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UCSC Genes

C16orf87 (uc002eek.1) at chr16:46835959-46865074 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001001436.2 at chr16:46835959-46865074

RefSeq Genes

C16orf87 at chr16:46830515-46864960 - (NR_145836) 
C16orf87 at chr16:46830515-46864960 - (NR_145835) 
C16orf87 at chr16:46830515-46864960 - (NR_145837) 
C16orf87 at chr16:46830515-46865092 - (NR_145834) 
C16orf87 at chr16:46830515-46865092 - (NM_001001436) UPF0547 protein C16orf87 isoform 1
C16orf87 at chr16:46830515-46865092 - (NM_001348661) UPF0547 protein C16orf87 isoform 3
C16orf87 at chr16:46830515-46865092 - (NM_001348660) UPF0547 protein C16orf87 isoform 2

Non-Human RefSeq Genes

4921524J17Rik at chr16:46835905-46865088 - (NM_025722) UPF0547 protein C16orf87 homolog
zgc:92818 at chr16:46836864-46865062 - (NM_001002512) UPF0547 protein C16orf87 homolog
C18H16orf87 at chr16:46836629-46865089 - (NM_001078045) UPF0547 protein C16orf87 homolog
c16orf87.L at chr16:46836864-46865034 - (NM_001094897) UPF0547 protein C16orf87 homolog
C11H16ORF87 at chr16:46836864-46865065 - (NM_001277573) UPF0547 protein C16orf87 homolog
C22H16orf87 at chr16:46836745-46865076 - (NM_001252134) UPF0547 protein C16orf87 homolog
c16orf87 at chr16:46836864-46865040 - (NM_001126641) UPF0547 protein C16orf87 homolog
RGD1308706 at chr16:46836106-46865071 - (NM_001134421) UPF0547 protein C16orf87 homolog
C20H16orf87 at chr16:46835664-46865163 - (NM_001194607) UPF0547 protein C16orf87 homolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

C16orf87 at chr16:46830515-46865092
C16orf87 at chr16:46830519-46865074

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

C16orf87 at chr16:46830515-46865092
C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from GENCODE Version 19

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836915-46864671

Comprehensive Gene Annotation Set from GENCODE Version 19

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836915-46864671

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836915-46864671

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

C16orf87 at chr16:46830519-46865074
C16orf87 at chr16:46836006-46865323
C16orf87 at chr16:46836630-46864980
C16orf87 at chr16:46836915-46864671

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

C16orf87 at chr16:46835933-46865169
C16orf87 at chr16:46835959-46865074

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

C16orf87 at chr16:46835933-46865169
C16orf87 at chr16:46835959-46865074

BC056676 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1383  100.0%         16     -  46835959  46865074  BC056676     5  1387  1415

Human Unaligned mRNA Search Results

NR_145836 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 6, non-coding RNA.
NR_145835 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 5, non-coding RNA.
NR_145837 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 7, non-coding RNA.
NR_145834 - Homo sapiens chromosome 16 open reading frame 87 (C16orf87), transcript variant 4, non-coding RNA.

Non-Human Aligned mRNA Search Results

JL625441 - TSA: Equus caballus contig10049.EqcaPBMC mRNA sequence.
JU334449 - TSA: Macaca mulatta Mamu_501532 mRNA sequence.
JU475540 - TSA: Macaca mulatta Mamu_363193 mRNA sequence.
JV047022 - TSA: Macaca mulatta Mamu_423821 mRNA sequence.

Ensembl Genes

C16orf87 at chr16:46836630-46864980 - (ENST00000565112)
C16orf87 at chr16:46830519-46865074 - (ENST00000394806)
C16orf87 at chr16:46836006-46865323 - (ENST00000285697)
C16orf87 at chr16:46836915-46864671 - (ENST00000564250)

Vega Protein-Coding Annotations

OTTHUMT00000255738 at chr16:46835933-46865169