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UCSC Genes

CLUH (uc002fuy.1) at chr17:2592680-2614927 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog (CLUH), nuclear gene encoding mitochondrial protein, mRNA.
CLUH (uc010ckc.1) at chr17:2592684-2598395 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog (CLUH), nuclear gene encoding mitochondrial protein, mRNA.
CLUH (uc002fux.1) at chr17:2592680-2606793 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog (CLUH), nuclear gene encoding mitochondrial protein, mRNA.
CLUHP3 (uc002eck.4) at chr16:31711934-31718745 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog pseudogene 3 (CLUHP3), non-coding RNA.
CLUHP3 (uc002ecm.4) at chr16:31711934-31718745 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog pseudogene 3 (CLUHP3), non-coding RNA.
CLUHP3 (uc002ecl.4) at chr16:31711934-31718745 - Homo sapiens clustered mitochondria (cluA/CLU1) homolog pseudogene 3 (CLUHP3), non-coding RNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_015229.3 at chr17:2592680-2614927
NR_024034.1 at chr16:31711934-31718758

RefSeq Genes

CLUH at chr17:2592681-2615058 - (NM_015229) clustered mitochondria protein homolog isoform 2
CLUH at chr17:2592681-2615058 - (NM_001366661) clustered mitochondria protein homolog isoform 1
CLUH at chr17:2592681-2615314 - (NM_001366662) clustered mitochondria protein homolog isoform 3
CLUHP3 at chr16:31711934-31718745 - (NR_024034) 

Non-Human RefSeq Genes

Cluh at chr17:2592682-2615034 - (NM_001305213) clustered mitochondria protein homolog
cluh at chr17:2594011-2607733 - (NM_001079109) clustered mitochondria protein homolog
Cluh at chr17:2592676-2615049 - (NM_001368711) clustered mitochondria protein homolog isoform 2
Cluh at chr17:2592676-2615049 - (NM_001081158) clustered mitochondria protein homolog isoform 1
cluha at chr17:2594029-2607733 - (NM_001077560) clustered mitochondria protein homolog

Basic Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615089
CLUH at chr17:2592680-2615314
CLUH at chr17:2592682-2615058

Comprehensive Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615089
CLUH at chr17:2592680-2615314
CLUH at chr17:2592682-2615058
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615089
CLUH at chr17:2592680-2615314
CLUH at chr17:2592682-2615058

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615089
CLUH at chr17:2592680-2615314
CLUH at chr17:2592682-2615058
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2594903-2615089
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2594903-2615089
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2594903-2615089
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from GENCODE Version 19

CLUH at chr17:2592680-2607844
CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314

Comprehensive Gene Annotation Set from GENCODE Version 19

CLUH at chr17:2592680-2607844
CLUH at chr17:2592680-2614927
CLUH at chr17:2592680-2615314
CLUH at chr17:2592683-2607665
CLUH at chr17:2594847-2598243
CLUH at chr17:2594903-2615089
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

CLUH at chr17:2592680-2607844
CLUH at chr17:2592680-2614927
CLUH at chr17:2592682-2615314
CLUH at chr17:2592683-2606793

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

CLUH at chr17:2592680-2607844
CLUH at chr17:2592680-2614927
CLUH at chr17:2592682-2615314
CLUH at chr17:2592683-2606793
CLUH at chr17:2594847-2598243
CLUH at chr17:2594903-2615089
CLUH at chr17:2595601-2597448
CLUH at chr17:2597812-2598897
CLUH at chr17:2598320-2598993
CLUH at chr17:2598999-2599767
CLUH at chr17:2601842-2604772
CLUH at chr17:2604408-2604744
CLUH at chr17:2605219-2615086
CLUH at chr17:2605287-2615058
CLUH at chr17:2606700-2614492
CLUH at chr17:2606753-2615957

Retroposed Genes V5, Including Pseudogenes

CLUH at chr18:29775758-29776930 - (NM_015229.3-9)
CLUH at chr18:29775758-29776930 - (NM_015229.3-9)

JT415084 Alignments in Non-Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 3477   77.4%         17     +-   2594017   2607733  JT415084   591  4478  5512

Ensembl Genes

CLUHP1 at chrY:19733139-19737712 - (ENST00000435012)
CLUH at chr17:2606753-2615957 - (ENST00000571566)
CLUH at chr17:2605219-2615086 - (ENST00000576885)
CLUH at chr17:2601842-2604772 - (ENST00000572129)
CLUH at chr17:2598320-2598993 - (ENST00000573641)
CLUH at chr17:2595601-2597448 - (ENST00000572014)
CLUH at chr17:2594847-2598243 - (ENST00000574210)
CLUH at chr17:2592680-2615314 - (ENST00000570628)
CLUH at chr17:2592680-2607844 - (ENST00000538975)
CLUHP3 at chr16:31716991-31718672 - (ENST00000431761)
CLUHP3 at chr16:31714489-31719902 - (ENST00000563678)
CLUHP3 at chr16:31711916-31718743 - (ENST00000525610)
CLUHP5 at chr10:135470739-135474139 - (ENST00000438421)
CLUHP3 at chr16:31711911-31718758 - (ENST00000254109)
CLUHP3 at chr16:31711956-31718758 - (ENST00000532304)
CLUHP3 at chr16:31715601-31717339 - (ENST00000411844)
CLUHP3 at chr16:31718284-31721097 - (ENST00000562354)
CLUH at chr17:2592680-2614927 - (ENST00000435359)
CLUH at chr17:2592683-2607665 - (ENST00000575014)
CLUH at chr17:2594903-2615089 - (ENST00000574426)
CLUH at chr17:2597812-2598897 - (ENST00000574166)
CLUH at chr17:2598999-2599767 - (ENST00000575624)
CLUH at chr17:2604408-2604744 - (ENST00000571539)
CLUH at chr17:2606700-2614492 - (ENST00000576309)
CLUHP4 at chr4:190979057-190984160 - (ENST00000507604)
CLUHP2 at chrY:20442064-20446647 - (ENST00000426660)