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UCSC Genes

CLCN2 (uc003foi.4) at chr3:184063973-184079439 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 1, mRNA.
CLCN2 (uc011brn.2) at chr3:184072843-184079439 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 4, mRNA.
CLCN2 (uc011brm.3) at chr3:184063973-184079439 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 3, mRNA.
CLCN2 (uc011brl.3) at chr3:184063973-184079439 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 4, mRNA.
CLCN2 (uc010hya.3) at chr3:184063973-184079439 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 2, mRNA.
CLCN2 (uc003foh.4) at chr3:184063973-184074882 - Homo sapiens chloride channel, voltage-sensitive 2 (CLCN2), transcript variant 3, mRNA.
SGK1 (uc003qen.4) at chr6:134490384-134496034 - Homo sapiens serum/glucocorticoid regulated kinase 1 (SGK1), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_004366.5 at chr3:184063973-184079439
NM_001171089.2 at chr3:184063973-184079439
NM_001171087.2 at chr3:184063973-184079439
NM_001171088.2 at chr3:184063973-184079439

RefSeq Genes

CLCN2 at chr3:184063973-184079393 - (NM_001171087) chloride channel protein 2 isoform 2
CLCN2 at chr3:184063973-184079393 - (NM_004366) chloride channel protein 2 isoform 1
CLCN2 at chr3:184063973-184079393 - (NM_001171089) chloride channel protein 2 isoform 4
CLCN2 at chr3:184063973-184079393 - (NM_001171088) chloride channel protein 2 isoform 3

Non-Human RefSeq Genes

CLCN2 at chr3:184063993-184079272 - (NM_001102487) chloride channel protein 2
Clcn2 at chr3:184064381-184079283 - (NM_001172930) chloride channel protein 2
Clcn2 at chr3:184064049-184079650 - (NM_009900) chloride channel protein 2
Clcn2 at chr3:184064023-184079390 - (NM_017137) chloride channel protein 2
CLCN2 at chr3:184063980-184079264 - (NM_001082751) chloride channel protein 2
clcn2a at chr3:184064406-184076919 - (NM_001328709) chloride channel protein 2
clcn2b at chr3:184064502-184079243 - (NM_001316315) chloride channel, voltage-sensitive 2b
clcn2c at chr3:184069800-184075884 - (NM_001319271) chloride channel 2c

Basic Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

CLCN2 at chr3:184063973-184079393
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391

Comprehensive Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

CLCN2 at chr3:184063973-184079393
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063985-184067354
CLCN2 at chr3:184063987-184076529
CLCN2 at chr3:184063987-184079417
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064018-184079243
CLCN2 at chr3:184064061-184079438
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070082-184075485
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184070534-184071483
CLCN2 at chr3:184071110-184079236
CLCN2 at chr3:184071156-184079232
CLCN2 at chr3:184071977-184072747
CLCN2 at chr3:184072054-184075837
CLCN2 at chr3:184072098-184076895
CLCN2 at chr3:184072371-184075484
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073699-184075475
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CLCN2 at chr3:184063973-184079393
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CLCN2 at chr3:184063973-184079393
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063985-184067354
CLCN2 at chr3:184063987-184076529
CLCN2 at chr3:184063987-184079417
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064018-184079243
CLCN2 at chr3:184064061-184079438
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070082-184075485
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184070534-184071483
CLCN2 at chr3:184071110-184079236
CLCN2 at chr3:184071156-184079232
CLCN2 at chr3:184071977-184072747
CLCN2 at chr3:184072054-184075837
CLCN2 at chr3:184072098-184076895
CLCN2 at chr3:184072371-184075484
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073699-184075475
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063985-184067354
CLCN2 at chr3:184063987-184076529
CLCN2 at chr3:184063987-184079417
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064018-184079243
CLCN2 at chr3:184064061-184079438
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070082-184075485
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184070534-184071483
CLCN2 at chr3:184071110-184079236
CLCN2 at chr3:184071156-184079232
CLCN2 at chr3:184071977-184072747
CLCN2 at chr3:184072054-184075837
CLCN2 at chr3:184072098-184076895
CLCN2 at chr3:184072371-184075484
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073699-184075475
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063985-184067354
CLCN2 at chr3:184063987-184076529
CLCN2 at chr3:184063987-184079417
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064018-184079243
CLCN2 at chr3:184064061-184079438
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070082-184075485
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184070534-184071483
CLCN2 at chr3:184071110-184079236
CLCN2 at chr3:184071156-184079232
CLCN2 at chr3:184071977-184072747
CLCN2 at chr3:184072054-184075837
CLCN2 at chr3:184072098-184076895
CLCN2 at chr3:184072371-184075484
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073699-184075475
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073191-184074817
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from GENCODE Version 19

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184073191-184074817

Comprehensive Gene Annotation Set from GENCODE Version 19

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073191-184074817
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184073191-184074817

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073191-184074817
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184073191-184074817

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073191-184074817
CLCN2 at chr3:184075760-184076446

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184073191-184074817

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

CLCN2 at chr3:184063973-184079439
CLCN2 at chr3:184063976-184079390
CLCN2 at chr3:184063979-184079391
CLCN2 at chr3:184064009-184074808
CLCN2 at chr3:184064186-184079391
CLCN2 at chr3:184064308-184079391
CLCN2 at chr3:184070204-184071084
CLCN2 at chr3:184072843-184079274
CLCN2 at chr3:184073191-184074817
CLCN2 at chr3:184075760-184076446

International Knockout Mouse Consortium Genes Mapped to Human Genome

Clcn2_71905 at chr3:184063976-184079391
Clcn2_78938 at chr3:184063976-184079391
Clcn2_VG11626 at chr3:184063976-184079391

Human Aligned mRNA Search Results

BC021578 - Homo sapiens chloride channel 2, mRNA (cDNA clone IMAGE:4331579), complete cds.
BC072004 - Homo sapiens chloride channel 2, mRNA (cDNA clone MGC:88707 IMAGE:6424015), complete cds.
KU177981 - Homo sapiens chloride channel 2 isoform 1 (CLCN2) mRNA, partial cds, alternatively spliced.
KU177982 - Homo sapiens chloride channel 2 isoform 2 (CLCN2) mRNA, partial cds.
KU177983 - Homo sapiens chloride channel 2 isoform 3 (CLCN2) mRNA, partial cds, alternatively spliced.
KU177984 - Homo sapiens chloride channel 2 isoform 4 (CLCN2) mRNA, partial cds, alternatively spliced.
KU177985 - Homo sapiens chloride channel 2 isoform 5 (CLCN2) mRNA, complete cds, alternatively spliced.

Non-Human Aligned mRNA Search Results

BC148963 - Bos taurus chloride channel 2, mRNA (cDNA clone MGC:139321 IMAGE:8209854), complete cds.
LN610102 - Danio rerio mRNA for clc-2b chloride channel (clcn2b gene).
LN610101 - Danio rerio mRNA for clc-2a chloride channel (clcn2a gene).
LN610100 - Danio rerio mRNA for clc-2c chloride channel (clcn2c gene).
AF097415 - Mus musculus chloride channel CLC-2 (Clcn2) mRNA, complete cds.
BC120699 - Mus musculus chloride channel 2, mRNA (cDNA clone MGC:155936 IMAGE:40129622), complete cds.
BC137625 - Mus musculus chloride channel 2, mRNA (cDNA clone MGC:169249 IMAGE:8860644), complete cds.
JU321374 - TSA: Macaca mulatta Mamu_521799 mRNA sequence.
JV046144 - TSA: Macaca mulatta Mamu_417283 mRNA sequence.

Ensembl Genes

CLCN2 at chr3:184073191-184074817 - (ENST00000475279)
CLCN2 at chr3:184070204-184071084 - (ENST00000491162)
CLCN2 at chr3:184064186-184079391 - (ENST00000434054)
CLCN2 at chr3:184063979-184079391 - (ENST00000423355)
CLCN2 at chr3:184063973-184079439 - (ENST00000265593)
CLCN2 at chr3:184063976-184079390 - (ENST00000344937)
CLCN2 at chr3:184064009-184074808 - (ENST00000430397)
CLCN2 at chr3:184064308-184079391 - (ENST00000457512)
CLCN2 at chr3:184072843-184079274 - (ENST00000485667)
CLCN2 at chr3:184075760-184076446 - (ENST00000465231)

GeneReviews

CLCN2-Related Leukoencephalopathy at chr3:184063973-184079439 - (CLCN2)

Vega Protein-Coding Annotations

OTTHUMT00000345571 at chr3:184063973-184079439
OTTHUMT00000345574 at chr3:184063976-184079390
OTTHUMT00000345576 at chr3:184064009-184074808
OTTHUMT00000345573 at chr3:184064186-184079391
OTTHUMT00000345572 at chr3:184064308-184079391
OTTHUMT00000345578 at chr3:184070204-184071084
OTTHUMT00000345575 at chr3:184072843-184079274
OTTHUMT00000345577 at chr3:184073191-184074817
OTTHUMT00000345579 at chr3:184075760-184076446