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Gencode Genes

FIG4 (ENST00000230124.7) at chr6:109691312-109825428 - Homo sapiens FIG4 phosphoinositide 5-phosphatase (FIG4), mRNA. (from RefSeq NM_014845)
FIG4 (ENST00000454215.5) at chr6:109701720-109738453 - FIG4 phosphoinositide 5-phosphatase (from HGNC FIG4)
FIG4 (ENST00000419951.1) at chr6:109786006-109791571 - FIG4 phosphoinositide 5-phosphatase (from HGNC FIG4)
FIG4 (ENST00000415980.1) at chr6:109766729-109785744 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0Y6G7)
FIG4 (ENST00000368941.1) at chr6:109716506-109743480 - FIG4 phosphoinositide 5-phosphatase (from HGNC FIG4)
VAC14 (ENST00000536184.6) at chr16:70687442-70700245 - The PI(3,5)P2 regulatory complex regulates both the  synthesis and turnover of phosphatidylinositol 3,5-bisphosphate  (PtdIns(3,5)P2). Acts as a positive activator of PIKfyve kinase  activity. Also required to maintain normal levels of  phosphatidylinositol 3-phosphate (PtdIns(3)P) and  phosphatidylinositol 5-phosphate (PtdIns(5)P). Plays a role in the  biogenesis of endosome carrier vesicles (ECV) / multivesicular  bodies (MVB) transport intermediates from early endosomes. (from UniProt Q08AM6)
PIKFYVE (ENST00000308862.10) at chr2:208266278-208305128 - The PI(3,5)P2 regulatory complex regulates both the  synthesis and turnover of phosphatidylinositol 3,5-bisphosphate  (PtdIns(3,5)P2). Catalyzes the phosphorylation of  phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-  inositol ring, to form phosphatidylinositol 3,5-bisphosphate.  Required for endocytic-vacuolar pathway and nuclear migration.  Plays a role in the biogenesis of endosome carrier vesicles (ECV)/  multivesicular bodies (MVB) transport intermediates from early  endosomes. (from UniProt Q9Y2I7)
VAC14 (ENST00000261776.10) at chr16:70687439-70801158 - Homo sapiens VAC14 component of PIKFYVE complex (VAC14), transcript variant 1, mRNA. (from RefSeq NM_018052)
PIKFYVE (ENST00000264380.9) at chr2:208266255-208358746 - Homo sapiens phosphoinositide kinase, FYVE-type zinc finger containing (PIKFYVE), transcript variant 2, mRNA. (from RefSeq NM_015040)
PIKFYVE (ENST00000407449.5) at chr2:208266278-208305128 - Homo sapiens phosphoinositide kinase, FYVE-type zinc finger containing (PIKFYVE), transcript variant 4, mRNA. (from RefSeq NM_001178000)
PIKFYVE (ENST00000392202.7) at chr2:208266267-208305549 - Homo sapiens phosphoinositide kinase, FYVE-type zinc finger containing (PIKFYVE), transcript variant 3, mRNA. (from RefSeq NM_152671)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_014845.5 at chr6:109691221-109825431

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017011591.2 at chr6:109691296-109789574
XM_017011592.1 at chr6:109691296-109825431
XM_017011593.2 at chr6:109691296-109825431
XM_011536281.3 at chr6:109700909-109825431

RefSeq Genes

FIG4 at chr6:109691221-109825431 - (NM_014845) polyphosphoinositide phosphatase

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

FIG4 phosphoinositide 5-phosphatase at chr6:109691221-109825431 - (NM_014845.5)

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

FIG4 phosphoinositide 5-phosphatase, transcript variant X3 at chr6:109691296-109825431 - (XM_017011592.1)
FIG4 phosphoinositide 5-phosphatase, transcript variant X1 at chr6:109700909-109825431 - (XM_011536281.3)
FIG4 phosphoinositide 5-phosphatase, transcript variant X2 at chr6:109691296-109789574 - (XM_017011591.2)
FIG4 phosphoinositide 5-phosphatase, transcript variant X4 at chr6:109691296-109825431 - (XM_017011593.2)

Non-Human RefSeq Genes

FIG4 at chr6:109691364-109825414 - (NM_001172433) polyphosphoinositide phosphatase
FIG4 at chr6:109691343-109825295 - (NM_001243250) polyphosphoinositide phosphatase
Fig4 at chr6:109691433-109825265 - (NM_001047096) polyphosphoinositide phosphatase
FIG4 at chr6:109691393-109825284 - (NM_001114625) polyphosphoinositide phosphatase
FIG4 at chr6:109691427-109825281 - (NM_001076014) polyphosphoinositide phosphatase
FIG4 at chr6:109690422-109825426 - (NM_001114624) polyphosphoinositide phosphatase
FIG4 at chr6:109715078-109825265 - (NM_001114623) polyphosphoinositide phosphatase precursor
Fig4 at chr6:109691389-109825265 - (NM_133999) polyphosphoinositide phosphatase

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109716506-109743480

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

FIG4 at chr6:109691312-109825428
FIG4 at chr6:109701720-109738453
FIG4 at chr6:109716506-109743480
FIG4 at chr6:109766729-109785744
FIG4 at chr6:109786006-109791571

International Knockout Mouse Consortium Genes Mapped to Human Genome

Fig4_34637 at chr6:109691221-109825431
Fig4_34638 at chr6:109691221-109825431
Fig4_71351 at chr6:109691221-109825431
Fig4_75805 at chr6:109691221-109825431
Fig4_82676 at chr6:109691221-109825431
Fig4_VG13463 at chr6:109691221-109825431

BC041338 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 3058  100.0%          6     + 109691265 109825428  BC041338     1  3058  3074

Non-Human Aligned mRNA Search Results

JP010005 - TSA: Mustela putorius furo MPF81005213contig1/1 mRNA sequence.
BC114694 - Bos taurus FIG4 homolog (S. cerevisiae), mRNA (cDNA clone MGC:137930 IMAGE:8081578), complete cds.
BC015295 - Mus musculus FIG4 homolog (S. cerevisiae), mRNA (cDNA clone MGC:19159 IMAGE:4221630), complete cds.
BC031887 - Mus musculus FIG4 homolog (S. cerevisiae), mRNA (cDNA clone MGC:36652 IMAGE:5363304), complete cds.
KF896558 - Panthera tigris altaica clone PTA13161 polyphosphoinositide phosphatase (FIG4) mRNA, partial cds.
JT405878 - TSA: Ictalurus punctatus clc_264364 mRNA sequence.
JU319900 - TSA: Macaca mulatta Mamu_503794 mRNA sequence.
JU470710 - TSA: Macaca mulatta Mamu_363106 mRNA sequence.
JV044686 - TSA: Macaca mulatta Mamu_419237 mRNA sequence.

GeneReviews

FIG4 at chr6:109691312-109825428