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UCSC Genes

FOXN1 (uc002hbj.3) at chr17:26850959-26865175 - Homo sapiens forkhead box N1 (FOXN1), mRNA.
FOXN1 (uc010crm.3) at chr17:26833278-26865175 - Homo sapiens forkhead box N1 (FOXN1), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_003593.2 at chr17:26850959-26865175

RefSeq Genes

FOXN1 at chr17:26850959-26865175 - (NM_003593) forkhead box protein N1
FOXN1 at chr17:26833366-26865918 - (NM_001369369) forkhead box protein N1

Non-Human RefSeq Genes

Foxn1 at chr17:26850979-26864918 - (NM_001100648) forkhead box protein N1
FOXN1 at chr17:26850988-26864478 - (NM_001192452) forkhead box protein N1
Foxn1 at chr17:26833348-26865912 - (NM_008238) forkhead box protein N1 isoform 1
Foxn1 at chr17:26833348-26865912 - (NM_001277290) forkhead box protein N1 isoform 2

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from GENCODE Version 19

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from GENCODE Version 19

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

FOXN1 at chr17:26833261-26851749
FOXN1 at chr17:26833278-26864454
FOXN1 at chr17:26850959-26865914

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

FOXN1 at chr17:26850959-26865914

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

FOXN1 at chr17:26850959-26865914

International Knockout Mouse Consortium Genes Mapped to Human Genome

Foxn1_26529 at chr17:26850959-26865175
Foxn1_26530 at chr17:26850959-26865175
Foxn1_26531 at chr17:26850959-26865175
Foxn1_65673 at chr17:26850959-26865175
Foxn1_87145 at chr17:26850959-26865175
Foxn1_VG18839 at chr17:26850959-26865175

AK313878 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2145  100.0%         17     +  26833278  26864454  AK313878     1  2145  2145

Non-Human Aligned mRNA Search Results

FJ187748 - Scyliorhinus canicula Foxn1 protein (Foxn1) mRNA, partial cds.
BC108980 - Mus musculus forkhead box N1, mRNA (cDNA clone MGC:124316 IMAGE:40047616), complete cds.
BC108981 - Mus musculus forkhead box N1, mRNA (cDNA clone MGC:124317 IMAGE:40047617), complete cds.
JQ182306 - Xenopus laevis forkead box protein N1 (Foxn1) mRNA, partial cds.

Ensembl Genes

FOXN1 at chr17:26833278-26864454 - (ENST00000579795)
FOXN1 at chr17:26833261-26851749 - (ENST00000577936)
FOXN1 at chr17:26850959-26865914 - (ENST00000226247)

Vega Protein-Coding Annotations

OTTHUMT00000255832 at chr17:26850959-26865914