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Gencode Genes

ELF1 (ENST00000239882.7) at chr13:40931924-41019316 - Homo sapiens E74 like ETS transcription factor 1 (ELF1), transcript variant 1, mRNA. (from RefSeq NM_172373)
ELF1 (ENST00000635415.1) at chr13:40933439-40982899 - E74 like ETS transcription factor 1 (from HGNC ELF1)
ELF1 (ENST00000625359.1) at chr13:40933352-40982225 - Homo sapiens E74 like ETS transcription factor 1 (ELF1), transcript variant 2, mRNA. (from RefSeq NM_001145353)
ELF1 (ENST00000498824.4) at chr13:40932028-40982242 - E74 like ETS transcription factor 1 (from HGNC ELF1)
ELF1 (ENST00000405737.2) at chr13:40981983-41061440 - E74 like ETS transcription factor 1 (from HGNC ELF1)
HOXC13 (ENST00000243056.5) at chr12:53938831-53946544 - Homo sapiens homeobox C13 (HOXC13), mRNA. (from RefSeq NM_017410)
RUNX1 (ENST00000300305.7) at chr21:34787801-35049344 - CBF binds to the core site, 5'-PYGPYGGT-3', of a number  of enhancers and promoters, including murine leukemia virus,  polyomavirus enhancer, T-cell receptor enhancers, LCK, IL-3 and  GM-CSF promoters. The alpha subunit binds DNA and appears to have  a role in the development of normal hematopoiesis. Isoform AML-1L  interferes with the transactivation activity of RUNX1. Acts  synergistically with ELF4 to transactivate the IL-3 promoter and  with ELF2 to transactivate the mouse BLK promoter. Inhibits KAT6B-  dependent transcriptional activation. (from UniProt Q01196)
RUNX1 (ENST00000358356.9) at chr21:34821279-34888690 - Homo sapiens RUNX family transcription factor 1 (RUNX1), transcript variant 3, mRNA. (from RefSeq NM_001122607)
RUNX1 (ENST00000437180.5) at chr21:34787801-35049298 - Homo sapiens RUNX family transcription factor 1 (RUNX1), transcript variant 1, mRNA. (from RefSeq NM_001754)
RUNX1 (ENST00000344691.8) at chr21:34787801-34888690 - Homo sapiens RUNX family transcription factor 1 (RUNX1), transcript variant 2, mRNA. (from RefSeq NM_001001890)
SP1 (ENST00000426431.2) at chr12:53380639-53416446 - Homo sapiens Sp1 transcription factor (SP1), transcript variant 2, mRNA. (from RefSeq NM_003109)
SP1 (ENST00000327443.9) at chr12:53380176-53416446 - Homo sapiens Sp1 transcription factor (SP1), transcript variant 1, mRNA. (from RefSeq NM_138473)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001145353.1 at chr13:40931919-40982282
NM_001370331.1 at chr13:40931924-40982899
NM_001370332.1 at chr13:40931924-41019316
NM_172373.4 at chr13:40931924-41019316
NM_001370329.1 at chr13:40931924-41061386
NM_001370330.1 at chr13:40931924-41061386

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

ELF1 at chr13:40931924-41019316

RefSeq Genes

ELF1 at chr13:40931919-40982282 - (NM_001145353) ETS-related transcription factor Elf-1 isoform b
ELF1 at chr13:40931924-41019316 - (NM_172373) ETS-related transcription factor Elf-1 isoform a
ELF1 at chr13:40931924-41019316 - (NM_001370332) ETS-related transcription factor Elf-1 isoform a
ELF1 at chr13:40931924-40982899 - (NM_001370331) ETS-related transcription factor Elf-1 isoform a
ELF1 at chr13:40931924-41061386 - (NM_001370329) ETS-related transcription factor Elf-1 isoform c
ELF1 at chr13:40931924-41061386 - (NM_001370330) ETS-related transcription factor Elf-1 isoform a

Non-Human RefSeq Genes

ELF1 at chr13:40932182-40982284 - (NM_001260954) ETS-related transcription factor Elf-1
elf1 at chr13:40933596-40982066 - (NM_001079386) ETS-related transcription factor Elf-1
ELF1 at chr13:40932049-40982068 - (NM_001006269) ETS-related transcription factor Elf-1
Elf1 at chr13:40933011-40982086 - (NM_053520) ETS-related transcription factor Elf-1
Elf1 at chr13:40932062-41019319 - (NM_001286412) ETS-related transcription factor Elf-1 isoform 2
ELF1 at chr13:40932030-40982284 - (NM_001077853) ETS-related transcription factor Elf-1
Elf1 at chr13:40932062-41019319 - (NM_001286411) ETS-related transcription factor Elf-1 isoform 1
Elf1 at chr13:40932062-41061068 - (NM_007920) ETS-related transcription factor Elf-1 isoform 1
elf1.L at chr13:40933596-40982060 - (NM_001094760) E74 like ETS transcription factor 1 L homeolog
elf1.S at chr13:40933596-40982060 - (NM_001087213) E74 like ETS transcription factor 1 S homeolog

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

ELF1 at chr13:40931924-41019316
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

ELF1 at chr13:40931924-41019316
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ELF1 at chr13:40931924-41019316
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ELF1 at chr13:40931924-41019316
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40933439-40982899
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40933352-40982225
ELF1 at chr13:40981983-41061440

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932034-41019314

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ELF1 at chr13:40931920-41060940
ELF1 at chr13:40932028-40982242
ELF1 at chr13:40932034-41019314
ELF1 at chr13:40981983-41061440

International Knockout Mouse Consortium Genes Mapped to Human Genome

Elf1_44968 at chr13:40931919-41019372
Elf1_80634 at chr13:40931919-41019372
Elf1_VG19249 at chr13:40931919-41019372

BC030507 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 3485  100.0%         13     -  40932028  40982282  BC030507     1  3485  3499

Non-Human Aligned mRNA Search Results

MG132903 - Synthetic construct Xenopus tropicalis clone IMAGE:5382249 ELF1 homolog, elongation factor 1 (elof1) gene, encodes complete protein.
BC056225 - Mus musculus elongation factor 1 homolog (ELF1, S. cerevisiae), mRNA (cDNA clone MGC:62670 IMAGE:5150539), complete cds.
BC027532 - Mus musculus E74-like factor 1, mRNA (cDNA clone IMAGE:1430119), partial cds.
AB046531 - Rattus norvegicus mRNA for Ets-family transcription factor ELF1, complete cds.
AY971671 - Populus alba elongation factor elF1-alpha (EF1) mRNA, partial cds.
KC571850 - Coptotermes formosanus clone CFSNI412 transcription elongation factor elf1 like protein mRNA, complete cds.
EF093581 - Gadus morhua elongation factor 1 alpha (ELF1alpha) mRNA, partial cds.
BC057134 - Mus musculus E74-like factor 1, mRNA (cDNA clone MGC:73921 IMAGE:6853870), complete cds.
KX703003 - Hibiscus cannabinus cultivar P3A elongation factor 1-alpha (ELF1A) mRNA, partial cds.
KP238107 - Lablab purpureus translational elongation factor 1 subunit beta (elf1b) mRNA, partial cds.
AB533212 - Taenia taeniaeformis elf1 mRNA for elongation factor 1, partial cds.
MG135184 - Synthetic construct Xenopus tropicalis clone IMAGE:7695003 E74 like ETS transcription factor 1 (elf1) gene, encodes complete protein.
BC122943 - Xenopus tropicalis E74-like factor 1 (ets domain transcription factor), mRNA (cDNA clone MGC:145648 IMAGE:7695003), complete cds.
HQ890230 - Equus caballus clone 10_a08 ETS-related transcription factor elf-1-like protein (ELF1) mRNA, partial cds.
BC126517 - Bos taurus E74-like factor 1 (ets domain transcription factor), mRNA (cDNA clone MGC:139879 IMAGE:8284472), complete cds.
AF016040 - Mus musculus beta spectrin homolog (ELF1) mRNA, complete cds.
JU333294 - TSA: Macaca mulatta Mamu_519756 mRNA sequence.
JU474608 - TSA: Macaca mulatta Mamu_365878 mRNA sequence.
JV046388 - TSA: Macaca mulatta Mamu_422549 mRNA sequence.
BC024488 - Mus musculus elongation factor 1 homolog (ELF1, S. cerevisiae), mRNA (cDNA clone MGC:37411 IMAGE:4981209), complete cds.
BC019870 - Mus musculus elongation factor 1 homolog (ELF1, S. cerevisiae), mRNA (cDNA clone MGC:29916 IMAGE:5123727), complete cds.
DQ369853 - Stachybotrys elegans clone elf1sel translation elongation factor 1 alpha mRNA, partial cds.

Pfam Domains in UCSC Genes

Elf1 at chr19:11553048-11554344