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Gencode Genes

DAZ1 (ENST00000405239.5) at chrY:23129355-23199094 - Homo sapiens deleted in azoospermia 1 (DAZ1), mRNA. (from RefSeq NM_004081)
DAZ1 (ENST00000620725.1) at chrY:23131004-23198987 - deleted in azoospermia 1 (from HGNC DAZ1)
DAZ1 (ENST00000540248.5) at chrY:23129362-23199010 - deleted in azoospermia 1 (from HGNC DAZ1)
DAZ1 (ENST00000466332.1) at chrY:23129363-23140812 - deleted in azoospermia 1 (from HGNC DAZ1)
DAZ1 (ENST00000426000.6) at chrY:23130710-23199008 - deleted in azoospermia 1 (from HGNC DAZ1)
DAZ1 (ENST00000382510.8) at chrY:23129863-23198923 - RNA-binding protein that plays an essential role in  spermatogenesis. May act by binding to the 3'-UTR of mRNAs and  regulating their translation. Promotes germ-cell progression to  meiosis and formation of haploid germ cells. (from UniProt Q9NQZ3)
BOLL (ENST00000433157.1) at chr2:197728534-197785010 - Probable RNA-binding protein, which may be required  during spermatogenesis. May act by binding to the 3'-UTR of mRNAs  and regulating their translation (By similarity). (from UniProt Q8N9W6)
BOLL (ENST00000392296.8) at chr2:197726879-197785350 - Homo sapiens boule homolog, RNA binding protein (BOLL), transcript variant 2, mRNA. (from RefSeq NM_033030)
BOLL (ENST00000282278.12) at chr2:197726879-197786312 - Homo sapiens boule homolog, RNA binding protein (BOLL), transcript variant 3, mRNA. (from RefSeq NM_001284358)
BOLL (ENST00000321801.11) at chr2:197726879-197786574 - Homo sapiens boule homolog, RNA binding protein (BOLL), transcript variant 1, mRNA. (from RefSeq NM_197970)
PUM2 (ENST00000403432.5) at chr2:20251310-20350702 - Sequence-specific RNA-binding protein that regulates  translation and mRNA stability by binding the 3'-UTR of mRNA  targets. Its interactions and tissue specificity suggest that it  may be required to support proliferation and self-renewal of stem  cells by regulating the translation of key transcripts. (from UniProt Q8TB72)
PUM2 (ENST00000338086.9) at chr2:20248691-20327383 - Homo sapiens pumilio RNA binding family member 2 (PUM2), transcript variant 1, mRNA. (from RefSeq NM_015317)
PUM2 (ENST00000361078.6) at chr2:20248692-20350850 - Homo sapiens pumilio RNA binding family member 2 (PUM2), transcript variant 15, mRNA. (from RefSeq NM_001352930)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_004081.5 at chrY:23129355-23199092

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011531483.1 at chrY:23129355-23181292
XM_011531482.2 at chrY:23129355-23199117

RefSeq Genes

DAZ1 at chrY:23129355-23199092 - (NM_004081) deleted in azoospermia protein 1

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

DAZ1 at chrY:23129355-23199094
DAZ1 at chrY:23129362-23199010
DAZ1 at chrY:23129363-23140812
DAZ1 at chrY:23129863-23198923
DAZ1 at chrY:23130710-23199008
DAZ1 at chrY:23131004-23198987

BC114927 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2382  100.0%          Y     -  23129863  23198923  BC114927     1  2382  2382

JQ975875 Alignments in Non-Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1270   91.3%          Y     ++  24833963  24905583  JQ975875    30  1310  1319
 1142   91.6%          Y     +-  24764533  24813349  JQ975875    30  1304  1319
 1117   91.5%          Y     +-  23130855  23198964  JQ975875    30  1265  1319
 1031   92.1%          Y     ++  23219577  23289758  JQ975875    30  1169  1319