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Gencode Genes

CDK2AP1 (ENST00000261692.7) at chr12:123260976-123271856 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 1, mRNA. (from RefSeq NM_004642)
CDK2AP1 (ENST00000652466.1) at chr12:123250112-123268317 - specific inhibitor of the cell-cycle kinase CDK2 (By  similarity). (from UniProt O14519)
CDK2AP1 (ENST00000618072.4) at chr12:123260971-123268254 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 3, mRNA. (from RefSeq NM_001270434)
CDK2AP1 (ENST00000544890.1) at chr12:123258977-123261219 - cyclin dependent kinase 2 associated protein 1 (from HGNC CDK2AP1)
CDK2AP1 (ENST00000544658.5) at chr12:123261276-123272334 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 4, non-coding RNA. (from RefSeq NR_073007)
CDK2AP1 (ENST00000543217.6) at chr12:123252030-123260447 - cyclin dependent kinase 2 associated protein 1 (from HGNC CDK2AP1)
CDK2AP1 (ENST00000542427.6) at chr12:123258748-123260503 - cyclin dependent kinase 2 associated protein 1 (from HGNC CDK2AP1)
CDK2AP1 (ENST00000542174.5) at chr12:123261012-123268077 - specific inhibitor of the cell-cycle kinase CDK2 (By  similarity). (from UniProt O14519)
CDK2AP1 (ENST00000541002.7) at chr12:123252242-123261483 - cyclin dependent kinase 2 associated protein 1 (from HGNC CDK2AP1)
CDK2AP1 (ENST00000538446.5) at chr12:123261003-123269239 - specific inhibitor of the cell-cycle kinase CDK2 (By  similarity). (from UniProt O14519)
CDK2AP1 (ENST00000535979.5) at chr12:123261003-123271141 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 5, non-coding RNA. (from RefSeq NR_073008)
CDK2AP1 (ENST00000535796.1) at chr12:123265193-123268284 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F5GZF0)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001270434.1 at chr12:123260970-123268254
NM_001270433.1 at chr12:123260970-123270234
NR_073008.1 at chr12:123260970-123271102
NM_004642.3 at chr12:123260970-123272140
NR_073007.1 at chr12:123260970-123272316

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

CDK2AP1 at chr12:123260976-123271856

RefSeq Genes

CDK2AP1 at chr12:123260976-123271856 - (NM_004642) cyclin-dependent kinase 2-associated protein 1 isoform 1
CDK2AP1 at chr12:123260976-123270283 - (NM_001270433) cyclin-dependent kinase 2-associated protein 1 isoform 2
CDK2AP1 at chr12:123260970-123268254 - (NM_001270434) cyclin-dependent kinase 2-associated protein 1 isoform 2
CDK2AP1 at chr12:123260976-123272240 - (NR_073007) 
CDK2AP1 at chr12:123260970-123271102 - (NR_073008) 

Non-Human RefSeq Genes

CDK2AP1 at chr12:123261003-123269134 - (NM_001285183) cyclin-dependent kinase 2-associated protein 1
CDK2AP1 at chr12:123261736-123271621 - (NM_001245549) cyclin-dependent kinase 2-associated protein 1
CDK2AP1 at chr12:123261003-123271789 - (NM_001190166) cyclin-dependent kinase 2-associated protein 1
cdk2ap1 at chr12:123261006-123267283 - (NM_001016730) cyclin-dependent kinase 2-associated protein 1
Cdk2ap1 at chr12:123260992-123271625 - (NM_001281691) cyclin-dependent kinase 2-associated protein 1
Cdk2ap1 at chr12:123261006-123271812 - (NM_001113751) cyclin-dependent kinase 2-associated protein 1
CDK2AP1 at chr12:123260999-123271789 - (NM_001247976) cyclin-dependent kinase 2-associated protein 1
CDK2AP1 at chr12:123261006-123271872 - (NM_001076369) cyclin-dependent kinase 2-associated protein 1
CDK2AP1 at chr12:123260993-123271789 - (NM_001039264) cyclin-dependent kinase 2-associated protein 1
Cdk2ap1 at chr12:123261006-123271847 - (NM_013812) cyclin-dependent kinase 2-associated protein 1
cdk2ap1.S at chr12:123261006-123271621 - (NM_001087388) cyclin-dependent kinase 2 associated protein 1 S homeolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260976-123271856
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

CDK2AP1 at chr12:123250112-123268317
CDK2AP1 at chr12:123252030-123260447
CDK2AP1 at chr12:123252242-123261483
CDK2AP1 at chr12:123258748-123260503
CDK2AP1 at chr12:123258977-123261219
CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260976-123271856
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

CDK2AP1 at chr12:123260971-123268254
CDK2AP1 at chr12:123260981-123272140
CDK2AP1 at chr12:123261003-123269239
CDK2AP1 at chr12:123261003-123271141
CDK2AP1 at chr12:123261012-123268077
CDK2AP1 at chr12:123261276-123272334
CDK2AP1 at chr12:123265193-123268284

Retroposed Genes V9, Including Pseudogenes

CDK2AP1 at chr13:44452572-44453530 - (NM_001270433.1-4)
CDK2AP1 at chr3:120483468-120484504 - (NR_073007.1-11)
CDK2AP1 at chr2:7324005-7325074 - (NM_004642.3-9)
CDK2AP1 at chr13:44452572-44453530 - (NM_001270433.1-4)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Cdk2ap1_75032 at chr12:123260991-123272140

BC034717 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1099  100.0%         12     - 123261006 123271639  BC034717     1  1099  1146

Human Unaligned mRNA Search Results

NR_073007 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 4, non-coding RNA.
NR_073008 - Homo sapiens cyclin dependent kinase 2 associated protein 1 (CDK2AP1), transcript variant 5, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC054285 - Xenopus laevis CDK2-associated protein 1, mRNA (cDNA clone MGC:64532 IMAGE:6878329), complete cds.
BC147053 - Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1, mRNA (cDNA clone MGC:182154 IMAGE:9056048), complete cds.
BC158683 - Rattus norvegicus cyclin-dependent kinase 2-associated protein 1, mRNA (cDNA clone MGC:187692 IMAGE:8373627), complete cds.
MG135721 - Synthetic construct Xenopus tropicalis clone IMAGE:7876524 cyclin-dependent kinase 2 associated protein 1 (cdk2ap1) gene, encodes complete protein.
CR760030 - Xenopus tropicalis finished cDNA, clone TNeu019f12.
BC121523 - Xenopus tropicalis cyclin-dependent kinase 2 associated protein 1, mRNA (cDNA clone MGC:146912 IMAGE:7876524), complete cds.
BC083075 - Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1, mRNA (cDNA clone IMAGE:6440764), complete cds.
BC103772 - Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1, mRNA (cDNA clone IMAGE:6476229), complete cds.
BC147052 - Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1, mRNA (cDNA clone MGC:182150 IMAGE:9056044), complete cds.
BC123623 - Bos taurus cyclin-dependent kinase 2 associated protein 1, mRNA (cDNA clone MGC:142662 IMAGE:8387238), complete cds.
JU477339 - TSA: Macaca mulatta Mamu_398862 mRNA sequence.
JV048329 - TSA: Macaca mulatta Mamu_423441 mRNA sequence.
AB174635 - Macaca fascicularis brain cDNA clone: QtrA-18371, similar to human CDK2-associated protein 1 (CDK2AP1), mRNA, RefSeq: NM_004642.2.