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Gencode Genes

DET1 (ENST00000268148.12) at chr15:88512483-88546675 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 7, non-coding RNA. (from RefSeq NR_135740)
DET1 (ENST00000606927.1) at chr15:88501944-88505787 - DET1, COP1 ubiquitin ligase partner (from HGNC DET1)
DET1 (ENST00000564406.5) at chr15:88512483-88546653 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 8, non-coding RNA. (from RefSeq NR_135741)
DET1 (ENST00000559656.1) at chr15:88531868-88546337 - DET1, COP1 ubiquitin ligase partner (from HGNC DET1)
DET1 (ENST00000558413.1) at chr15:88530773-88546634 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0YN79)
DET1 (ENST00000557842.6) at chr15:88494440-88546645 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0YK09)
DET1 (ENST00000557837.1) at chr15:88512483-88546660 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 3, non-coding RNA. (from RefSeq NR_026645)
DET1 (ENST00000444300.1) at chr15:88512483-88536334 - Component of the E3 ubiquitin ligase DCX DET1-COP1  complex, which is required for ubiquitination and subsequent  degradation of target proteins. The complex is involved in JUN  ubiquitination and degradation. (from UniProt Q7L5Y6)
DDA1 (ENST00000596925.1) at chr19:17309574-17314732 - DET1 and DDB1 associated 1 (from HGNC DDA1)
DDA1 (ENST00000594501.1) at chr19:17315772-17319719 - DET1 and DDB1 associated 1 (from HGNC DDA1)
DDA1 (ENST00000359866.9) at chr19:17309563-17323298 - Homo sapiens DET1 and DDB1 associated 1 (DDA1), mRNA. (from RefSeq NM_024050)
DDA1 (ENST00000596582.1) at chr19:17309569-17320367 - May be involved in ubiquitination and subsequent  proteasomal degradation of target proteins. Component of the DDD-  E2 complexes which may provide a platform for interaction with  CUL4A and WD repeat proteins. (from UniProt Q9BW61)
DDA1 (ENST00000593466.5) at chr19:17309518-17320492 - May be involved in ubiquitination and subsequent  proteasomal degradation of target proteins. Component of the DDD-  E2 complexes which may provide a platform for interaction with  CUL4A and WD repeat proteins. (from UniProt Q9BW61)
COP1 (ENST00000474194.1) at chr1:176135010-176207083 - E3 ubiquitin-protein ligase that mediates ubiquitination  and subsequent proteasomal degradation of target proteins. E3  ubiquitin ligases accept ubiquitin from an E2 ubiquitin-  conjugating enzyme in the form of a thioester and then directly  transfers the ubiquitin to targeted substrates. Involved in JUN  ubiquitination and degradation. Directly involved in p53 (TP53)  ubiquitination and degradation, thereby abolishing p53-dependent  transcription and apoptosis. Ubiquitinates p53 independently of  MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by  functioning as the essential RING domain subunit of larger E3  complexes. In contrast, it does not constitute the catalytic RING  subunit in the DCX DET1-COP1 complex that negatively regulates  JUN, the ubiquitin ligase activity being mediated by RBX1.  Involved in 14-3-3 protein sigma/SFN ubiquitination and  proteasomal degradation, leading to AKT activation and promotion  of cell survival. (from UniProt Q8NHY2)
COP1 (ENST00000308769.12) at chr1:175945153-176206978 - Homo sapiens COP1 E3 ubiquitin ligase (COP1), transcript variant 2, mRNA. (from RefSeq NM_001001740)
COP1 (ENST00000367669.8) at chr1:175944831-176207286 - Homo sapiens COP1 E3 ubiquitin ligase (COP1), transcript variant 1, mRNA. (from RefSeq NM_022457)
CUL4A (ENST00000451881.5) at chr13:113208772-113265077 - Homo sapiens cullin 4A (CUL4A), transcript variant 2, mRNA. (from RefSeq NM_003589)
CUL4A (ENST00000375441.7) at chr13:113208193-113265072 - Homo sapiens cullin 4A (CUL4A), transcript variant 3, mRNA. (from RefSeq NM_001278513)
CUL4A (ENST00000375440.9) at chr13:113209613-113267108 - Homo sapiens cullin 4A (CUL4A), transcript variant 1, mRNA. (from RefSeq NM_001008895)
CUL4A (ENST00000617546.4) at chr13:113208836-113267108 - Homo sapiens cullin 4A (CUL4A), transcript variant 9, mRNA. (from RefSeq NM_001354942)
RBX1 (ENST00000216225.9) at chr22:40951378-40973309 - Homo sapiens ring-box 1 (RBX1), mRNA. (from RefSeq NM_014248)
DDB1 (ENST00000301764.11) at chr11:61299451-61333366 - Homo sapiens damage specific DNA binding protein 1 (DDB1), mRNA. (from RefSeq NM_001923)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NR_135742.1 at chr15:88501924-88546703
NR_135739.1 at chr15:88511552-88546703
NR_135743.1 at chr15:88512480-88546375
NM_001321596.1 at chr15:88512480-88546375
NR_135744.1 at chr15:88512480-88546375
NM_017996.4 at chr15:88512480-88546703
NM_001321594.1 at chr15:88512480-88546703
NR_135741.1 at chr15:88512480-88546703
NM_001144074.2 at chr15:88512480-88546703
NR_026645.2 at chr15:88512480-88546703
NR_135740.1 at chr15:88512480-88546703

RefSeq Genes

DET1 at chr15:88512481-88546375 - (NR_135743) 
DET1 at chr15:88512481-88546703 - (NR_135741) 
DET1 at chr15:88512481-88546703 - (NR_135740) 
DET1 at chr15:88512481-88546375 - (NR_135744) 
DET1 at chr15:88501922-88546681 - (NR_135742) 
DET1 at chr15:88512481-88546703 - (NR_026645) 
DET1 at chr15:88511555-88546703 - (NR_135739) 
DET1 at chr15:88512481-88546703 - (NM_001321594) DET1 homolog isoform 3
DET1 at chr15:88512481-88546703 - (NM_001144074) DET1 homolog isoform 2
DET1 at chr15:88512481-88546703 - (NM_017996) DET1 homolog isoform 1
DET1 at chr15:88512481-88546375 - (NM_001321596) DET1 homolog isoform 2
DDA1 at chr19:17309563-17323297 - (NM_024050) DET1- and DDB1-associated protein 1

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

DET1, COP1 ubiquitin ligase partner, transcript variant 11 at chr15:88512480-88546375 - (NR_135744.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 9 at chr15:88501924-88546703 - (NR_135742.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 7 at chr15:88512480-88546703 - (NR_135740.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 3 at chr15:88512480-88546703 - (NR_026645.2)
DET1, COP1 ubiquitin ligase partner, transcript variant 1 at chr15:88512480-88546703 - (NM_017996.4)
DET1, COP1 ubiquitin ligase partner, transcript variant 4 at chr15:88512480-88546703 - (NM_001321594.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 2 at chr15:88512480-88546703 - (NM_001144074.2)
DET1, COP1 ubiquitin ligase partner, transcript variant 5 at chr15:88512480-88546375 - (NM_001321596.1)
DET1 and DDB1 associated 1 at chr19:17309528-17323298 - (NM_024050.5)
DET1, COP1 ubiquitin ligase partner, transcript variant 6 at chr15:88511552-88546703 - (NR_135739.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 8 at chr15:88512480-88546703 - (NR_135741.1)
DET1, COP1 ubiquitin ligase partner, transcript variant 10 at chr15:88512480-88546375 - (NR_135743.1)

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

DET1 and DDB1 associated 1, transcript variant X1 at chr19:17309574-17323301 - (XM_024451701.1)

Non-Human RefSeq Genes

det1 at chr15:88512951-88531687 - (NM_199670) DET1 homolog
DET1 at chr15:88512490-88546586 - (NM_001099117) DET1 homolog
DET1 at chr15:88512502-88546568 - (NM_001261519) DET1 homolog
Det1 at chr15:88512490-88546590 - (NM_029585) DET1 homolog
Dda1 at chr19:17314023-17323276 - (NM_025600) DET1- and DDB1-associated protein 1 isoform 1
Dda1 at chr19:17314337-17323276 - (NM_001294259) DET1- and DDB1-associated protein 1 isoform 3
Dda1 at chr19:17314023-17323276 - (NM_001294258) DET1- and DDB1-associated protein 1 isoform 2
DDA1 at chr19:17309546-17320292 - (NM_001015583) DET1- and DDB1-associated protein 1
DDA1 at chr19:17314022-17323308 - (NM_001131649) DET1- and DDB1-associated protein 1
det1.L at chr15:88512951-88531687 - (NM_001092564) DET1, COP1 ubiquitin ligase partner L homeolog
Det1 at chr15:88516749-88546593 - (NM_001037194) DET1 homolog
Dda1 at chr19:17314022-17323307 - (NM_001134790) DET1- and DDB1-associated protein 1
dda1 at chr19:17314023-17319656 - (NM_001201294) DET1- and DDB1-associated protein 1
det1 at chr15:88512951-88531687 - (NM_001173861) DET1 homolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

DET1 at chr15:88494440-88546645
DET1 at chr15:88501944-88505787
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

DET1 at chr15:88511559-88546645
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

DET1 at chr15:88511559-88546645
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

DET1 at chr15:88511559-88546645
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

DET1 at chr15:88511559-88546645
DET1 at chr15:88512483-88536334
DET1 at chr15:88512483-88546653
DET1 at chr15:88512483-88546660
DET1 at chr15:88512483-88546675
DET1 at chr15:88530773-88546634
DET1 at chr15:88531868-88546337

International Knockout Mouse Consortium Genes Mapped to Human Genome

Det1_31520 at chr15:88512483-88546681

Human Aligned mRNA Search Results

BC001242 - Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone IMAGE:3451902), partial cds.
BC109060 - Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:126156 IMAGE:40033727), complete cds.
BC109061 - Homo sapiens de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:126157 IMAGE:40033728), complete cds.
BC000615 - Homo sapiens DET1 and DDB1 associated 1, mRNA (cDNA clone MGC:2594 IMAGE:3346055), complete cds.
AK054603 - Homo sapiens cDNA FLJ30041 fis, clone 3NB692001528, highly similar to DET1 homolog.
AK000965 - Homo sapiens cDNA FLJ10103 fis, clone HEMBA1002495, weakly similar to LIGHT-MEDIATED DEVELOPMENT PROTEIN DET1.

Human Unaligned mRNA Search Results

NR_135743 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 10, non-coding RNA.
NR_135741 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 8, non-coding RNA.
NR_135740 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 7, non-coding RNA.
NR_135744 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 11, non-coding RNA.
NR_135742 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 9, non-coding RNA.
NR_026645 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 3, non-coding RNA.
NR_135739 - Homo sapiens DET1 partner of COP1 E3 ubiquitin ligase (DET1), transcript variant 6, non-coding RNA.

Non-Human Aligned mRNA Search Results

BT059680 - Salmo salar clone ssal-rgf-523-294 DET1 homolog putative mRNA, complete cds.
BC164661 - Danio rerio de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:191836 IMAGE:100060145), complete cds.
GU589398 - Ictalurus punctatus clone CBFA21647 det1- and ddb1-associated protein 1 (DDA1) mRNA, complete cds.
JU320193 - TSA: Macaca mulatta Mamu_509284 mRNA sequence.
JV043786 - TSA: Macaca mulatta Mamu_408788 mRNA sequence.
JV635706 - TSA: Macaca mulatta Mamu_470444 mRNA sequence.
JU174355 - TSA: Crotalus adamanteus Cadam_DET1, mRNA sequence.
JP286463 - TSA: Pipa carvalhoi Pipa_carvalhoi.contig503 mRNA sequence.
JW872007 - TSA: Callorhinchus milii te.comp17683_c0_seq1 mRNA sequence.
BC142507 - Bos taurus de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:148385 IMAGE:8184481), complete cds.
BC120366 - Bos taurus DET1 and DDB1 associated 1, mRNA (cDNA clone MGC:143143 IMAGE:8222108), complete cds.
JP008437 - TSA: Mustela putorius furo MPF81003641contig1/1 mRNA sequence.
JU320350 - TSA: Macaca mulatta Mamu_512981 mRNA sequence.
JV048215 - TSA: Macaca mulatta Mamu_408005 mRNA sequence.
AY246761 - Equus caballus DET1 mRNA, partial cds.
JT405351 - TSA: Ictalurus punctatus clc_263243 mRNA sequence.
BC031930 - Mus musculus de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:19287 IMAGE:4018106), complete cds.
BC100253 - Rattus norvegicus de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:116189 IMAGE:7456473), complete cds.
BC055677 - Danio rerio de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:66486 IMAGE:2601424), complete cds.
BC076520 - Danio rerio de-etiolated homolog 1 (Arabidopsis), mRNA (cDNA clone MGC:91946 IMAGE:7041005), complete cds.
BC093523 - Mus musculus DET1 and DDB1 associated 1, mRNA (cDNA clone MGC:103301 IMAGE:3711509), complete cds.
BC034701 - Mus musculus DET1 and DDB1 associated 1, mRNA (cDNA clone MGC:27873 IMAGE:3494430), complete cds.

Pfam Domains in UCSC Genes

Det1 at chr15:88512963-88531282