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Gencode Genes

BEST3 (ENST00000330891.10) at chr12:69653609-69699303 - Homo sapiens bestrophin 3 (BEST3), transcript variant 1, mRNA. (from RefSeq NM_032735)
BEST3 (ENST00000553096.5) at chr12:69653819-69699285 - Homo sapiens bestrophin 3 (BEST3), transcript variant 3, mRNA. (from RefSeq NM_001282613)
BEST3 (ENST00000552295.5) at chr12:69671573-69694072 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8VZR0)
BEST3 (ENST00000551160.5) at chr12:69684408-69699395 - Homo sapiens bestrophin 3 (BEST3), transcript variant 6, mRNA. (from RefSeq NM_001282616)
BEST3 (ENST00000548658.1) at chr12:69677234-69699335 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8VR37)
BEST3 (ENST00000547208.5) at chr12:69643360-69699364 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt F8VVX2)
BEST3 (ENST00000533674.1) at chr12:69687259-69699344 - bestrophin 3 (from HGNC BEST3)
BEST3 (ENST00000529843.1) at chr12:69684365-69689211 - bestrophin 3 (from HGNC BEST3)
BEST3 (ENST00000488961.5) at chr12:69653609-69689276 - Homo sapiens bestrophin 3 (BEST3), transcript variant 2, mRNA. (from RefSeq NM_152439)
BEST3 (ENST00000476098.5) at chr12:69669679-69699351 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PNM2)
BEST3 (ENST00000331471.8) at chr12:69643554-69699361 - Homo sapiens bestrophin 3 (BEST3), transcript variant 4, mRNA. (from RefSeq NM_001282614)
BEST3 (ENST00000266661.8) at chr12:69683239-69699476 - Homo sapiens bestrophin 3 (BEST3), transcript variant 5, mRNA. (from RefSeq NM_001282615)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001282614.1 at chr12:69643508-69699416
NM_152439.3 at chr12:69653609-69689277
NM_032735.3 at chr12:69653609-69699303
NM_001282613.1 at chr12:69653609-69699416
NM_001282616.2 at chr12:69683239-69699303
NM_001282615.2 at chr12:69683239-69699303
NR_104220.1 at chr12:69683239-69689277

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011537965.2 at chr12:69652753-69676364
XM_011537962.2 at chr12:69652753-69689148
XM_011537961.1 at chr12:69652753-69697728
XM_011537963.1 at chr12:69652753-69697733

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

BEST3 at chr12:69653609-69699303

RefSeq Genes

BEST3 at chr12:69653609-69699416 - (NM_001282613) bestrophin-3 isoform 3
BEST3 at chr12:69643508-69699416 - (NM_001282614) bestrophin-3 isoform 4
BEST3 at chr12:69683241-69699303 - (NM_001282616) bestrophin-3 isoform 5
BEST3 at chr12:69653609-69689277 - (NM_152439) bestrophin-3 isoform 2
BEST3 at chr12:69683241-69699303 - (NM_001282615) bestrophin-3 isoform 5
BEST3 at chr12:69653609-69699303 - (NM_032735) bestrophin-3 isoform 1
BEST3 at chr12:69683241-69689277 - (NR_104220) 

Non-Human RefSeq Genes

best3 at chr12:69671427-69697798 - (NM_001161752) bestrophin-3
Best3 at chr12:69654913-69697798 - (NM_001191783) bestrophin-3
BEST3 at chr12:69671427-69697798 - (NM_001199669) bestrophin-3
Best3 at chr12:69654753-69699617 - (NM_001007583) bestrophin-3

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699303
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699303
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699303
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699303
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684408-69699395

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

BEST3 at chr12:69643360-69699364
BEST3 at chr12:69643554-69699361
BEST3 at chr12:69653609-69689276
BEST3 at chr12:69653609-69699416
BEST3 at chr12:69653819-69699285
BEST3 at chr12:69669679-69699351
BEST3 at chr12:69671573-69694072
BEST3 at chr12:69677234-69699335
BEST3 at chr12:69683239-69699476
BEST3 at chr12:69684365-69689211
BEST3 at chr12:69684408-69699395
BEST3 at chr12:69687259-69699344

International Knockout Mouse Consortium Genes Mapped to Human Genome

Best3_32962 at chr12:69653609-69699416
Best3_32963 at chr12:69653609-69699416
Best3_89193 at chr12:69653609-69699416
Best3_VG18756 at chr12:69653609-69699416

BC006440 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1733   99.6%         12     -  69683239  69699333  BC006440     1  1733  1815

Non-Human Aligned mRNA Search Results

BC148494 - Synthetic construct Mus musculus clone IMAGE:100015455, MGC:183307 bestrophin 3 (Best3) mRNA, encodes complete protein.
BC153087 - Synthetic construct Mus musculus clone IMAGE:100016367, MGC:184559 bestrophin 3 (Best3) mRNA, encodes complete protein.