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UCSC Genes

CD3E (uc001psq.4) at chr11:118175295-118186890 - Homo sapiens CD3e molecule, epsilon (CD3-TCR complex) (CD3E), mRNA.
CD3E (uc010rya.2) at chr11:118175295-118184056 - Homo sapiens CD3e molecule, epsilon (CD3-TCR complex) (CD3E), mRNA.
TCF7 (uc003kyt.3) at chr5:133450402-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 1, mRNA.
TCF7 (uc003kyy.3) at chr5:133451298-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 5, mRNA.
TCF7 (uc003kyx.3) at chr5:133451350-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 6, non-coding RNA.
TCF7 (uc003kyw.3) at chr5:133451298-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 2, mRNA.
TCF7 (uc003kyv.3) at chr5:133451298-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 4, mRNA.
TCF7 (uc003kzb.3) at chr5:133477155-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 2, mRNA.
TCF7 (uc003kza.3) at chr5:133451600-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 4, mRNA.
TCF7 (uc003kyz.3) at chr5:133451600-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 4, mRNA.
TCF7 (uc003kyu.2) at chr5:133451298-133483920 - Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 3, mRNA.
ERCC1 (uc002pbv.3) at chr19:45916692-45926820 - Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1), transcript variant 1, mRNA.
ERCC1 (uc002pbt.2) at chr19:45910591-45927177 - Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1), transcript variant 3, mRNA.
ERCC1 (uc002pbs.2) at chr19:45910591-45927177 - Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1), transcript variant 2, mRNA.
CD3EAP (uc002pbq.1) at chr19:45909467-45914024 - Homo sapiens CD3e molecule, epsilon associated protein (CD3EAP), mRNA.
CD3EAP (uc002pbr.1) at chr19:45909949-45914024 - Homo sapiens CD3e molecule, epsilon associated protein (CD3EAP), mRNA.
POLR1E (uc003zzz.1) at chr9:37486150-37503693 - Homo sapiens polymerase (RNA) I polypeptide E, 53kDa (POLR1E), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_000733.3 at chr11:118175295-118186890
NM_012099.1 at chr19:45909467-45914024
NM_001297590.1 at chr19:45909467-45914024

RefSeq Genes

CD3E at chr11:118175445-118186888 - (NM_000733) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3EAP at chr19:45909902-45914024 - (NM_001297590) DNA-directed RNA polymerase I subunit RPA34 isoform 1
CD3EAP at chr19:45909902-45914024 - (NM_012099) DNA-directed RNA polymerase I subunit RPA34 isoform 2

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

CD3e molecule associated protein, transcript variant 1 at chr19:45909467-45914024 - (NM_001297590.1)
CD3e molecule at chr11:118175295-118186890 - (NM_000733.3)
CD3e molecule associated protein, transcript variant 2 at chr19:45909467-45914024 - (NM_012099.1)

Non-Human RefSeq Genes

CD3E at chr11:118183335-118186257 - (NM_001310174) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175640-118186418 - (NM_001257220) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118183334-118186379 - (NM_001082001) T-cell surface glycoprotein CD3 epsilon chain precursor
Cd3e at chr11:118183335-118186259 - (NM_001108140) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175668-118186257 - (NM_001283615) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175665-118186866 - (NM_214227) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175668-118186449 - (NM_001009862) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175448-118186545 - (NM_174011) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118183337-118186702 - (NM_001003379) T-cell surface glycoprotein CD3 epsilon chain precursor
Cd3e at chr11:118183335-118186269 - (NM_007648) T-cell surface glycoprotein CD3 epsilon chain precursor
CD3E at chr11:118175421-118186545 - (NM_001009418) T-cell surface glycoprotein CD3 epsilon chain precursor
Cd3eap at chr19:45910342-45912253 - (NM_001109416) DNA-directed RNA polymerase I subunit RPA34
CD3EAP at chr19:45910354-45912996 - (NM_001076485) DNA-directed RNA polymerase I subunit RPA34
Cd3eap at chr19:45909880-45912108 - (NM_145822) DNA-directed RNA polymerase I subunit RPA34

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from GENCODE Version 19

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from GENCODE Version 19

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

CD3E at chr11:118175260-118186890
CD3E at chr11:118175614-118186886

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

CD3E at chr11:118175260-118186890
CD3E at chr11:118175445-118184056
CD3E at chr11:118175445-118184459
CD3E at chr11:118175452-118186890
CD3E at chr11:118175614-118186886
CD3E at chr11:118182859-118186701

International Knockout Mouse Consortium Genes Mapped to Human Genome

Cd3eap_29505 at chr19:45909467-45914024
Cd3eap_70546 at chr19:45909467-45914024
Cd3e_44244 at chr11:118175295-118186890
Cd3e_76611 at chr11:118175295-118186890

Human Aligned mRNA Search Results

BC009705 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone IMAGE:3901859), partial cds.
BC046141 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone IMAGE:5581697), partial cds.
BC054044 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone IMAGE:6166782), partial cds.
AF017633 - Homo sapiens CD3e-associated protein (CAST) mRNA, complete cds.
BC038992 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone MGC:47680 IMAGE:6052122), complete cds.
BC108889 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone MGC:118851 IMAGE:40001010), complete cds.
BC049847 - Homo sapiens CD3e molecule, epsilon (CD3-TCR complex), mRNA (cDNA clone MGC:51948 IMAGE:5214563), complete cds.
BC065251 - Homo sapiens CD3e molecule, epsilon associated protein, mRNA (cDNA clone IMAGE:6140210).
AK292612 - Homo sapiens cDNA FLJ76365 complete cds, highly similar to Homo sapiens CD3E antigen, epsilon polypeptide (TiT3 complex) (CD3E), mRNA.
AK292183 - Homo sapiens cDNA FLJ75784 complete cds, highly similar to Homo sapiens CD3E antigen, epsilon polypeptide associated protein (CD3EAP), mRNA.

Non-Human Aligned mRNA Search Results

JP007239 - TSA: Mustela putorius furo MPF81002436contig1/1 mRNA sequence.
BT019937 - Synthetic construct Homo sapiens CD3E antigen, epsilon polypeptide (TiT3 complex) mRNA, partial cds.
AY890876 - Synthetic construct Homo sapiens clone FLH020926.01L CD3E antigen epsilon polypeptide (CD3E) mRNA, partial cds.
AY890877 - Synthetic construct Homo sapiens clone FLH020927.01L CD3E antigen epsilon polypeptide (CD3E) mRNA, partial cds.
BC029206 - Mus musculus CD3E antigen, epsilon polypeptide associated protein, mRNA (cDNA clone MGC:36811 IMAGE:4039808), complete cds.
BC071199 - Mus musculus CD3E antigen, epsilon polypeptide associated protein, mRNA (cDNA clone MGC:78047 IMAGE:6478245), complete cds.
BC016115 - Mus musculus CD3E antigen, epsilon polypeptide associated protein, mRNA (cDNA clone IMAGE:4485007), partial cds.
BC119897 - Bos taurus CD3e molecule, epsilon associated protein, mRNA (cDNA clone MGC:139726 IMAGE:8281662), complete cds.
JP007240 - TSA: Mustela putorius furo MPF81002437contig1/1 mRNA sequence.
BC102243 - Bos taurus CD3e molecule, epsilon (CD3-TCR complex), mRNA (cDNA clone MGC:126991 IMAGE:7898297), complete cds.
AB073993 - Macaca fascicularis Cd3e mRNA for CD3 epsilon FN18+, complete cds.
AB073994 - Macaca fascicularis Cd3e mRNA for CD3 epsilon FN18-, complete cds.
BC145926 - Mus musculus CD3 antigen, epsilon polypeptide, mRNA (cDNA clone MGC:175813 IMAGE:40131229), complete cds.
BC145954 - Mus musculus CD3 antigen, epsilon polypeptide, mRNA (cDNA clone MGC:175841 IMAGE:40131257), complete cds.
EF474454 - Mus musculus CD3 antigen epsilon polypeptide (Cd3e) mRNA, complete cds.
GU456631 - Mus musculus CD3 antigen epsilon polypeptide (Cd3e) mRNA, complete cds.
LT714145 - Phascogale calura partial mRNA for T-cell surface glycoprotein CD3 epsilon chain (CD3E gene).
JU328592 - TSA: Macaca mulatta Mamu_536331 mRNA sequence.
EU779496 - Sus scrofa clone WZSCD3e0801 CD3 epsilon chain (CD3e) mRNA, complete cds.
KC585001 - Mustela putorius furo CD3 epsilon chain (CD3e) mRNA, partial cds.
KY911279 - Bos grunniens T-cell surface glycoprotein CD3 epsilon chain (CD3e) mRNA, complete cds.
AB195838 - Felis catus cd3e mRNA for CD3 antigen epsilon subunit, complete cds, cell_type:T-lymphoblastoid.
AB195839 - Felis catus cd3e mRNA for CD3 antigen epsilon subunit, complete cds, cell_type:peripheral blood mononuclear cell.
AB195840 - Felis catus cd3e mRNA for CD3 antigen epsilon subunit, complete cds, cell_type:thymocyte.

Ensembl Genes

CD3EAP at chr19:45909949-45913044 - (ENST00000589804)
CD3EAP at chr19:45909467-45914024 - (ENST00000309424)
CD3E at chr11:118175614-118186886 - (ENST00000528600)
CD3E at chr11:118175445-118184056 - (ENST00000529713)
CD3E at chr11:118175260-118186890 - (ENST00000361763)
CD3E at chr11:118175445-118184459 - (ENST00000528435)
CD3E at chr11:118175452-118186890 - (ENST00000526146)
CD3E at chr11:118182859-118186701 - (ENST00000531913)
CD3EAP at chr19:45909920-45911877 - (ENST00000592852)
CD3EAP at chr19:45909957-45911859 - (ENST00000590794)