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Gencode Genes

C16orf87 (ENST00000285697.9) at chr16:46796603-46831180 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 1, mRNA. (from RefSeq NM_001001436)
C16orf87 (ENST00000565112.1) at chr16:46802718-46831068 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 5, non-coding RNA. (from RefSeq NR_145835)
C16orf87 (ENST00000564250.1) at chr16:46803003-46830759 - chromosome 16 open reading frame 87 (from HGNC C16orf87)
C16orf87 (ENST00000394806.6) at chr16:46796607-46831162 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 4, non-coding RNA. (from RefSeq NR_145834)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NR_145837.1 at chr16:46796607-46831063
NR_145835.1 at chr16:46796607-46831063
NR_145836.1 at chr16:46796607-46831063
NR_145834.1 at chr16:46796607-46831407
NM_001001436.3 at chr16:46796607-46831407
NM_001348661.1 at chr16:46796607-46831407
NM_001348660.1 at chr16:46796607-46831407

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_024450271.1 at chr16:46800172-46831471
XM_024450272.1 at chr16:46802986-46831471

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

C16orf87 at chr16:46796603-46831180

RefSeq Genes

C16orf87 at chr16:46796603-46831048 - (NR_145836) 
C16orf87 at chr16:46796603-46831048 - (NR_145835) 
C16orf87 at chr16:46796603-46831048 - (NR_145837) 
C16orf87 at chr16:46796603-46831180 - (NR_145834) 
C16orf87 at chr16:46796603-46831180 - (NM_001001436) UPF0547 protein C16orf87 isoform 1
C16orf87 at chr16:46796603-46831180 - (NM_001348661) UPF0547 protein C16orf87 isoform 3
C16orf87 at chr16:46796603-46831180 - (NM_001348660) UPF0547 protein C16orf87 isoform 2

Non-Human RefSeq Genes

4921524J17Rik at chr16:46801993-46831159 - (NM_025722) UPF0547 protein C16orf87 homolog
zgc:92818 at chr16:46802952-46831131 - (NM_001002512) UPF0547 protein C16orf87 homolog
C18H16orf87 at chr16:46802733-46831241 - (NM_001078045) UPF0547 protein C16orf87 homolog
c16orf87.L at chr16:46802952-46831122 - (NM_001094897) UPF0547 protein C16orf87 homolog
C11H16ORF87 at chr16:46802550-46831153 - (NM_001277573) UPF0547 protein C16orf87 homolog
C22H16orf87 at chr16:46802834-46831228 - (NM_001252134) UPF0547 protein C16orf87 homolog
c16orf87 at chr16:46802952-46831128 - (NM_001126641) UPF0547 protein C16orf87 homolog
RGD1308706 at chr16:46802049-46831159 - (NM_001134421) UPF0547 protein C16orf87 homolog
C20H16orf87 at chr16:46801752-46831251 - (NM_001194607) UPF0547 protein C16orf87 homolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

C16orf87 at chr16:46796603-46831180
C16orf87 at chr16:46796607-46831162

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

C16orf87 at chr16:46796603-46831180
C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

C16orf87 at chr16:46796607-46831162
C16orf87 at chr16:46802094-46831411
C16orf87 at chr16:46802718-46831068
C16orf87 at chr16:46803003-46830759

BC056676 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1383  100.0%         16     -  46802047  46831162  BC056676     5  1387  1415

Human Unaligned mRNA Search Results

NR_145836 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 6, non-coding RNA.
NR_145835 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 5, non-coding RNA.
NR_145837 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 7, non-coding RNA.
NR_145834 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 4, non-coding RNA.

Non-Human Aligned mRNA Search Results

JL625441 - TSA: Equus caballus contig10049.EqcaPBMC mRNA sequence.
JU334449 - TSA: Macaca mulatta Mamu_501532 mRNA sequence.
JU475540 - TSA: Macaca mulatta Mamu_363193 mRNA sequence.
JV047022 - TSA: Macaca mulatta Mamu_423821 mRNA sequence.