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Gencode Genes

CLTC (ENST00000269122.8) at chr17:59619895-59696956 - Homo sapiens clathrin heavy chain (CLTC), transcript variant 1, mRNA. (from RefSeq NM_004859)
CLTC (ENST00000621829.4) at chr17:59619689-59696956 - Homo sapiens clathrin heavy chain (CLTC), transcript variant 2, mRNA. (from RefSeq NM_001288653)
CLTC (ENST00000585198.1) at chr17:59647646-59648695 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000584313.5) at chr17:59619943-59651316 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3QL20)
CLTC (ENST00000580081.1) at chr17:59619924-59647502 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KSQ2)
CLTC (ENST00000579815.1) at chr17:59670982-59677141 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000579456.5) at chr17:59619932-59694114 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KS13)
CLTC (ENST00000498711.1) at chr17:59689156-59695112 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000496076.1) at chr17:59683714-59684509 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000483176.2) at chr17:59655961-59663992 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KTN1)
CLTC (ENST00000475458.1) at chr17:59685117-59687147 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KRF5)
CLTC (ENST00000472651.5) at chr17:59683906-59693822 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000472129.3) at chr17:59648240-59656231 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000466513.1) at chr17:59664690-59667066 - clathrin heavy chain (from HGNC CLTC)
CLTC (ENST00000393043.5) at chr17:59619858-59690826 - Clathrin is the major protein of the polyhedral coat of  coated pits and vesicles. Two different adapter protein complexes  link the clathrin lattice either to the plasma membrane or to the  trans-Golgi network. (from UniProt Q00610)
ACAP1 (ENST00000158762.8) at chr17:7336529-7351477 - Homo sapiens ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 (ACAP1), mRNA. (from RefSeq NM_014716)
FCHO1 (ENST00000596536.5) at chr19:17751477-17788557 - Homo sapiens FCH domain only 1 (FCHO1), transcript variant 2, mRNA. (from RefSeq NM_015122)
FCHO1 (ENST00000595033.5) at chr19:17751506-17788453 - Homo sapiens FCH domain only 1 (FCHO1), transcript variant 4, mRNA. (from RefSeq NM_001161359)
FCHO1 (ENST00000600676.5) at chr19:17747745-17788568 - Homo sapiens FCH domain only 1 (FCHO1), transcript variant 3, mRNA. (from RefSeq NM_001161358)
FCHO1 (ENST00000252771.11) at chr19:17747718-17788568 - Functions in an early step of clathrin-mediated  endocytosis. Has both a membrane binding/bending activity and the  ability to recruit proteins essential to the formation of  functional clathrin-coated pits. May regulate Bmp signaling by  regulating clathrin-mediated endocytosis of Bmp receptors (By  similarity). (from UniProt O14526)
FCHO1 (ENST00000596951.5) at chr19:17754676-17788562 - Functions in an early step of clathrin-mediated  endocytosis. Has both a membrane binding/bending activity and the  ability to recruit proteins essential to the formation of  functional clathrin-coated pits. May regulate Bmp signaling by  regulating clathrin-mediated endocytosis of Bmp receptors (By  similarity). (from UniProt O14526)
DNAJC6 (ENST00000263441.11) at chr1:65264694-65415869 - Homo sapiens DnaJ heat shock protein family (Hsp40) member C6 (DNAJC6), transcript variant 3, mRNA. (from RefSeq NM_001256865)
DENND1C (ENST00000543576.5) at chr19:6467498-6481787 - Homo sapiens DENN domain containing 1C (DENND1C), transcript variant 2, mRNA. (from RefSeq NM_001290331)
DNAJC6 (ENST00000395325.7) at chr1:65264754-65415869 - Homo sapiens DnaJ heat shock protein family (Hsp40) member C6 (DNAJC6), transcript variant 2, mRNA. (from RefSeq NM_014787)
DENND1C (ENST00000381480.7) at chr19:6467207-6481787 - Homo sapiens DENN domain containing 1C (DENND1C), transcript variant 1, mRNA. (from RefSeq NM_024898)
DNAJC6 (ENST00000371069.5) at chr1:65309543-65415871 - Homo sapiens DnaJ heat shock protein family (Hsp40) member C6 (DNAJC6), transcript variant 1, mRNA. (from RefSeq NM_001256864)
DENND1B (ENST00000367396.7) at chr1:197552255-197775325 - Homo sapiens DENN domain containing 1B (DENND1B), transcript variant 2, mRNA. (from RefSeq NM_144977)
DENND1B (ENST00000620048.6) at chr1:197504748-197775480 - Homo sapiens DENN domain containing 1B (DENND1B), transcript variant 3, mRNA. (from RefSeq NM_001195215)
DENND1B (ENST00000235453.8) at chr1:197552255-197775192 - Homo sapiens DENN domain containing 1B (DENND1B), transcript variant 5, mRNA. (from RefSeq NM_001300858)
ALK (ENST00000642122.1) at chr2:29192774-29223900 - Homo sapiens ALK receptor tyrosine kinase (ALK), transcript variant 2, mRNA. (from RefSeq NM_001353765)
ALK (ENST00000389048.8) at chr2:29192774-29921586 - Homo sapiens ALK receptor tyrosine kinase (ALK), transcript variant 1, mRNA. (from RefSeq NM_004304)
BIN1 (ENST00000348750.8) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 10, mRNA. (from RefSeq NM_139351)
BIN1 (ENST00000409400.1) at chr2:127048038-127107278 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 9, mRNA. (from RefSeq NM_139350)
BIN1 (ENST00000393041.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 7, mRNA. (from RefSeq NM_139349)
BIN1 (ENST00000393040.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 6, mRNA. (from RefSeq NM_139348)
BIN1 (ENST00000376113.6) at chr2:127048027-127107001 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 13, mRNA. (from RefSeq NM_001320632)
BIN1 (ENST00000357970.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 2, mRNA. (from RefSeq NM_139344)
BIN1 (ENST00000352848.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 8, mRNA. (from RefSeq NM_004305)
BIN1 (ENST00000351659.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 3, mRNA. (from RefSeq NM_139345)
BIN1 (ENST00000346226.7) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 5, mRNA. (from RefSeq NM_139347)
BIN1 (ENST00000259238.8) at chr2:127048027-127107288 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 4, mRNA. (from RefSeq NM_139346)
BIN1 (ENST00000316724.10) at chr2:127048032-127107154 - Homo sapiens bridging integrator 1 (BIN1), transcript variant 1, mRNA. (from RefSeq NM_139343)
HERC1 (ENST00000443617.7) at chr15:63608618-63833948 - Homo sapiens HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 (HERC1), mRNA. (from RefSeq NM_003922)
HIP1 (ENST00000434438.6) at chr7:75534088-75738941 - Homo sapiens huntingtin interacting protein 1 (HIP1), transcript variant 2, mRNA. (from RefSeq NM_001243198)
HIP1 (ENST00000336926.11) at chr7:75533298-75738941 - Homo sapiens huntingtin interacting protein 1 (HIP1), transcript variant 1, mRNA. (from RefSeq NM_005338)
HIP1 (ENST00000616821.4) at chr7:75538083-75611702 - Plays a role in clathrin-mediated endocytosis and  trafficking. Involved in regulating AMPA receptor trafficking in  the central nervous system in an NMDA-dependent manner. Enhances  androgen receptor (AR)-mediated transcription. May act as a  proapoptotic protein that induces cell death by acting through the  intrinsic apoptosis pathway. Binds 3-phosphoinositides (via ENTH  domain). May act through the ENTH domain to promote cell survival  by stabilizing receptor tyrosine kinases following ligand-induced  endocytosis. May play a functional role in the cell filament  networks. May be required for differentiation, proliferation,  and/or survival of somatic and germline progenitors. (from UniProt O00291)
SRC (ENST00000373567.6) at chr20:37383668-37406050 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)
SRC (ENST00000373558.2) at chr20:37384150-37406050 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)
SRC (ENST00000358208.8) at chr20:37382604-37405432 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)
ERBB2 (ENST00000406381.6) at chr17:39694931-39728662 - Protein tyrosine kinase that is part of several cell  surface receptor complexes, but that apparently needs a coreceptor  for ligand binding. Essential component of a neuregulin-receptor  complex, although neuregulins do not interact with it alone. GP30  is a potential ligand for this receptor. Regulates outgrowth and  stabilization of peripheral microtubules (MTs). Upon ERBB2  activation, the MEMO1-RHOA-DIAPH1 signaling pathway elicits the  phosphorylation and thus the inhibition of GSK3B at cell membrane.  This prevents the phosphorylation of APC and CLASP2, allowing its  association with the cell membrane. In turn, membrane-bound APC  allows the localization of MACF1 to the cell membrane, which is  required for microtubule capture and stabilization. (from UniProt P04626)
AP2B1 (ENST00000621914.4) at chr17:35587274-35726409 - Homo sapiens adaptor related protein complex 2 subunit beta 1 (AP2B1), transcript variant 2, mRNA. (from RefSeq NM_001282)
AP2B1 (ENST00000610402.5) at chr17:35587322-35726413 - Homo sapiens adaptor related protein complex 2 subunit beta 1 (AP2B1), transcript variant 1, mRNA. (from RefSeq NM_001030006)
ERBB2 (ENST00000584601.5) at chr17:39687914-39728361 - Homo sapiens erb-b2 receptor tyrosine kinase 2 (ERBB2), transcript variant 2, mRNA. (from RefSeq NM_001005862)
ERBB2 (ENST00000541774.5) at chr17:39699560-39728662 - Homo sapiens erb-b2 receptor tyrosine kinase 2 (ERBB2), transcript variant 3, mRNA. (from RefSeq NM_001289936)
SRC (ENST00000373578.6) at chr20:37346154-37406050 - Homo sapiens SRC proto-oncogene, non-receptor tyrosine kinase (SRC), transcript variant 2, mRNA. (from RefSeq NM_198291)
AP2B1 (ENST00000618940.4) at chr17:35587515-35724086 - Component of the adaptor protein complex 2 (AP-2).  Adaptor protein complexes function in protein transport via  transport vesicles in different membrane traffic pathways. Adaptor  protein complexes are vesicle coat components and appear to be  involved in cargo selection and vesicle formation. AP-2 is  involved in clathrin-dependent endocytosis in which cargo proteins  are incorporated into vesicles surrounded by clathrin (clathrin-  coated vesicles, CCVs) which are destined for fusion with the  early endosome. The clathrin lattice serves as a mechanical  scaffold but is itself unable to bind directly to membrane  components. Clathrin-associated adaptor protein (AP) complexes  which can bind directly to both the clathrin lattice and to the  lipid and protein components of membranes are considered to be the  major clathrin adaptors contributing the CCV formation. AP-2 also  serves as a cargo receptor to selectively sort the membrane  proteins involved in receptor-mediated endocytosis. AP-2 seems to  play a role in the recycling of synaptic vesicle membranes from  the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi)  and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the  cytosolic tails of transmembrane cargo molecules. AP-2 may also  play a role in maintaining normal post-endocytic trafficking  through the ARF6-regulated, non-clathrin pathway. The AP-2 beta  subunit acts via its C-terminal appendage domain as a scaffolding  platform for endocytic accessory proteins; at least some clathrin-  associated sorting proteins (CLASPs) are recognized by their [DE]-  X(1,2)-F-X-X-[FL]-X-X-X-R motif. The AP-2 beta subunit binds to  clathrin heavy chain, promoting clathrin lattice assembly;  clathrin displaces at least some CLASPs from AP2B1 which probably  then can be positioned for further coat assembly. (from UniProt P63010)
ARRB1 (ENST00000360025.7) at chr11:75265599-75351705 - Homo sapiens arrestin beta 1 (ARRB1), transcript variant 2, mRNA. (from RefSeq NM_020251)
ARRB1 (ENST00000420843.7) at chr11:75260122-75351661 - Homo sapiens arrestin beta 1 (ARRB1), transcript variant 1, mRNA. (from RefSeq NM_004041)
ARRB2 (ENST00000412477.7) at chr17:4710693-4721496 - Homo sapiens arrestin beta 2 (ARRB2), transcript variant 3, mRNA. (from RefSeq NM_001257328)
ARRB2 (ENST00000381488.10) at chr17:4710693-4721061 - Homo sapiens arrestin beta 2 (ARRB2), transcript variant 2, mRNA. (from RefSeq NM_199004)
ARRB2 (ENST00000346341.6) at chr17:4710634-4721499 - Homo sapiens arrestin beta 2 (ARRB2), transcript variant 6, mRNA. (from RefSeq NM_001257331)
ARRB2 (ENST00000269260.7) at chr17:4710632-4721497 - Homo sapiens arrestin beta 2 (ARRB2), transcript variant 1, mRNA. (from RefSeq NM_004313)
CLTCL1 (ENST00000427926.6) at chr22:19179473-19291719 - Homo sapiens clathrin heavy chain like 1 (CLTCL1), transcript variant 1, mRNA. (from RefSeq NM_007098)
CLTCL1 (ENST00000622493.4) at chr22:19179476-19207676 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000621271.4) at chr22:19179473-19291685 - Homo sapiens clathrin heavy chain like 1 (CLTCL1), transcript variant 2, mRNA. (from RefSeq NM_001835)
CLTCL1 (ENST00000617926.4) at chr22:19179775-19207674 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000617103.4) at chr22:19180733-19291661 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000615606.4) at chr22:19180733-19291661 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000611723.1) at chr22:19196363-19209327 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000540896.1) at chr22:19229845-19232821 - clathrin heavy chain like 1 (from HGNC CLTCL1)
CLTCL1 (ENST00000538828.1) at chr22:19183476-19187728 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0YGJ9)
CLTCL1 (ENST00000458188.2) at chr22:19221573-19226320 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0Y529)
CLTCL1 (ENST00000449918.1) at chr22:19254034-19291716 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F5H5N6)
CLTCL1 (ENST00000412649.5) at chr22:19179476-19184831 - clathrin heavy chain like 1 (from HGNC CLTCL1)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_004859.3 at chr17:59619689-59696956
NM_001288653.1 at chr17:59619689-59696956
NM_007098.3 at chr22:19179473-19291716
NM_001835.3 at chr22:19179473-19291716

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_005257012.4 at chr17:59619689-59695112
XM_011530401.2 at chr22:19179473-19226606
XR_001755311.2 at chr22:19179473-19291714
XR_001755312.2 at chr22:19179473-19291714
XM_017028955.2 at chr22:19179473-19291714
XM_017028953.2 at chr22:19179473-19291714
XM_017028956.2 at chr22:19179473-19291714
XR_001755313.2 at chr22:19179473-19291714
XR_001755314.2 at chr22:19179473-19291714
XM_017028954.2 at chr22:19179473-19291714
XR_001755309.2 at chr22:19179663-19291714
XR_937923.3 at chr22:19180199-19291714
XR_001755310.2 at chr22:19180733-19291714
XM_017028957.2 at chr22:19199757-19291714

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

CLTC at chr17:59619895-59696956
CLTCL1 at chr22:19179473-19291719

RefSeq Genes

CLTC at chr17:59619689-59696956 - (NM_001288653) clathrin heavy chain 1 isoform 2
CLTC at chr17:59619895-59696956 - (NM_004859) clathrin heavy chain 1 isoform 1
CLTCL1 at chr22:19179474-19291719 - (NM_001835) clathrin heavy chain 2 isoform 2
CLTCL1 at chr22:19179474-19291719 - (NM_007098) clathrin heavy chain 2 isoform 1

Non-Human RefSeq Genes

CLTC at chr17:59620132-59693852 - (NM_001146127) clathrin heavy chain 1
cltc at chr17:59620129-59694679 - (NM_001011039) clathrin heavy chain 1
CLTC at chr17:59620132-59694762 - (NM_001080117) clathrin heavy chain 1
CLTC at chr17:59620132-59694676 - (NM_174023) clathrin heavy chain 1
Cltc at chr17:59620104-59694802 - (NM_019299) clathrin heavy chain 1
Cltc at chr17:59619874-59694841 - (NM_001003908) clathrin heavy chain 1 isoform 2
Cltc at chr17:59619874-59694841 - (NM_001356393) clathrin heavy chain 1 isoform 1
cltc.L at chr17:59620129-59694679 - (NM_001092391) clathrin, heavy chain (Hc) L homeolog
cltca at chr22:19183387-19291641 - (NM_001005391) clathrin, heavy polypeptide a
cltca at chr17:59620132-59693828 - (NM_001005391) clathrin, heavy polypeptide a
cltcb at chr17:59620132-59694167 - (NM_001194978) clathrin, heavy chain b (Hc)

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619932-59694114

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

CLTC at chr17:59619689-59696956
CLTC at chr17:59619858-59690826
CLTC at chr17:59619858-59696310
CLTC at chr17:59619924-59647502
CLTC at chr17:59619932-59694114
CLTC at chr17:59619943-59651316
CLTC at chr17:59647646-59648695
CLTC at chr17:59648240-59656231
CLTC at chr17:59655961-59663992
CLTC at chr17:59664690-59667066
CLTC at chr17:59670982-59677141
CLTC at chr17:59683714-59684509
CLTC at chr17:59683906-59693822
CLTC at chr17:59685117-59687147
CLTC at chr17:59689156-59695112

International Knockout Mouse Consortium Genes Mapped to Human Genome

Cltc_46011 at chr17:59619689-59696956
Cltc_77110 at chr17:59619689-59696956
Cltc_89316 at chr17:59619689-59696956
Cltc_93902 at chr17:59619689-59696956

Human Aligned mRNA Search Results

BC113030 - Homo sapiens clathrin, heavy chain-like 1, mRNA (cDNA clone IMAGE:40021667), partial cds.
BC036430 - Homo sapiens clathrin, heavy chain (Hc), mRNA (cDNA clone IMAGE:4812912), complete cds.
BC051800 - Homo sapiens clathrin, heavy chain (Hc), mRNA (cDNA clone MGC:57689 IMAGE:6187185), complete cds.
U60802 - Human clathrin heavy chain 2 (CLTCL) mRNA, longer alternatively spliced transcript, complete cds.
U60803 - Human clathrin heavy chain 2 (CLTCL) mRNA, complete cds.
BC054489 - Homo sapiens clathrin, heavy chain (Hc), mRNA (cDNA clone MGC:51918 IMAGE:6045540), complete cds.
L77568 - Homo sapiens clathrin heavy chain-like (CLTCL) mRNA, 3' end.
AK294147 - Homo sapiens cDNA FLJ58099 complete cds, highly similar to Homo sapiens clathrin, heavy polypeptide-like 1 (CLTCL1), transcript variant 1, mRNA.

Non-Human Aligned mRNA Search Results

KY217736 - Oncorhynchus clarkii CLTC-type clathrin heavy chain b (cltc-b) mRNA, complete cds.
KY217735 - Oncorhynchus clarkii CLTC-type clathrin heavy chain a2 (cltc-a2) mRNA, complete cds.
KY217734 - Oncorhynchus clarkii CLTC-type clathrin heavy chain a1 (cltc-a1) mRNA, complete cds.
BC031408 - Mus musculus clathrin, heavy polypeptide (Hc), mRNA (cDNA clone IMAGE:4949242), partial cds.
BC163714 - Danio rerio clathrin, heavy polypeptide a (Hc), mRNA (cDNA clone MGC:194792 IMAGE:9038766), complete cds.
BC079897 - Mus musculus clathrin, heavy polypeptide (Hc), mRNA (cDNA clone MGC:92975 IMAGE:30546407), complete cds.
HQ890183 - Equus caballus clone 09_a05 clathrin heavy chain 1-like protein (CLTC) mRNA, partial cds.
KY974296 - Procambarus clarkii clathrin heavy chain (CLTC) mRNA, partial cds.
FM210346 - Sus scrofa mRNA for clathrin heavy chain (CLTC gene).
JT405355 - TSA: Ictalurus punctatus clc_263258 mRNA sequence.
JU332871 - TSA: Macaca mulatta Mamu_501490 mRNA sequence.
JU471585 - TSA: Macaca mulatta Mamu_369667 mRNA sequence.
JV043235 - TSA: Macaca mulatta Mamu_403397 mRNA sequence.
JV046162 - TSA: Macaca mulatta Mamu_403396 mRNA sequence.
JV635554 - TSA: Macaca mulatta Mamu_460877 mRNA sequence.
AB172840 - Macaca fascicularis brain cDNA clone: QflA-19796, similar to human clathrin, heavy polypeptide (Hc) (CLTC), mRNA, RefSeq: NM_004859.2.
AB171700 - Macaca fascicularis brain cDNA clone: QtrA-13288, similar to human clathrin, heavy polypeptide (Hc) (CLTC), mRNA, RefSeq: NM_004859.2.
AB170687 - Macaca fascicularis brain cDNA clone: QmoA-12177, similar to human clathrin, heavy polypeptide (Hc) (CLTC), mRNA, RefSeq: NM_004859.2.
AB169455 - Macaca fascicularis testis cDNA, clone: QtsA-20892, similar to human clathrin, heavy polypeptide-like 1 (CLTCL1), transcriptvariant 2, mRNA, RefSeq: NM_007098.1.