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Gencode Genes

FOXD3-AS1 (ENST00000418244.5) at chr1:63320884-63322436 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 1, long non-coding RNA. (from RefSeq NR_121634)
FOXD3 (ENST00000371116.4) at chr1:63322567-63325128 - Homo sapiens forkhead box D3 (FOXD3), mRNA. (from RefSeq NM_012183)
FOXD3-AS1 (ENST00000449386.5) at chr1:63320884-63322458 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 2, long non-coding RNA. (from RefSeq NR_121635)
FOXD3-AS1 (ENST00000431294.5) at chr1:63320884-63323582 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 3, long non-coding RNA. (from RefSeq NR_121636)
FOXD3-AS1 (ENST00000427268.1) at chr1:63320884-63324441 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 4, long non-coding RNA. (from RefSeq NR_121637)
FOXD3-AS1 (ENST00000426393.5) at chr1:63320884-63321529 - FOXD3 antisense RNA 1 (from HGNC FOXD3-AS1)
POU5F1 (ENST00000451077.6) at chr6_GL000251v2_alt:2646761-2648702 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000429314.2) at chr6_GL000256v2_alt:2467753-2469694 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000412166.6) at chr6_GL000252v2_alt:2423653-2425594 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000433348.2) at chr6_GL000253v2_alt:2474838-2476779 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000419095.2) at chr6_GL000254v2_alt:2508452-2510393 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000376243.8) at chr6_GL000255v2_alt:2422370-2424311 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA. (from RefSeq NM_203289)
POU5F1 (ENST00000434616.2) at chr6_GL000252v2_alt:2423653-2430027 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000454714.6) at chr6_GL000253v2_alt:2474838-2481213 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000433063.6) at chr6_GL000254v2_alt:2508452-2514827 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000383524.4) at chr6_GL000255v2_alt:2422370-2428743 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000429603.2) at chr6_GL000251v2_alt:2646761-2653135 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000437747.6) at chr6_GL000256v2_alt:2467753-2474125 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)
POU5F1 (ENST00000259915.13) at chr6:31164337-31170682 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA. (from RefSeq NM_002701)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_012183.2 at chr1:63323059-63325126
NR_121634.1 at chr1:63320884-63322458
NR_121635.1 at chr1:63320884-63322458
NR_121636.1 at chr1:63320884-63323675
NR_121637.1 at chr1:63320884-63324441

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

FOXD3 at chr1:63322567-63325128

RefSeq Genes

FOXD3 at chr1:63322567-63325128 - (NM_012183) forkhead box protein D3
FOXD3-AS1 at chr1:63320884-63322458 - (NR_121635) 
FOXD3-AS1 at chr1:63320884-63323675 - (NR_121636) 
FOXD3-AS1 at chr1:63320884-63324441 - (NR_121637) 
FOXD3-AS1 at chr1:63320884-63322458 - (NR_121634) 

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

FOXD3 antisense RNA 1 (head to head), transcript variant 3 at chr1:63320884-63323675 - (NR_121636.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 1 at chr1:63320884-63322458 - (NR_121634.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 2 at chr1:63320884-63322458 - (NR_121635.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 4 at chr1:63320884-63324441 - (NR_121637.1)

Non-Human RefSeq Genes

FOXD3 at chr1:63323059-63325127 - (NM_001198733) forkhead box protein D3
foxd3 at chr1:63323070-63324411 - (NM_001160453) forkhead box protein D3
foxd3 at chr1:63323056-63325122 - (NM_001011383) forkhead box protein D3
FOXD3 at chr5:73447257-73448057 - (NM_204951) forkhead box protein D3
FOXD3 at chr1:63323056-63324495 - (NM_204951) forkhead box protein D3
Foxd3 at chr1:63322727-63325126 - (NM_010425) forkhead box protein D3
foxd3 at chr1:63323059-63324411 - (NM_131290) forkhead box protein D3
foxd3.L at chr1:63323056-63325122 - (NM_001085557) forkhead box protein D3-A
foxd3.S at chr1:63323056-63325129 - (NM_001085609) forkhead box protein D3-B

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FOXD3 at chr1:63323041-63325126

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FOXD3 at chr1:63323041-63325126

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FOXD3 at chr1:63323041-63325126

Retroposed Genes V9, Including Pseudogenes

FOXD3-AS1 at chr1:181325661-181326157 - (NR_121634.1-2)
FOXD3 at chr3:49585204-49585625 - (NR_121637.1-3)

Human Aligned mRNA Search Results

KJ493778 - Homo sapiens FOXD3 promoter-associated antisense long non-coding RNA lncRNA gene, complete sequence.
KF925354 - Homo sapiens FOXD3 antisense RNA 6, complete sequence.
KF925353 - Homo sapiens FOXD3 antisense RNA 5, complete sequence.
KF925352 - Homo sapiens FOXD3 antisense RNA 4, complete sequence.
KF925351 - Homo sapiens FOXD3 antisense RNA 3, complete sequence.
KF925350 - Homo sapiens FOXD3 antisense RNA 2, complete sequence.
KF925349 - Homo sapiens FOXD3 antisense RNA 1, complete sequence.

Human Unaligned mRNA Search Results

NR_121635 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 2, long non-coding RNA.
NR_121636 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 3, long non-coding RNA.
NR_121637 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 4, long non-coding RNA.
NR_121634 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 1, long non-coding RNA.

Non-Human Aligned mRNA Search Results

BC123272 - Xenopus laevis forkhead box D3, mRNA (cDNA clone MGC:154543 IMAGE:8321039), complete cds.
BC072772 - Xenopus laevis winged helix transcription factor, mRNA (cDNA clone MGC:79918 IMAGE:5156275), complete cds.
KJ194833 - Bubalus bubalis FoxD3 mRNA, partial cds.
MF281542 - Leucoraja erinacea forkhead Box D3 (FoxD3) mRNA, partial cds.
AJ298866 - Xenopus laevis mRNA for winged helix transcription factor (foxd3b gene).
DQ096918 - Xenopus laevis foxd3b mRNA, complete sequence.
AF067421 - Mus musculus HNF3/forkhead homolog 2 (Foxd3) mRNA, complete cds.
BC152802 - Synthetic construct Mus musculus clone IMAGE:100016044, MGC:184343 forkhead box D3 (Foxd3) mRNA, encodes complete protein.
BC156564 - Synthetic construct Mus musculus clone IMAGE:100062040, MGC:190334 forkhead box D3 (Foxd3) mRNA, encodes complete protein.
JN796407 - Bubalus bubalis forkhead box protein D3 (FOXD3) mRNA, partial cds.
JQ284047 - Capra hircus forkhead box D3 (FOXD3) mRNA, partial cds.
KT906462 - Maylandia zebra forkhead Box D3 (foxd3) mRNA, partial cds.
MG134525 - Synthetic construct Xenopus tropicalis clone IMAGE:6988210 forkhead box D3 (foxd3) gene, encodes complete protein.
CR760163 - Xenopus tropicalis finished cDNA, clone TNeu088c09.
BC088566 - Xenopus tropicalis forkhead box D3, mRNA (cDNA clone MGC:97754 IMAGE:6988210), complete cds.
BC095603 - Danio rerio forkhead box D3, mRNA (cDNA clone MGC:111934 IMAGE:7432677), complete cds.