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UCSC Genes

CTNND2 (uc003jfa.1) at chr5:10971952-11904110 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
CTNND2 (uc011cmz.1) at chr5:10971952-11904110 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
CTNND2 (uc011cmy.1) at chr5:10971952-11588960 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
CTNND2 (uc011cmx.1) at chr5:10971952-11385341 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
CTNND2 (uc010itu.1) at chr5:10971952-11904110 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
CTNND2 (uc010itt.2) at chr5:10971952-11588960 - Homo sapiens catenin (cadherin-associated protein), delta 2 (CTNND2), mRNA.
LRRC7 (uc001dep.3) at chr1:70225858-70589171 - Homo sapiens leucine rich repeat containing 7 (LRRC7), mRNA.
PKP4 (uc002uac.3) at chr2:159518754-159537940 - Homo sapiens plakophilin 4 (PKP4), transcript variant 1, mRNA.
PKP4 (uc002tzw.3) at chr2:159313476-159537940 - Homo sapiens plakophilin 4 (PKP4), transcript variant 2, mRNA.
PKP4 (uc002uaa.3) at chr2:159433783-159537940 - Homo sapiens plakophilin 4 (PKP4), transcript variant 2, mRNA.
PKP4 (uc002tzv.3) at chr2:159313476-159537940 - Homo sapiens plakophilin 4 (PKP4), transcript variant 1, mRNA.
PKP4 (uc002tzz.1) at chr2:159389692-159514826 - Homo sapiens plakophilin 4 (PKP4), transcript variant 2, mRNA.
PKP4 (uc002tzu.3) at chr2:159313476-159523172 - Homo sapiens plakophilin 4 (PKP4), transcript variant 2, mRNA.
DACT2 (uc003qwq.3) at chr6:168707584-168720402 - Homo sapiens dishevelled-binding antagonist of beta-catenin 2 (DACT2), mRNA.
ZBTB33 (uc004esn.1) at chrX:119384607-119392251 - Homo sapiens zinc finger and BTB domain containing 33 (ZBTB33), transcript variant 2, mRNA.
ZBTB33 (uc010nqm.1) at chrX:119384607-119392251 - Homo sapiens zinc finger and BTB domain containing 33 (ZBTB33), transcript variant 1, mRNA.
ZBTB33 (uc022cdm.1) at chrX:119387271-119389289 - Homo sapiens zinc finger and BTB domain containing 33 (ZBTB33), transcript variant 2, mRNA.
FRMPD2 (uc001jgi.3) at chr10:49364601-49482941 - Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 3, mRNA.
FRMPD2 (uc001jgj.3) at chr10:49364601-49482941 - Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 3, mRNA.
ARHGEF28 (uc011csq.2) at chr5:72921983-73237818 - Homo sapiens Rho guanine nucleotide exchange factor (GEF) 28 (ARHGEF28), transcript variant 2, mRNA.
PDZD2 (uc003jhm.3) at chr5:31798996-32111038 - Homo sapiens PDZ domain containing 2 (PDZD2), mRNA.
PDZD2 (uc003jhl.3) at chr5:31639517-32111038 - Homo sapiens PDZ domain containing 2 (PDZD2), mRNA.
MAGI2 (uc003ugx.3) at chr7:77646374-79082890 - Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 2 (MAGI2), mRNA.
PSEN1 (uc001xnr.3) at chr14:73603143-73690399 - Homo sapiens presenilin 1 (PSEN1), transcript variant 1, mRNA.
CDK5 (uc003wir.2) at chr7:150750899-150755052 - Homo sapiens cyclin-dependent kinase 5 (CDK5), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001288715.1 at chr5:10971952-11589029
NM_001288716.1 at chr5:10971952-11589029
NM_001332.3 at chr5:10971952-11904155
NM_001288717.1 at chr5:10971952-11904155
NR_109988.1 at chr5:10971952-11904155

RefSeq Genes

CTNND2 at chr5:10971954-11589029 - (NM_001288715) catenin delta-2 isoform 2
CTNND2 at chr5:10971954-11589029 - (NM_001288716) catenin delta-2 isoform 3
CTNND2 at chr5:10971969-11589178 - (NM_001364128) catenin delta-2 isoform 6
CTNND2 at chr5:10971949-11904558 - (NM_001288717) catenin delta-2 isoform 4
CTNND2 at chr5:10971949-11904558 - (NM_001332) catenin delta-2 isoform 1
CTNND2 at chr5:10971949-11904558 - (NR_109988) 

Non-Human RefSeq Genes

Ctnnd2 at chr5:10972639-11732379 - (NM_001271502) catenin delta-2
Ctnnd2 at chr5:10971966-11904565 - (NM_008729) catenin delta-2 isoform 1
Ctnnd2 at chr5:10971966-11904565 - (NM_001355502) catenin delta-2 isoform 2
ctnnd2b at chr5:10973562-11732379 - (NM_001365616) catenin delta-2 isoform 3
ctnnd2b at chr5:10973562-11732379 - (NM_001193651) catenin delta-2 isoform 2
ctnnd2b at chr5:10973562-11732379 - (NM_001365615) catenin delta-2 isoform 1
ctnnd2b at chr5:10973562-11732379 - (NM_001365617) catenin delta-2 isoform 4

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CTNND2 at chr5:10971948-11904558
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CTNND2 at chr5:10971948-11904558
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from GENCODE Version 19

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from GENCODE Version 19

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973236-11588900
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

CTNND2 at chr5:10971952-11904155
CTNND2 at chr5:10971978-11904110
CTNND2 at chr5:10972644-11384883
CTNND2 at chr5:10972993-11904092
CTNND2 at chr5:10973007-11589131
CTNND2 at chr5:10973045-11117604
CTNND2 at chr5:10973236-11588900
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973301-11904155
CTNND2 at chr5:10973452-11588960
CTNND2 at chr5:10973699-11018172
CTNND2 at chr5:11346540-11588960
CTNND2 at chr5:11346704-11903354
CTNND2 at chr5:11346707-11385024
CTNND2 at chr5:11364710-11385049
CTNND2 at chr5:11364969-11903304
CTNND2 at chr5:11385094-11386123
CTNND2 at chr5:11385137-11588923
CTNND2 at chr5:11397205-11903497
CTNND2 at chr5:11508483-11904091

International Knockout Mouse Consortium Genes Mapped to Human Genome

Ctnnd2_71896 at chr5:10971952-11904110
Ctnnd2_VG11552 at chr5:10971952-11904110

U52351 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 4242   99.9%          5     -  10971956  11384908    U52351     1  4243  4243

Non-Human Aligned mRNA Search Results

BC138260 - Mus musculus catenin (cadherin associated protein), delta 2, mRNA (cDNA clone MGC:169884 IMAGE:8861279), complete cds.
BC138261 - Mus musculus catenin (cadherin associated protein), delta 2, mRNA (cDNA clone MGC:169885 IMAGE:8861280), complete cds.
BC145217 - Mus musculus catenin (cadherin associated protein), delta 2, mRNA (cDNA clone MGC:178776 IMAGE:9053768), complete cds.
JU324187 - TSA: Macaca mulatta Mamu_508012 mRNA sequence.
JU327610 - TSA: Macaca mulatta Mamu_511321 mRNA sequence.
JU327611 - TSA: Macaca mulatta Mamu_511322 mRNA sequence.
BC129369 - Danio rerio novel protein similar to vertebrate catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) (CTNND2), mRNA (cDNA clone IMAGE:7270697), partial cds.

Ensembl Genes

CTNND2 at chr5:11397205-11903497 - (ENST00000508761)
CTNND2 at chr5:11385094-11386123 - (ENST00000514132)
CTNND2 at chr5:11364710-11385049 - (ENST00000507430)
CTNND2 at chr5:11346704-11903354 - (ENST00000502551)
CTNND2 at chr5:10973699-11018172 - (ENST00000506324)
CTNND2 at chr5:10973301-11904155 - (ENST00000504499)
CTNND2 at chr5:10973007-11589131 - (ENST00000511377)
CTNND2 at chr5:10972644-11384883 - (ENST00000495388)
CTNND2 at chr5:10971952-11904155 - (ENST00000304623)
CTNND2 at chr5:10971978-11904110 - (ENST00000359640)
CTNND2 at chr5:10972993-11904092 - (ENST00000513588)
CTNND2 at chr5:10973301-11904155 - (ENST00000458100)
CTNND2 at chr5:10973452-11588960 - (ENST00000503622)
CTNND2 at chr5:11346540-11588960 - (ENST00000504354)
CTNND2 at chr5:11346707-11385024 - (ENST00000506735)
CTNND2 at chr5:11364969-11903304 - (ENST00000511278)
CTNND2 at chr5:11385137-11588923 - (ENST00000513598)
CTNND2 at chr5:11508483-11904091 - (ENST00000509868)

Vega Protein-Coding Annotations

OTTHUMT00000206999 at chr5:10971952-11904155
OTTHUMT00000365973 at chr5:10972644-11384883
OTTHUMT00000365968 at chr5:10972993-11904092
OTTHUMT00000365971 at chr5:10973007-11589131
OTTHUMT00000365969 at chr5:10973301-11904155
OTTHUMT00000365970 at chr5:10973452-11588960
OTTHUMT00000365995 at chr5:10973699-11018172
OTTHUMT00000365977 at chr5:11346540-11588960
OTTHUMT00000365975 at chr5:11346704-11903354
OTTHUMT00000365994 at chr5:11346707-11385024
OTTHUMT00000365993 at chr5:11364710-11385049
OTTHUMT00000365976 at chr5:11364969-11903304
OTTHUMT00000365992 at chr5:11385094-11386123
OTTHUMT00000365990 at chr5:11385137-11588923
OTTHUMT00000365974 at chr5:11397205-11903497
OTTHUMT00000365991 at chr5:11508483-11904091