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UCSC Genes

FOXD3 (uc001dax.2) at chr1:63788730-63790797 - Homo sapiens forkhead box D3 (FOXD3), mRNA.
POU5F1 (uc003nsv.3) at chr6:31132114-31138451 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011fby.2) at chr6_cox_hap2:2646867-2653222 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011gak.2) at chr6_dbb_hap3:2429238-2435593 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011gwl.2) at chr6_mann_hap4:2480458-2486814 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011how.2) at chr6_mcf_hap5:2514037-2520393 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011imj.2) at chr6_qbl_hap6:2427966-2434320 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011jht.2) at chr6_ssto_hap7:2467051-2473404 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc021yuj.1) at chr6:31132114-31134615 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc003nsu.3) at chr6:31132114-31134615 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zkv.1) at chr6_cox_hap2:2646867-2649380 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011fbx.2) at chr6_cox_hap2:2646867-2649380 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021znh.1) at chr6_dbb_hap3:2429238-2431751 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011gaj.2) at chr6_dbb_hap3:2429238-2431751 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zpb.1) at chr6_mann_hap4:2480458-2482971 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011gwk.2) at chr6_mann_hap4:2480458-2482971 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zro.1) at chr6_mcf_hap5:2514037-2516550 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011hov.2) at chr6_mcf_hap5:2514037-2516550 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021ztw.1) at chr6_qbl_hap6:2427966-2430479 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011imi.2) at chr6_qbl_hap6:2427966-2430479 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zwd.1) at chr6_ssto_hap7:2467051-2469564 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011jhs.2) at chr6_ssto_hap7:2467051-2469564 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_012183.2 at chr1:63788730-63790797
NR_121634.1 at chr1:63786555-63788129
NR_121635.1 at chr1:63786555-63788129
NR_121636.1 at chr1:63786555-63789346
NR_121637.1 at chr1:63786555-63790112

RefSeq Genes

FOXD3 at chr1:63788238-63790799 - (NM_012183) forkhead box protein D3
FOXD3-AS1 at chr1:63786555-63788129 - (NR_121635) 
FOXD3-AS1 at chr1:63786555-63789346 - (NR_121636) 
FOXD3-AS1 at chr1:63786555-63790112 - (NR_121637) 
FOXD3-AS1 at chr1:63786555-63788129 - (NR_121634) 

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

FOXD3 antisense RNA 1 (head to head), transcript variant 3 at chr1:63786555-63789346 - (NR_121636.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 1 at chr1:63786555-63788129 - (NR_121634.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 2 at chr1:63786555-63788129 - (NR_121635.1)
FOXD3 antisense RNA 1 (head to head), transcript variant 4 at chr1:63786555-63790112 - (NR_121637.1)

Non-Human RefSeq Genes

FOXD3 at chr1:63788730-63790798 - (NM_001198733) forkhead box protein D3
foxd3 at chr1:63788741-63790082 - (NM_001160453) forkhead box protein D3
foxd3 at chr1:47904174-47904482 - (NM_001160453) forkhead box protein D3
foxd3 at chr1:63788727-63790793 - (NM_001011383) forkhead box protein D3
FOXD3 at chr1:63788727-63790548 - (NM_204951) forkhead box protein D3
Foxd3 at chr1:63788505-63790797 - (NM_010425) forkhead box protein D3
foxd3 at chr1:63788730-63790082 - (NM_131290) forkhead box protein D3
foxd3.L at chr1:63788727-63790793 - (NM_001085557) forkhead box protein D3-A
foxd3.S at chr1:63788726-63790800 - (NM_001085609) forkhead box protein D3-B

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

FOXD3 at chr1:63788712-63790797

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

FOXD3 at chr1:63788712-63790797

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

FOXD3 at chr1:63788712-63790797

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

FOXD3 at chr1:63788712-63790797

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

FOXD3 at chr1:63788712-63790797

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

FOXD3 at chr1:63788712-63790797

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

FOXD3 at chr1:63788712-63790797

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

FOXD3 at chr1:63788712-63790797

Basic Gene Annotation Set from GENCODE Version 19

FOXD3 at chr1:63788730-63790797

Comprehensive Gene Annotation Set from GENCODE Version 19

FOXD3 at chr1:63788730-63790797

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

FOXD3 at chr1:63788730-63790797

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

FOXD3 at chr1:63788730-63790797

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

FOXD3 at chr1:63788730-63790797

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

FOXD3 at chr1:63788730-63790797

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

FOXD3 at chr1:63788730-63790797

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

FOXD3 at chr1:63788730-63790797

Human Aligned mRNA Search Results

KJ493778 - Homo sapiens FOXD3 promoter-associated antisense long non-coding RNA lncRNA gene, complete sequence.
KF925354 - Homo sapiens FOXD3 antisense RNA 6, complete sequence.
KF925353 - Homo sapiens FOXD3 antisense RNA 5, complete sequence.
KF925352 - Homo sapiens FOXD3 antisense RNA 4, complete sequence.
KF925351 - Homo sapiens FOXD3 antisense RNA 3, complete sequence.
KF925350 - Homo sapiens FOXD3 antisense RNA 2, complete sequence.
KF925349 - Homo sapiens FOXD3 antisense RNA 1, complete sequence.

Human Unaligned mRNA Search Results

NR_121635 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 2, long non-coding RNA.
NR_121636 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 3, long non-coding RNA.
NR_121637 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 4, long non-coding RNA.
NR_121634 - Homo sapiens FOXD3 antisense RNA 1 (FOXD3-AS1), transcript variant 1, long non-coding RNA.

Non-Human Aligned mRNA Search Results

BC123272 - Xenopus laevis forkhead box D3, mRNA (cDNA clone MGC:154543 IMAGE:8321039), complete cds.
BC072772 - Xenopus laevis winged helix transcription factor, mRNA (cDNA clone MGC:79918 IMAGE:5156275), complete cds.
KJ194833 - Bubalus bubalis FoxD3 mRNA, partial cds.
MF281542 - Leucoraja erinacea forkhead Box D3 (FoxD3) mRNA, partial cds.
AJ298866 - Xenopus laevis mRNA for winged helix transcription factor (foxd3b gene).
DQ096918 - Xenopus laevis foxd3b mRNA, complete sequence.
AF067421 - Mus musculus HNF3/forkhead homolog 2 (Foxd3) mRNA, complete cds.
BC152802 - Synthetic construct Mus musculus clone IMAGE:100016044, MGC:184343 forkhead box D3 (Foxd3) mRNA, encodes complete protein.
BC156564 - Synthetic construct Mus musculus clone IMAGE:100062040, MGC:190334 forkhead box D3 (Foxd3) mRNA, encodes complete protein.
JN796407 - Bubalus bubalis forkhead box protein D3 (FOXD3) mRNA, partial cds.
JQ284047 - Capra hircus forkhead box D3 (FOXD3) mRNA, partial cds.
KT906462 - Maylandia zebra forkhead Box D3 (foxd3) mRNA, partial cds.
MG134525 - Synthetic construct Xenopus tropicalis clone IMAGE:6988210 forkhead box D3 (foxd3) gene, encodes complete protein.
CR760163 - Xenopus tropicalis finished cDNA, clone TNeu088c09.
BC088566 - Xenopus tropicalis forkhead box D3, mRNA (cDNA clone MGC:97754 IMAGE:6988210), complete cds.
BC095603 - Danio rerio forkhead box D3, mRNA (cDNA clone MGC:111934 IMAGE:7432677), complete cds.

Ensembl Genes

FOXD3 at chr1:63788730-63790797 - (ENST00000371116)

Vega Protein-Coding Annotations

OTTHUMT00000025331 at chr1:63788712-63790797