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UCSC Genes

CD44 (uc001mvu.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 1, mRNA.
CD44 (uc021qfw.1) at chr11:35160417-35244867 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 8, mRNA.
CD44 (uc010reu.2) at chr11:35211382-35236461 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 2, mRNA.
CD44 (uc010ret.2) at chr11:35211382-35236461 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 3, mRNA.
CD44 (uc010res.2) at chr11:35211382-35236461 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 2, mRNA.
CD44 (uc010rer.2) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 7, mRNA.
CD44 (uc009ykh.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 4, mRNA.
CD44 (uc001mwc.4) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 6, mRNA.
CD44 (uc001mvy.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 5, mRNA.
CD44 (uc001mvx.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 4, mRNA.
CD44 (uc001mvw.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 3, mRNA.
CD44 (uc001mvv.3) at chr11:35160417-35253949 - Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 2, mRNA.
KHDRBS2 (uc003peg.2) at chr6:62389865-62996100 - Homo sapiens KH domain containing, RNA binding, signal transduction associated 2 (KHDRBS2), mRNA.
ESRP1 (uc003ygq.4) at chr8:95653364-95719694 - Homo sapiens epithelial splicing regulatory protein 1 (ESRP1), transcript variant 1, mRNA.
KHDRBS3 (uc003yuv.3) at chr8:136469716-136659848 - Homo sapiens KH domain containing, RNA binding, signal transduction associated 3 (KHDRBS3), mRNA.
ESRP2 (uc010cfa.1) at chr16:68262450-68270136 - Homo sapiens epithelial splicing regulatory protein 2 (ESRP2), mRNA.
SCYL3 (uc001ggs.3) at chr1:169822215-169863100 - Homo sapiens SCY1-like 3 (S. cerevisiae) (SCYL3), transcript variant 2, mRNA.
SMARCA4 (uc010dxo.3) at chr19:11071598-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 3, mRNA.
SMARCA4 (uc010dxt.1) at chr19:11123438-11145808 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 7, mRNA.
SMARCA4 (uc002mqi.1) at chr19:11131257-11145808 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 7, mRNA.
SMARCA4 (uc002mqh.4) at chr19:11129690-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 6, mRNA.
SMARCA4 (uc002mqe.2) at chr19:11071598-11107056 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 3, mRNA.
SMARCA4 (uc010dxs.3) at chr19:11094800-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 1, mRNA.
SMARCA4 (uc010dxr.3) at chr19:11094800-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 1, mRNA.
SMARCA4 (uc010dxq.3) at chr19:11094800-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 1, mRNA.
SMARCA4 (uc002mqj.4) at chr19:11094800-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 1, mRNA.
SMARCA4 (uc010dxp.3) at chr19:11071598-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 2, mRNA.
SMARCA4 (uc002mqf.4) at chr19:11071598-11172958 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 3, mRNA.
SMARCA4 (uc002mqg.1) at chr19:11094800-11143342 - Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), transcript variant 1, mRNA.
HAS2 (uc003yph.2) at chr8:122625271-122653630 - Homo sapiens hyaluronan synthase 2 (HAS2), mRNA.
HAS1 (uc002pxp.1) at chr19:52216365-52227221 - Homo sapiens hyaluronan synthase 1 (HAS1), mRNA.
HAS1 (uc002pxo.1) at chr19:52216365-52227221 - Homo sapiens hyaluronan synthase 1 (HAS1), mRNA.
HAS1 (uc002pxn.1) at chr19:52216365-52223194 - Homo sapiens hyaluronan synthase 1 (HAS1), mRNA.
IGF2BP3 (uc003swg.3) at chr7:23349828-23509995 - Homo sapiens insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3), mRNA.
SLC7A11 (uc021xrw.1) at chr4:139085248-139163503 - Homo sapiens solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 (SLC7A11), mRNA.
SRGN (uc001joz.3) at chr10:70847828-70864567 - Homo sapiens serglycin (SRGN), transcript variant 1, mRNA.
SRGN (uc021prx.1) at chr10:70847828-70864567 - Homo sapiens serglycin (SRGN), transcript variant 2, non-coding RNA.
KLF1 (uc002mvo.3) at chr19:12995237-12998017 - Homo sapiens Kruppel-like factor 1 (erythroid) (KLF1), mRNA.
IGF2BP1 (uc002iom.3) at chr17:47074774-47133507 - Homo sapiens insulin-like growth factor 2 mRNA binding protein 1 (IGF2BP1), transcript variant 1, mRNA.
PKN2 (uc010osq.2) at chr1:89149922-89301938 - Homo sapiens protein kinase N2 (PKN2), mRNA.
PKN2 (uc001dmn.3) at chr1:89149922-89301938 - Homo sapiens protein kinase N2 (PKN2), mRNA.
PKN2 (uc010osr.2) at chr1:89246722-89301938 - Homo sapiens protein kinase N2 (PKN2), mRNA.
LCK (uc001buy.3) at chr1:32739712-32751766 - Homo sapiens lymphocyte-specific protein tyrosine kinase (LCK), transcript variant 1, mRNA.
LCK (uc001bux.3) at chr1:32716840-32751766 - Homo sapiens lymphocyte-specific protein tyrosine kinase (LCK), transcript variant 2, mRNA.
LCK (uc010ohc.1) at chr1:32739741-32745811 - Homo sapiens lymphocyte-specific protein tyrosine kinase (LCK), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001202557.1 at chr11:35160417-35244867
NM_001001392.1 at chr11:35160417-35253949
NM_001202556.1 at chr11:35160417-35253949
NM_001001391.1 at chr11:35160417-35253949
NM_001202555.1 at chr11:35160417-35253949
NM_001001390.1 at chr11:35160417-35253949
NM_001001389.1 at chr11:35160417-35253949
NM_000610.3 at chr11:35160417-35253949

RefSeq Genes

CD44 at chr11:35160718-35244866 - (NM_001202557) CD44 antigen isoform 8 precursor
CD44 at chr11:35160718-35253949 - (NM_001001391) CD44 antigen isoform 4 precursor
CD44 at chr11:35160718-35253949 - (NM_001202556) CD44 antigen isoform 7 precursor
CD44 at chr11:35160718-35253949 - (NM_001202555) CD44 antigen isoform 6 precursor
CD44 at chr11:35160718-35253949 - (NM_001001390) CD44 antigen isoform 3 precursor
CD44 at chr11:35160718-35253949 - (NM_000610) CD44 antigen isoform 1 precursor
CD44 at chr11:35160718-35253949 - (NM_001001392) CD44 antigen isoform 5 precursor
CD44 at chr11:35160718-35253949 - (NM_001001389) CD44 antigen isoform 2 precursor

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, transcript variant 2 at chr18:3466248-3478976 - (NR_110428.1)
CD44 molecule (Indian blood group), transcript variant 7 at chr11:35160417-35253949 - (NM_001202556.1)
CD44 molecule (Indian blood group), transcript variant 5 at chr11:35160417-35253949 - (NM_001001392.1)
CD44 molecule (Indian blood group), transcript variant 3 at chr11:35160417-35253949 - (NM_001001390.1)
CD44 molecule (Indian blood group), transcript variant 1 at chr11:35160417-35253949 - (NM_000610.3)
CD44 molecule (Indian blood group), transcript variant 2 at chr11:35160417-35253949 - (NM_001001389.1)
CD44 molecule (Indian blood group), transcript variant 4 at chr11:35160417-35253949 - (NM_001001391.1)
CD44 molecule (Indian blood group), transcript variant 6 at chr11:35160417-35253949 - (NM_001202555.1)
CD44 molecule (Indian blood group), transcript variant 8 at chr11:35160417-35244867 - (NM_001202557.1)
gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, transcript variant 1 at chr18:3466248-3478976 - (NR_110429.1)

Non-Human RefSeq Genes

Cd44 at chr11:35160588-35253922 - (NM_001039150) CD44 antigen isoform b precursor
Cd44 at chr11:35160588-35253922 - (NM_009851) CD44 antigen isoform a precursor
Cd44 at chr11:35160588-35253922 - (NM_001177786) CD44 antigen isoform e precursor
Cd44 at chr11:35160588-35253922 - (NM_001039151) CD44 antigen isoform c precursor
Cd44 at chr11:35160588-35253922 - (NM_001177785) CD44 antigen isoform d precursor
Cd44 at chr11:35160588-35253922 - (NM_001177787) CD44 antigen isoform f precursor
Cd44 at chr11:35160842-35252273 - (NM_001281873) CD44 antigen isoform 1 precursor
Cd44 at chr11:35160842-35252273 - (NM_001281874) CD44 antigen isoform 2 precursor
Cd44 at chr11:35198118-35251869 - (NM_012924) CD44 antigen precursor
CD44 at chr11:35160845-35251501 - (NM_174013) CD44 antigen precursor
CD44 at chr11:35160846-35250994 - (NM_001085435) CD44 antigen precursor
CD44 at chr11:35160734-35251218 - (NM_001197022) CD44 antigen precursor
CD44 at chr11:35160718-35251574 - (NM_001132384) CD44 antigen precursor

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198657
CD44 at chr11:35160717-35251015
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35201930-35243220

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198657
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160809-35229684
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198122-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35231516
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35201930-35243220
CD44 at chr11:35208390-35232856
CD44 at chr11:35208409-35232804
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35232800
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198657
CD44 at chr11:35160717-35251015
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35201930-35243220

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198657
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160809-35229684
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198122-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35231516
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35201930-35243220
CD44 at chr11:35208390-35232856
CD44 at chr11:35208409-35232804
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35232800
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35201930-35243220

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35201930-35243220
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from GENCODE Version 19

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35218709-35220102

Comprehensive Gene Annotation Set from GENCODE Version 19

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35218709-35220102

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251007
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35218709-35220102

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198118-35251007
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160728-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35218709-35220102

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

CD44 at chr11:35160417-35253949
CD44 at chr11:35160429-35198684
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160717-35251015
CD44 at chr11:35160718-35231521
CD44 at chr11:35160728-35251574
CD44 at chr11:35160729-35251574
CD44 at chr11:35160735-35251574
CD44 at chr11:35160833-35250880
CD44 at chr11:35160840-35251213
CD44 at chr11:35160851-35250880
CD44 at chr11:35160853-35244867
CD44 at chr11:35198118-35227801
CD44 at chr11:35198118-35251007
CD44 at chr11:35198121-35236408
CD44 at chr11:35198175-35250869
CD44 at chr11:35198188-35229753
CD44 at chr11:35198209-35211976
CD44 at chr11:35198246-35223314
CD44 at chr11:35201826-35232857
CD44 at chr11:35201905-35222183
CD44 at chr11:35208390-35231608
CD44 at chr11:35208409-35231612
CD44 at chr11:35211382-35226456
CD44 at chr11:35211429-35250711
CD44 at chr11:35211438-35250791
CD44 at chr11:35211447-35232889
CD44 at chr11:35211473-35226358
CD44 at chr11:35211557-35223300
CD44 at chr11:35218709-35220102
CD44 at chr11:35219404-35223278
CD44 at chr11:35222630-35231609
CD44 at chr11:35222691-35227594
CD44 at chr11:35223168-35243263
CD44 at chr11:35223226-35232948
CD44 at chr11:35227262-35229711
CD44 at chr11:35236213-35250993
CD44 at chr11:35240476-35243278
CD44 at chr11:35240891-35251336

International Knockout Mouse Consortium Genes Mapped to Human Genome

Cd44_48146 at chr11:35160417-35253949
Cd44_66297 at chr11:35160417-35253949
Cd44_VG15102 at chr11:35160417-35253949

Alias of STS Marker

CD44 at chr11:35150850-35350999 - (RH27326)
CD44 at chr11:35150850-35350999 - (RH27326)

Human Aligned mRNA Search Results

X55938 - Human mRNA for CD44E core protein.
X55150 - Human mRNA for CD44E (epithelial form).
U94902 - Human soluble CD44 (CD44) mRNA, with exon v9 extension, partial cds.
U94903 - Human soluble CD44 (CD44) mRNA, with exon v10 extension, partial cds.
U40373 - Human cell surface glycoprotein CD44 mRNA, complete cds.
S66400 - CD44=CD44SP {alternatively spliced} [human, breast carcinoma cell line MCF-7, mRNA Partial, 1586 nt].
M31165 - Human tumor necrosis factor-inducible (TSG-6) mRNA fragment, adhesion receptor CD44 putative CDS.
AF160476 - Homo sapiens CD44-like precursor FELL mRNA, complete cds.
AF098641 - Homo sapiens CD44 isoform RC (CD44) mRNA, complete cds.
BC004372 - Homo sapiens CD44 molecule (Indian blood group), mRNA (cDNA clone MGC:10468 IMAGE:3638681), complete cds.
BC067348 - Homo sapiens CD44 molecule (Indian blood group), mRNA (cDNA clone IMAGE:4842331), complete cds.
AY101192 - Homo sapiens CD44 antigen (CD44) mRNA, complete cds.
AY101193 - Homo sapiens CD44 antigen (CD44) mRNA, complete cds.
D28447 - Homo sapiens mRNA for CD44 antigen, 5'UTR region.
EF581837 - Homo sapiens CD44 variant mRNA, complete cds, alternatively spliced.
BC052287 - Homo sapiens CD44 molecule (Indian blood group), mRNA (cDNA clone IMAGE:5428516), complete cds.
FJ216964 - Homo sapiens CD44 mRNA, complete cds, alternatively spliced.
X62739 - H.sapiens mRNA for variant CD44.
X56794 - H.sapiens CD44R mRNA.
AJ251595 - Homo sapiens mRNA for transmembrane glycoprotein (CD44 gene).
M59040 - Human cell adhesion molecule (CD44) mRNA, complete cds.
M83324 - Human cell surface glycoprotein CD44 mRNA, (variant B) exon 1.
M83325 - Human cell surface glycoprotein CD44 mRNA, (variant C) exons 1 and 2.
M83326 - Human cell surface glycoprotein CD44 mRNA, (variant D) exon 1, 2, and 3.
M83327 - Human cell surface glycoprotein CD44 mRNA, (variant E) exons 1, 2, 3, and 4.
M83328 - Human cell surface glycoprotein CD44 mRNA, (variant F) exons 1, 2, 3, and 5.
S82326 - CD44=cell-cell and cell-matrix adhesion interaction glycoprotein isoform {alternatively spliced, exon 4-exon 13 junction region} [human, papillary thyroid carcinoma and contralateral thyroid tissue, thyroid carcinoma patient, mRNA Mutant, 530 nt].
AK304467 - Homo sapiens cDNA FLJ60041 complete cds, highly similar to CD44 antigen precursor.
AK297776 - Homo sapiens cDNA FLJ52702 complete cds, highly similar to Homo sapiens CD44 antigen (homing function and Indian blood group system) (CD44), transcript variant 4, mRNA.
AK290424 - Homo sapiens cDNA FLJ76654 complete cds, highly similar to Homo sapiens CD44 antigen (homing function and Indian blood group system) (CD44), transcript variant 4, mRNA.
AK129808 - Homo sapiens cDNA FLJ26297 fis, clone DMC07218, highly similar to Homo sapiens CD44 antigen (homing function and Indian blood group system) (CD44).

Human Unaligned mRNA Search Results

NR_110428 - Homo sapiens gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA (GAPLINC), transcript variant 2, long non-coding RNA.
NR_110429 - Homo sapiens gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA (GAPLINC), transcript variant 1, long non-coding RNA.

Ensembl Genes

CD44 at chr11:35240476-35243278 - (ENST00000531141)
CD44 at chr11:35227262-35229711 - (ENST00000532339)
CD44 at chr11:35223168-35243263 - (ENST00000525293)
CD44 at chr11:35222630-35231609 - (ENST00000526553)
CD44 at chr11:35218709-35220102 - (ENST00000528922)
CD44 at chr11:35211473-35226358 - (ENST00000525241)
CD44 at chr11:35211438-35250791 - (ENST00000278385)
CD44 at chr11:35211382-35226456 - (ENST00000534296)
CD44 at chr11:35208390-35231608 - (ENST00000531110)
CD44 at chr11:35201826-35232857 - (ENST00000531873)
CD44 at chr11:35198209-35211976 - (ENST00000531118)
CD44 at chr11:35198175-35250869 - (ENST00000279452)
CD44 at chr11:35198118-35227801 - (ENST00000525211)
CD44 at chr11:35160851-35250880 - (ENST00000352818)
CD44 at chr11:35160833-35250880 - (ENST00000278386)
CD44 at chr11:35160729-35251007 - (ENST00000526669)
CD44 at chr11:35160728-35251574 - (ENST00000428726)
CD44 at chr11:35160717-35251015 - (ENST00000415148)
CD44 at chr11:35160717-35251015 - (ENST00000449691)
CD44 at chr11:35160717-35251015 - (ENST00000360158)
CD44 at chr11:35160417-35253949 - (ENST00000263398)
CD44 at chr11:35160429-35198684 - (ENST00000526025)
CD44 at chr11:35160717-35251015 - (ENST00000437706)
CD44 at chr11:35160717-35251015 - (ENST00000433354)
CD44 at chr11:35160718-35231521 - (ENST00000528086)
CD44 at chr11:35160729-35251574 - (ENST00000425428)
CD44 at chr11:35160735-35251574 - (ENST00000433892)
CD44 at chr11:35160840-35251213 - (ENST00000434472)
CD44 at chr11:35160853-35244867 - (ENST00000442151)
CD44 at chr11:35198121-35236408 - (ENST00000526000)
CD44 at chr11:35198188-35229753 - (ENST00000527889)
CD44 at chr11:35198246-35223314 - (ENST00000528455)
CD44 at chr11:35201905-35222183 - (ENST00000525209)
CD44 at chr11:35208409-35231612 - (ENST00000525685)
CD44 at chr11:35211429-35250711 - (ENST00000525688)
CD44 at chr11:35211447-35232889 - (ENST00000533222)
CD44 at chr11:35211557-35223300 - (ENST00000524922)
CD44 at chr11:35219404-35223278 - (ENST00000525348)
CD44 at chr11:35222691-35227594 - (ENST00000534082)
CD44 at chr11:35223226-35232948 - (ENST00000528672)
CD44 at chr11:35236213-35250993 - (ENST00000527326)
CD44 at chr11:35240891-35251336 - (ENST00000525469)

Vega Protein-Coding Annotations

OTTHUMT00000103323 at chr11:35198122-35244867
OTTHUMT00000103322 at chr11:35198122-35251568
OTTHUMT00000103321 at chr11:35198122-35250916
OTTHUMT00000103320 at chr11:35198122-35251574
OTTHUMT00000103319 at chr11:35198122-35251574