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UCSC Genes

EXOSC9 (uc003idz.3) at chr4:122722472-122738176 - Homo sapiens exosome component 9 (EXOSC9), transcript variant 1, mRNA.
EXOSC9 (uc010inp.1) at chr4:122725777-122735782 - Homo sapiens exosome component 9 (EXOSC9), transcript variant 2, mRNA.
EXOSC9 (uc003ieb.3) at chr4:122722748-122738176 - Homo sapiens exosome component 9 (EXOSC9), transcript variant 2, mRNA.
EXOSC9 (uc003iea.3) at chr4:122722472-122738176 - Homo sapiens exosome component 9 (EXOSC9), transcript variant 2, mRNA.
EXOSC3 (uc004aal.3) at chr9:37779711-37785089 - Homo sapiens exosome component 3 (EXOSC3), transcript variant 1, mRNA.
SUMO1 (uc002uyz.1) at chr2:203070903-203103322 - Homo sapiens small ubiquitin-like modifier 1 (SUMO1), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_005033.2 at chr4:122722472-122738176
NM_001034194.1 at chr4:122722472-122738176

RefSeq Genes

EXOSC9 at chr4:122722478-122738176 - (NM_001034194) exosome complex component RRP45 isoform 1
EXOSC9 at chr4:122722478-122738176 - (NM_005033) exosome complex component RRP45 isoform 2

Non-Human RefSeq Genes

exosc9 at chr4:122722580-122735108 - (NM_001126754) exosome complex component RRP45
EXOSC9 at chr4:122722580-122737609 - (NM_001034828) exosome complex component RRP45
Exosc9 at chr4:122722571-122738107 - (NM_001025406) exosome complex component RRP45
EXOSC9 at chr4:122722580-122738048 - (NM_001035053) exosome complex component RRP45
Exosc9 at chr4:122722571-122737615 - (NM_019393) exosome complex component RRP45
exosc9 at chr4:122722589-122735154 - (NM_001006077) exosome complex component RRP45
exosc9.L at chr4:122722580-122737585 - (NM_001091970) exosome component 9 L homeolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from GENCODE Version 19

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from GENCODE Version 19

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722748-122738066

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

EXOSC9 at chr4:122722472-122738064
EXOSC9 at chr4:122722473-122736558
EXOSC9 at chr4:122722475-122738064
EXOSC9 at chr4:122722478-122738176
EXOSC9 at chr4:122722480-122732796
EXOSC9 at chr4:122722501-122732815
EXOSC9 at chr4:122722748-122738066
EXOSC9 at chr4:122723893-122734448
EXOSC9 at chr4:122725654-122729023
EXOSC9 at chr4:122725887-122735202
EXOSC9 at chr4:122725889-122735782
EXOSC9 at chr4:122731141-122737995

International Knockout Mouse Consortium Genes Mapped to Human Genome

Exosc9_29242 at chr4:122722472-122738176
Exosc9_29243 at chr4:122722472-122738176
Exosc9_89428 at chr4:122722472-122738176

BC142978 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1453  100.0%          4     + 122722506 122738070  BC142978     6  1458  1473

Non-Human Aligned mRNA Search Results

BC164713 - Danio rerio exosome component 9, mRNA (cDNA clone MGC:191888 IMAGE:100060197), complete cds.
BC158075 - Mus musculus exosome component 9, mRNA (cDNA clone MGC:189872 IMAGE:9007372), complete cds.
BC083243 - Danio rerio exosome component 9, mRNA (cDNA clone MGC:101680 IMAGE:7227094), complete cds.
BC005622 - Mus musculus exosome component 9, mRNA (cDNA clone MGC:11686 IMAGE:3711930), complete cds.
BC052156 - Mus musculus exosome component 9, mRNA (cDNA clone MGC:59294 IMAGE:6394529), complete cds.
BC097413 - Rattus norvegicus exosome component 9, mRNA (cDNA clone MGC:114458 IMAGE:7454278), complete cds.
BC104587 - Bos taurus exosome component 9, mRNA (cDNA clone MGC:128968 IMAGE:8120754), complete cds.
JT405769 - TSA: Ictalurus punctatus clc_264130 mRNA sequence.
JU335046 - TSA: Macaca mulatta Mamu_521041 mRNA sequence.

Ensembl Genes

EXOSC9 at chr4:122725889-122735782 - (ENST00000503139)
EXOSC9 at chr4:122725654-122729023 - (ENST00000506201)
EXOSC9 at chr4:122722748-122738066 - (ENST00000512454)
EXOSC9 at chr4:122722480-122732796 - (ENST00000511454)
EXOSC9 at chr4:122722475-122738064 - (ENST00000379663)
EXOSC9 at chr4:122722472-122738064 - (ENST00000243498)
EXOSC9 at chr4:122722473-122736558 - (ENST00000509980)
EXOSC9 at chr4:122722478-122738176 - (ENST00000513654)
EXOSC9 at chr4:122722501-122732815 - (ENST00000509800)
EXOSC9 at chr4:122723893-122734448 - (ENST00000508212)
EXOSC9 at chr4:122725887-122735202 - (ENST00000511132)
EXOSC9 at chr4:122731141-122737995 - (ENST00000503236)

Vega Protein-Coding Annotations

OTTHUMT00000250708 at chr4:122722472-122738064
OTTHUMT00000360745 at chr4:122722473-122736558
OTTHUMT00000360746 at chr4:122722475-122738064
OTTHUMT00000360747 at chr4:122722478-122738176
OTTHUMT00000360750 at chr4:122722480-122732796
OTTHUMT00000360751 at chr4:122722501-122732815
OTTHUMT00000360748 at chr4:122722748-122738066
OTTHUMT00000360752 at chr4:122723893-122734448
OTTHUMT00000360753 at chr4:122725654-122729023
OTTHUMT00000360754 at chr4:122725887-122735202
OTTHUMT00000360749 at chr4:122725889-122735782
OTTHUMT00000360755 at chr4:122731141-122737995