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Gencode Genes

BLM (ENST00000355112.8) at chr15:90717346-90816166 - Homo sapiens BLM RecQ like helicase (BLM), transcript variant 4, mRNA. (from RefSeq NM_001287248)
BLM (ENST00000648453.1) at chr15:90717363-90815342 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000560821.1) at chr15:90808771-90815629 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000560559.1) at chr15:90790289-90794357 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000560509.5) at chr15:90717394-90815333 - Homo sapiens BLM RecQ like helicase (BLM), transcript variant 3, mRNA. (from RefSeq NM_001287247)
BLM (ENST00000560136.5) at chr15:90762396-90811327 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000559724.5) at chr15:90717404-90815328 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H0YLV8)
BLM (ENST00000559426.5) at chr15:90762364-90769181 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000559282.1) at chr15:90747390-90749960 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000558825.5) at chr15:90793801-90815361 - Bloom syndrome RecQ like helicase (from HGNC BLM)
BLM (ENST00000558599.1) at chr15:90750008-90760822 - Bloom syndrome RecQ like helicase (from HGNC BLM)
RMI2 (ENST00000576027.1) at chr16:11345450-11351365 - Homo sapiens RecQ mediated genome instability 2 (RMI2), transcript variant 2, non-coding RNA. (from RefSeq NR_130754)
RMI2 (ENST00000312499.6) at chr16:11345459-11351760 - Homo sapiens RecQ mediated genome instability 2 (RMI2), transcript variant 1, mRNA. (from RefSeq NM_152308)
RMI2 (ENST00000572173.1) at chr16:11249649-11351755 - Essential component of the RMI complex, a complex that  plays an important role in the processing of homologous  recombination intermediates to limit DNA crossover formation in  cells. The complex is therefore essential for the stability,  localization, and function of complexes containing BLM. In the RMI  complex, it is required to target BLM to chromatin and stress-  induced nuclear foci and mitotic phosphorylation of BLM. (from UniProt Q96E14)
FANCD2 (ENST00000431693.1) at chr3:10028620-10041562 - Required for maintenance of chromosomal stability.  Promotes accurate and efficient pairing of homologs during  meiosis. Involved in the repair of DNA double-strand breaks, both  by homologous recombination and single-strand annealing. May  participate in S phase and G2 phase checkpoint activation upon DNA  damage. Plays a role in preventing breakage and loss of  missegregating chromatin at the end of cell division, particularly  after replication stress. Required for the targeting, or  stabilization, of BLM to non-centromeric abnormal structures  induced by replicative stress. Promotes BRCA2/FANCD1 loading onto  damaged chromatin. May also be involved in B-cell immunoglobulin  isotype switching. (from UniProt Q9BXW9)
DNA2 (ENST00000399180.3) at chr10:68414989-68472121 - Key enzyme involved in DNA replication and DNA repair in  nucleus and mitochondrion. Involved in Okazaki fragments  processing by cleaving long flaps that escape FEN1: flaps that are  longer than 27 nucleotides are coated by replication protein A  complex (RPA), leading to recruit DNA2 which cleaves the flap  until it is too short to bind RPA and becomes a substrate for  FEN1. Also involved in 5'-end resection of DNA during double-  strand break (DSB) repair: recruited by BLM and mediates the  cleavage of 5'-ssDNA, while the 3'-ssDNA cleavage is prevented by  the presence of RPA. Also involved in DNA replication checkpoint  independently of Okazaki fragments processing. Possesses different  enzymatic activities, such as single-stranded DNA (ssDNA)-  dependent ATPase, 5'-3' helicase and endonuclease activities.  While the ATPase and endonuclease activities are well-defined and  play a key role in Okazaki fragments processing and DSB repair,  the 5'-3' DNA helicase activity is subject to debate. According to  various reports, the helicase activity is weak and its function  remains largely unclear. Helicase activity may promote the motion  of DNA2 on the flap, helping the nuclease function. (from UniProt P51530)
TOP3A (ENST00000321105.10) at chr17:18271428-18314994 - Homo sapiens DNA topoisomerase III alpha (TOP3A), transcript variant 1, mRNA. (from RefSeq NM_004618)
TOP3A (ENST00000640743.2) at chr17_KV766198v1_alt:31802-75368 - Homo sapiens DNA topoisomerase III alpha (TOP3A), transcript variant 1, mRNA. (from RefSeq NM_004618)
RMI1 (ENST00000325875.7) at chr9:83980798-84004074 - Homo sapiens RecQ mediated genome instability 1 (RMI1), transcript variant 2, mRNA. (from RefSeq NM_024945)
DNA2 (ENST00000358410.8) at chr10:68414064-68471973 - Homo sapiens DNA replication helicase/nuclease 2 (DNA2), transcript variant 1, mRNA. (from RefSeq NM_001080449)
DNA2 (ENST00000399179.6) at chr10:68414989-68472121 - Homo sapiens DNA replication helicase/nuclease 2 (DNA2), transcript variant 2, non-coding RNA. (from RefSeq NR_102264)
MUS81 (ENST00000308110.9) at chr11:65860433-65866439 - Homo sapiens MUS81 structure-specific endonuclease subunit (MUS81), transcript variant 3, non-coding RNA. (from RefSeq NR_146598)
FANCI (ENST00000567996.5) at chr15:89244017-89264651 - Plays an essential role in the repair of DNA double-  strand breaks by homologous recombination and in the repair of  interstrand DNA cross-links (ICLs) by promoting FANCD2  monoubiquitination by FANCL and participating in recruitment to  DNA repair sites. Required for maintenance of chromosomal  stability. Specifically binds branched DNA: binds both single-  stranded DNA (ssDNA) and double-stranded DNA (dsDNA). Participates  in S phase and G2 phase checkpoint activation upon DNA damage. (from UniProt Q9NVI1)
SUPV3L1 (ENST00000359655.9) at chr10:69180234-69209093 - Homo sapiens Suv3 like RNA helicase (SUPV3L1), transcript variant 9, non-coding RNA. (from RefSeq NR_136627)
FANCD2 (ENST00000419585.5) at chr3:10026499-10101930 - Homo sapiens FA complementation group D2 (FANCD2), transcript variant 3, mRNA. (from RefSeq NM_001319984)
FANCD2 (ENST00000383807.5) at chr3:10026429-10101930 - Homo sapiens FA complementation group D2 (FANCD2), transcript variant 2, mRNA. (from RefSeq NM_001018115)
FANCD2 (ENST00000287647.7) at chr3:10026414-10099660 - Homo sapiens FA complementation group D2 (FANCD2), transcript variant 1, mRNA. (from RefSeq NM_033084)
FANCI (ENST00000300027.12) at chr15:89243949-89317261 - Homo sapiens FA complementation group I (FANCI), transcript variant 2, mRNA. (from RefSeq NM_018193)
FANCI (ENST00000310775.11) at chr15:89243967-89317129 - Homo sapiens FA complementation group I (FANCI), transcript variant 1, mRNA. (from RefSeq NM_001113378)
TERF1 (ENST00000276602.10) at chr8:73008864-73048122 - Homo sapiens telomeric repeat binding factor 1 (TERF1), transcript variant 2, mRNA. (from RefSeq NM_003218)
TERF1 (ENST00000276603.10) at chr8:73008864-73048123 - Homo sapiens telomeric repeat binding factor 1 (TERF1), transcript variant 1, mRNA. (from RefSeq NM_017489)
MRE11 (ENST00000407439.7) at chr11:94419866-94493843 - Component of the MRN complex, which plays a central role  in double-strand break (DSB) repair, DNA recombination,  maintenance of telomere integrity and meiosis. The complex  possesses single-strand endonuclease activity and double-strand-  specific 3'-5' exonuclease activity, which are provided by MRE11A.  RAD50 may be required to bind DNA ends and hold them in close  proximity. This could facilitate searches for short or long  regions of sequence homology in the recombining DNA templates, and  may also stimulate the activity of DNA ligases and/or restrict the  nuclease activity of MRE11A to prevent nucleolytic degradation  past a given point. The complex may also be required for DNA  damage signaling via activation of the ATM kinase. In telomeres  the MRN complex may modulate t-loop formation. (from UniProt P49959)
TOP3A (ENST00000638894.1) at chr17_KV766198v1_alt:34295-75381 - Releases the supercoiling and torsional tension of DNA  introduced during the DNA replication and transcription by  transiently cleaving and rejoining one strand of the DNA duplex.  Introduces a single-strand break via transesterification at a  target site in duplex DNA. The scissile phosphodiester is attacked  by the catalytic tyrosine of the enzyme, resulting in the  formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the  expulsion of a 3'-OH DNA strand. The free DNA strand than  undergoes passage around the unbroken strand thus removing DNA  supercoils. Finally, in the religation step, the DNA 3'-OH attacks  the covalent intermediate to expel the active-site tyrosine and  restore the DNA phosphodiester backbone (By similarity). Essential  component of the RMI complex, a complex that plays an important  role in the processing of homologous recombination intermediates  to limit DNA crossover formation in cells. (from UniProt Q13472)
TOP3A (ENST00000580095.5) at chr17:18274804-18314703 - Releases the supercoiling and torsional tension of DNA  introduced during the DNA replication and transcription by  transiently cleaving and rejoining one strand of the DNA duplex.  Introduces a single-strand break via transesterification at a  target site in duplex DNA. The scissile phosphodiester is attacked  by the catalytic tyrosine of the enzyme, resulting in the  formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the  expulsion of a 3'-OH DNA strand. The free DNA strand than  undergoes passage around the unbroken strand thus removing DNA  supercoils. Finally, in the religation step, the DNA 3'-OH attacks  the covalent intermediate to expel the active-site tyrosine and  restore the DNA phosphodiester backbone (By similarity). Essential  component of the RMI complex, a complex that plays an important  role in the processing of homologous recombination intermediates  to limit DNA crossover formation in cells. (from UniProt Q13472)
TOP3A (ENST00000542570.5) at chr17:18273921-18315007 - Releases the supercoiling and torsional tension of DNA  introduced during the DNA replication and transcription by  transiently cleaving and rejoining one strand of the DNA duplex.  Introduces a single-strand break via transesterification at a  target site in duplex DNA. The scissile phosphodiester is attacked  by the catalytic tyrosine of the enzyme, resulting in the  formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the  expulsion of a 3'-OH DNA strand. The free DNA strand than  undergoes passage around the unbroken strand thus removing DNA  supercoils. Finally, in the religation step, the DNA 3'-OH attacks  the covalent intermediate to expel the active-site tyrosine and  restore the DNA phosphodiester backbone (By similarity). Essential  component of the RMI complex, a complex that plays an important  role in the processing of homologous recombination intermediates  to limit DNA crossover formation in cells. (from UniProt Q13472)
TOP3A (ENST00000639065.1) at chr17_KV766198v1_alt:35178-75077 - Releases the supercoiling and torsional tension of DNA  introduced during the DNA replication and transcription by  transiently cleaving and rejoining one strand of the DNA duplex.  Introduces a single-strand break via transesterification at a  target site in duplex DNA. The scissile phosphodiester is attacked  by the catalytic tyrosine of the enzyme, resulting in the  formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the  expulsion of a 3'-OH DNA strand. The free DNA strand than  undergoes passage around the unbroken strand thus removing DNA  supercoils. Finally, in the religation step, the DNA 3'-OH attacks  the covalent intermediate to expel the active-site tyrosine and  restore the DNA phosphodiester backbone (By similarity). Essential  component of the RMI complex, a complex that plays an important  role in the processing of homologous recombination intermediates  to limit DNA crossover formation in cells. (from UniProt Q13472)
MSH2 (ENST00000233146.6) at chr2:47402969-47483228 - Homo sapiens mutS homolog 2 (MSH2), transcript variant 1, mRNA. (from RefSeq NM_000251)
MSH2 (ENST00000543555.5) at chr2:47403067-47483227 - Homo sapiens mutS homolog 2 (MSH2), transcript variant 2, mRNA. (from RefSeq NM_001258281)
MSH6 (ENST00000540021.5) at chr2:47783082-47806945 - Homo sapiens mutS homolog 6 (MSH6), transcript variant 2, mRNA. (from RefSeq NM_001281492)
MSH6 (ENST00000538136.1) at chr2:47783955-47806945 - Homo sapiens mutS homolog 6 (MSH6), transcript variant 4, mRNA. (from RefSeq NM_001281494)
MSH6 (ENST00000614496.4) at chr2:47783082-47806945 - Homo sapiens mutS homolog 6 (MSH6), transcript variant 3, mRNA. (from RefSeq NM_001281493)
MSH6 (ENST00000234420.9) at chr2:47783082-47810101 - Homo sapiens mutS homolog 6 (MSH6), transcript variant 1, mRNA. (from RefSeq NM_000179)
NBN (ENST00000265433.7) at chr8:89933336-89984716 - Homo sapiens nibrin (NBN), transcript variant 1, mRNA. (from RefSeq NM_002485)
MRE11 (ENST00000323977.7) at chr11:94419876-94493874 - Homo sapiens MRE11 homolog, double strand break repair nuclease (MRE11), transcript variant 2, mRNA. (from RefSeq NM_005590)
MLH1 (ENST00000536378.5) at chr3:36993350-37050842 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 19, mRNA. (from RefSeq NM_001354626)
MLH1 (ENST00000455445.6) at chr3:36993798-37050706 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 20, mRNA. (from RefSeq NM_001354627)
MLH1 (ENST00000435176.5) at chr3:36993804-37050844 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 13, mRNA. (from RefSeq NM_001354620)
MLH1 (ENST00000539477.5) at chr3:36993777-37050842 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 8, mRNA. (from RefSeq NM_001354615)
MLH1 (ENST00000458205.6) at chr3:36993776-37050846 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 7, mRNA. (from RefSeq NM_001258274)
MRE11 (ENST00000323929.7) at chr11:94415578-94493908 - Homo sapiens MRE11 homolog, double strand break repair nuclease (MRE11), transcript variant 1, mRNA. (from RefSeq NM_005591)
PMS2 (ENST00000643595.1) at chr7:5973361-6009041 - Component of the post-replicative DNA mismatch repair  system (MMR). Heterodimerizes with MLH1 to form MutL alpha. DNA  repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-  MSH6) binding to a dsDNA mismatch, then MutL alpha is recruited to  the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary  complex in presence of RFC and PCNA is sufficient to activate  endonuclease activity of PMS2. It introduces single-strand breaks  near the mismatch and thus generates new entry points for the  exonuclease EXO1 to degrade the strand containing the mismatch.  DNA methylation would prevent cleavage and therefore assure that  only the newly mutated DNA strand is going to be corrected. MulL  alpha (MLH1-PMS2) interacts physically with the clamp loader  subunits of DNA polymerase III, suggesting that it may play a role  to recruit the DNA polymerase III to the site of the MMR. Also  implicated in DNA damage signaling, a process which induces cell  cycle arrest and can lead to apoptosis in case of major DNA  damages. (from UniProt P54278)
RAD50 (ENST00000378823.8) at chr5:132556977-132646349 - Homo sapiens RAD50 double strand break repair protein (RAD50), mRNA. (from RefSeq NM_005732)
PMS2 (ENST00000382321.5) at chr7:5973399-6009019 - Component of the post-replicative DNA mismatch repair  system (MMR). Heterodimerizes with MLH1 to form MutL alpha. DNA  repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-  MSH6) binding to a dsDNA mismatch, then MutL alpha is recruited to  the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary  complex in presence of RFC and PCNA is sufficient to activate  endonuclease activity of PMS2. It introduces single-strand breaks  near the mismatch and thus generates new entry points for the  exonuclease EXO1 to degrade the strand containing the mismatch.  DNA methylation would prevent cleavage and therefore assure that  only the newly mutated DNA strand is going to be corrected. MulL  alpha (MLH1-PMS2) interacts physically with the clamp loader  subunits of DNA polymerase III, suggesting that it may play a role  to recruit the DNA polymerase III to the site of the MMR. Also  implicated in DNA damage signaling, a process which induces cell  cycle arrest and can lead to apoptosis in case of major DNA  damages. (from UniProt P54278)
WRN (ENST00000298139.6) at chr8:31033810-31175916 - Homo sapiens WRN RecQ like helicase (WRN), mRNA. (from RefSeq NM_000553)
ATM (ENST00000278616.8) at chr11:108222832-108369099 - Homo sapiens ATM serine/threonine kinase (ATM), transcript variant 2, mRNA. (from RefSeq NM_000051)
ATM (ENST00000452508.6) at chr11:108223116-108369102 - Homo sapiens ATM serine/threonine kinase (ATM), transcript variant 1, mRNA. (from RefSeq NM_001351834)
PMS2 (ENST00000265849.12) at chr7:5970925-6009049 - Homo sapiens PMS1 homolog 2, mismatch repair system component (PMS2), transcript variant 15, non-coding RNA. (from RefSeq NR_136154)
MLH1 (ENST00000231790.6) at chr3:36993332-37050918 - Homo sapiens mutL homolog 1 (MLH1), transcript variant 23, mRNA. (from RefSeq NM_001354630)
TERF2 (ENST00000254942.8) at chr16:69355567-69386007 - Homo sapiens telomeric repeat binding factor 2 (TERF2), mRNA. (from RefSeq NM_005652)
BRCA1 (ENST00000491747.6) at chr17:43045678-43125356 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 4, mRNA. (from RefSeq NM_007298)
BRCA1 (ENST00000461221.5) at chr17:43045678-43125288 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 6, non-coding RNA. (from RefSeq NR_027676)
BRCA1 (ENST00000493795.5) at chr17:43045629-43125402 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 3, mRNA. (from RefSeq NM_007297)
BRCA1 (ENST00000468300.5) at chr17:43044805-43125451 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 5, mRNA. (from RefSeq NM_007299)
BRCA1 (ENST00000471181.7) at chr17:43044295-43125483 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 2, mRNA. (from RefSeq NM_007300)
BRCA1 (ENST00000357654.8) at chr17:43044295-43125483 - Homo sapiens BRCA1 DNA repair associated (BRCA1), transcript variant 1, mRNA. (from RefSeq NM_007294)
RPA1 (ENST00000254719.10) at chr17:1830005-1900082 - Homo sapiens replication protein A1 (RPA1), transcript variant 1, mRNA. (from RefSeq NM_002945)
BRCA1 (ENST00000461798.5) at chr17:43099831-43125370 - E3 ubiquitin-protein ligase that specifically mediates  the formation of 'Lys-6'-linked polyubiquitin chains and plays a  central role in DNA repair by facilitating cellular responses to  DNA damage. It is unclear whether it also mediates the formation  of other types of polyubiquitin chains. The E3 ubiquitin-protein  ligase activity is required for its tumor suppressor function. The  BRCA1-BARD1 heterodimer coordinates a diverse range of cellular  pathways such as DNA damage repair, ubiquitination and  transcriptional regulation to maintain genomic stability.  Regulates centrosomal microtubule nucleation. Required for normal  cell cycle progression from G2 to mitosis. Required for  appropriate cell cycle arrests after ionizing irradiation in both  the S-phase and the G2 phase of the cell cycle. Involved in  transcriptional regulation of P21 in response to DNA damage.  Required for FANCD2 targeting to sites of DNA damage. May function  as a transcriptional regulator. Inhibits lipid synthesis by  binding to inactive phosphorylated ACACA and preventing its  dephosphorylation. Contributes to homologous recombination repair  (HRR) via its direct interaction with PALB2, fine-tunes  recombinational repair partly through its modulatory role in the  PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA  breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1  activation and controls cell cycle G2/M checkpoints on DNA damage  via BRCA1-mediated ubiquitination of RBBP8. (from UniProt P38398)
BRCA1 (ENST00000352993.7) at chr17:43044295-43125370 - E3 ubiquitin-protein ligase that specifically mediates  the formation of 'Lys-6'-linked polyubiquitin chains and plays a  central role in DNA repair by facilitating cellular responses to  DNA damage. It is unclear whether it also mediates the formation  of other types of polyubiquitin chains. The E3 ubiquitin-protein  ligase activity is required for its tumor suppressor function. The  BRCA1-BARD1 heterodimer coordinates a diverse range of cellular  pathways such as DNA damage repair, ubiquitination and  transcriptional regulation to maintain genomic stability.  Regulates centrosomal microtubule nucleation. Required for normal  cell cycle progression from G2 to mitosis. Required for  appropriate cell cycle arrests after ionizing irradiation in both  the S-phase and the G2 phase of the cell cycle. Involved in  transcriptional regulation of P21 in response to DNA damage.  Required for FANCD2 targeting to sites of DNA damage. May function  as a transcriptional regulator. Inhibits lipid synthesis by  binding to inactive phosphorylated ACACA and preventing its  dephosphorylation. Contributes to homologous recombination repair  (HRR) via its direct interaction with PALB2, fine-tunes  recombinational repair partly through its modulatory role in the  PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA  breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1  activation and controls cell cycle G2/M checkpoints on DNA damage  via BRCA1-mediated ubiquitination of RBBP8. (from UniProt P38398)
TERF2 (ENST00000567296.6) at chr16:69370211-69385988 - Binds the telomeric double-stranded 5'-TTAGGG-3' repeat  and plays a central role in telomere maintenance and protection  against end-to-end fusion of chromosomes. In addition to its  telomeric DNA-binding role, required to recruit a number of  factors and enzymes required for telomere protection, including  the shelterin complex, TERF2IP/RAP1 and DCLRE1B/Apollo. Component  of the shelterin complex (telosome) that is involved in the  regulation of telomere length and protection. Shelterin associates  with arrays of double-stranded 5'-TTAGGG-3' repeats added by  telomerase and protects chromosome ends; without its protective  activity, telomeres are no longer hidden from the DNA damage  surveillance and chromosome ends are inappropriately processed by  DNA repair pathways. Together with DCLRE1B/Apollo, plays a key  role in telomeric loop (T loop) formation by generating 3' single-  stranded overhang at the leading end telomeres: T loops have been  proposed to protect chromosome ends from degradation and repair.  Required both to recruit DCLRE1B/Apollo to telomeres and activate  the exonuclease activity of DCLRE1B/Apollo. Preferentially binds  to positive supercoiled DNA. Together with DCLRE1B/Apollo,  required to control the amount of DNA topoisomerase (TOP1, TOP2A  and TOP2B) needed for telomere replication during fork passage and  prevent aberrant telomere topology. Recruits TERF2IP/RAP1 to  telomeres, thereby participating in to repressing homology-  directed repair (HDR), which can affect telomere length. (from UniProt Q15554)
BLMH (ENST00000261714.11) at chr17:30248203-30291944 - Homo sapiens bleomycin hydrolase (BLMH), mRNA. (from RefSeq NM_000386)
BLMH (ENST00000584603.2) at chr17:30272741-30291667 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000582749.1) at chr17:30290990-30292056 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000582669.1) at chr17:30273278-30285506 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000581037.5) at chr17:30271269-30287914 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KSD8)
BLMH (ENST00000580709.1) at chr17:30287824-30292042 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000579957.1) at chr17:30266885-30271493 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000579325.1) at chr17:30273765-30285539 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000578795.1) at chr17:30248205-30250283 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000578090.5) at chr17:30248822-30291849 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt J3KS79)
BLMH (ENST00000577623.5) at chr17:30266879-30291904 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000577306.1) at chr17:30272258-30273130 - bleomycin hydrolase (from HGNC BLMH)
BLMH (ENST00000577290.1) at chr17:30289414-30291994 - bleomycin hydrolase (from HGNC BLMH)
LACTBL1 (ENST00000618559.1) at chr1:22953049-22963178 - Belongs to the beta-lactamase family. (from UniProt A8MY62)
APP (ENST00000358918.7) at chr21:25881610-26170667 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 8, mRNA. (from RefSeq NM_001204301)
APP (ENST00000440126.7) at chr21:25881331-26140460 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 4, mRNA. (from RefSeq NM_001136016)
APP (ENST00000357903.7) at chr21:25880550-26170787 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 2, mRNA. (from RefSeq NM_201413)
APP (ENST00000354192.7) at chr21:25880550-26170747 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 5, mRNA. (from RefSeq NM_001136129)
APP (ENST00000348990.9) at chr21:25880550-26170767 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 3, mRNA. (from RefSeq NM_201414)
APP (ENST00000346798.8) at chr21:25880550-26170770 - Homo sapiens amyloid beta precursor protein (APP), transcript variant 1, mRNA. (from RefSeq NM_000484)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001287247.2 at chr15:90717346-90816166
NM_000057.4 at chr15:90717346-90816166
NM_001287248.2 at chr15:90717346-90816166
NM_001287246.2 at chr15:90717346-90816166
NM_000386.4 at chr17:30248203-30291944

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011521882.3 at chr15:90717398-90777945
XM_011521881.2 at chr15:90749983-90815370
XM_006720632.2 at chr15:90762364-90815462

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

BLM at chr15:90717346-90816166
BLMH at chr17:30248203-30291944

RefSeq Genes

BLM at chr15:90717346-90816166 - (NM_001287248) Bloom syndrome protein isoform 3
BLM at chr15:90717346-90816166 - (NM_001287246) Bloom syndrome protein isoform 1
BLM at chr15:90717346-90816166 - (NM_001287247) Bloom syndrome protein isoform 2
BLM at chr15:90717346-90816166 - (NM_000057) Bloom syndrome protein isoform 1
BLMH at chr17:30248203-30291944 - (NM_000386) bleomycin hydrolase

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

BLM RecQ like helicase, transcript variant 4 at chr15:90717346-90816166 - (NM_001287248.2)
BLM RecQ like helicase, transcript variant 2 at chr15:90717346-90816166 - (NM_001287246.2)
BLM RecQ like helicase, transcript variant 1 at chr15:90717346-90816166 - (NM_000057.4)
BLM RecQ like helicase, transcript variant 3 at chr15:90717346-90816166 - (NM_001287247.2)

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

BLM RecQ like helicase, transcript variant X2 at chr15:90749983-90815370 - (XM_011521881.2)
BLM RecQ like helicase, transcript variant X3 at chr15:90762364-90815462 - (XM_006720632.2)
BLM RecQ like helicase, transcript variant X1 at chr15:90717398-90777945 - (XM_011521882.3)

Non-Human RefSeq Genes

blm at chr15:90763007-90809258 - (NM_001256908) Bloom syndrome protein
Blm at chr15:90747387-90815452 - (NM_007550) Bloom syndrome protein homolog isoform 1
BLM at chr15:90747387-90815304 - (NM_001123084) Bloom syndrome protein
blm at chr15:90762992-90809246 - (NM_001104650) Bloom syndrome protein
BLM at chr15:90763004-90809258 - (NM_001007087) Bloom syndrome protein homolog
Blm at chr15:90747387-90815452 - (NM_001042527) Bloom syndrome protein homolog isoform 2
blm.S at chr15:90763004-90809258 - (NM_001085626) Bloom syndrome protein homolog
blmh at chr17:30249023-30289486 - (NM_001006899) bleomycin hydrolase
BLMH at chr17:30248265-30292037 - (NM_001303621) bleomycin hydrolase
BLMH at chr17:30249017-30291458 - (NM_205104) bleomycin hydrolase
Blmh at chr17:30248219-30292023 - (NM_001034163) bleomycin hydrolase
blmh at chr17:30249023-30289486 - (NM_200018) bleomycin hydrolase
Blmh at chr17:30248738-30292072 - (NM_178645) bleomycin hydrolase
blmh.S at chr17:30249017-30289486 - (NM_001095831) bleomycin hydrolase S homeolog

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

BLM at chr15:90717346-90816166
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

BLM at chr15:90717346-90816166
BLM at chr15:90717363-90815342
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

BLM at chr15:90717346-90816166
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

BLM at chr15:90717346-90816166
BLM at chr15:90717363-90815342
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

BLM at chr15:90717327-90816165
BLM at chr15:90717363-90815342
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

BLM at chr15:90717327-90816165
BLM at chr15:90717394-90815333
BLM at chr15:90717404-90815328
BLM at chr15:90747390-90749960
BLM at chr15:90750008-90760822
BLM at chr15:90762364-90769181
BLM at chr15:90762396-90811327
BLM at chr15:90790289-90794357
BLM at chr15:90793801-90815361
BLM at chr15:90808771-90815629

International Knockout Mouse Consortium Genes Mapped to Human Genome

Blmh_44438 at chr17:30248205-30292056
Blm_71595 at chr15:90717348-90815456
Blm_VG19655 at chr15:90717348-90815456

Human Aligned mRNA Search Results

BC107423 - Homo sapiens Bloom syndrome, mRNA (cDNA clone IMAGE:4699446), partial cds.
BC143280 - Homo sapiens Bloom syndrome, mRNA (cDNA clone MGC:176800 IMAGE:9051783), complete cds.
BC093622 - Homo sapiens Bloom syndrome, mRNA (cDNA clone MGC:120657 IMAGE:7939467), complete cds.
BC101567 - Homo sapiens Bloom syndrome, mRNA (cDNA clone MGC:126616 IMAGE:8069073), complete cds.
BC115030 - Homo sapiens Bloom syndrome, mRNA (cDNA clone MGC:131618 IMAGE:7961413), complete cds.
BC115032 - Homo sapiens Bloom syndrome, mRNA (cDNA clone MGC:131620 IMAGE:7961425), complete cds.
U39817 - Human Bloom's syndrome protein (BLM) mRNA, complete cds.
BC003616 - Homo sapiens bleomycin hydrolase, mRNA (cDNA clone MGC:1568 IMAGE:2989635), complete cds.

Non-Human Aligned mRNA Search Results

AB040747 - Gallus gallus Gd BLM mRNA, partial cds.
AB032092 - Gallus gallus BLM mRNA for BLM helicase, complete cds.
KF793916 - Mus musculus strain C57BL/6 x 129 Sox5-BLM isoform (Sox5) mRNA, complete cds.
DQ869383 - Mus musculus Bcl2-like molecule BLM-s mRNA, complete cds, alternatively spliced.
Z98263 - Mus musculus mRNA for Bloom's syndrome protein.
MG133336 - Synthetic construct Xenopus tropicalis clone IMAGE:5308959 bleomycin hydrolase (blmh) gene, encodes complete protein.
BC055572 - Danio rerio bleomycin hydrolase, mRNA (cDNA clone MGC:66261 IMAGE:5409952), complete cds.
BC074683 - Xenopus tropicalis bleomycin hydrolase, mRNA (cDNA clone MGC:69329 IMAGE:5308959), complete cds.
BC157095 - Synthetic construct Mus musculus clone IMAGE:100063374, MGC:191072 Bloom syndrome homolog (human) (Blm) mRNA, encodes complete protein.
BC024090 - Mus musculus bleomycin hydrolase, mRNA (cDNA clone MGC:37910 IMAGE:5102275), complete cds.
BC027037 - Mus musculus bleomycin hydrolase, mRNA (cDNA clone MGC:39026 IMAGE:5364667), complete cds.
BC027362 - Mus musculus bleomycin hydrolase, mRNA (cDNA clone MGC:36899 IMAGE:4935208), complete cds.
BC027403 - Mus musculus bleomycin hydrolase, mRNA (cDNA clone MGC:37104 IMAGE:4952098), complete cds.
BC128701 - Rattus norvegicus bleomycin hydrolase, mRNA (cDNA clone MGC:156497 IMAGE:7379958), complete cds.
JU326639 - TSA: Macaca mulatta Mamu_519955 mRNA sequence.
JU476758 - TSA: Macaca mulatta Mamu_370440 mRNA sequence.
EF486797 - Oryzias latipes Bloom syndrome helicase (BLM) mRNA, complete cds.
BT121073 - Lepeophtheirus salmonis Atlantic form clone lsaA-evv-504-124 Bleomycin hydrolase putative mRNA, complete cds.
AY889288 - Synthetic construct Homo sapiens clone FLH110467.01X bleomycin hydrolase (BLMH) mRNA, complete cds.
AY891776 - Synthetic construct Homo sapiens clone FLH110462.01L bleomycin hydrolase (BLMH) mRNA, partial cds.
JU321090 - TSA: Macaca mulatta Mamu_503411 mRNA sequence.
JU471838 - TSA: Macaca mulatta Mamu_371523 mRNA sequence.
JV047915 - TSA: Macaca mulatta Mamu_421455 mRNA sequence.

GeneReviews

BLM at chr15:90717346-90816166