2145

Non-Human Aligned mRNA Search Results

FJ187748 - Scyliorhinus canicula Foxn1 protein (Foxn1) mRNA, partial cds.
BC108980 - Mus musculus forkhead box N1, mRNA (cDNA clone MGC:124316 IMAGE:40047616), complete cds.
BC108981 - Mus musculus forkhead box N1, mRNA (cDNA clone MGC:124317 IMAGE:40047617), complete cds.
JQ182306 - Xenopus laevis forkead box protein N1 (Foxn1) mRNA, partial cds.