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Gencode Genes

ARHGEF12 (ENST00000397843.7) at chr11:120336413-120489937 - Homo sapiens Rho guanine nucleotide exchange factor 12 (ARHGEF12), transcript variant 1, mRNA. (from RefSeq NM_015313)
ARHGEF12 (ENST00000612968.1) at chr11:120457051-120459339 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000532993.5) at chr11:120385294-120489034 - Homo sapiens Rho guanine nucleotide exchange factor 12 (ARHGEF12), transcript variant 3, mRNA. (from RefSeq NM_001301084)
ARHGEF12 (ENST00000532823.5) at chr11:120448494-120457752 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000531616.1) at chr11:120462549-120473127 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000530747.5) at chr11:120457718-120467308 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000530388.1) at chr11:120405933-120411837 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000529970.5) at chr11:120385321-120477646 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000528681.1) at chr11:120477000-120477573 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000528225.5) at chr11:120438448-120451633 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000526067.1) at chr11:120475975-120480107 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000525960.1) at chr11:120445422-120447266 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000525222.1) at chr11:120449275-120459194 - Rho guanine nucleotide exchange factor 12 (from HGNC ARHGEF12)
ARHGEF12 (ENST00000356641.7) at chr11:120336914-120487060 - Homo sapiens Rho guanine nucleotide exchange factor 12 (ARHGEF12), transcript variant 2, mRNA. (from RefSeq NM_001198665)
PLXNB1 (ENST00000296440.11) at chr3:48403854-48430086 - Homo sapiens plexin B1 (PLXNB1), transcript variant 2, mRNA. (from RefSeq NM_001130082)
PLXNB1 (ENST00000358536.8) at chr3:48403856-48429463 - Homo sapiens plexin B1 (PLXNB1), transcript variant 1, mRNA. (from RefSeq NM_002673)
PLXNB1 (ENST00000449094.5) at chr3:48413759-48424611 - Receptor for SEMA4D. Plays a role in RHOA activation and  subsequent changes of the actin cytoskeleton. Plays a role in axon  guidance, invasive growth and cell migration. (from UniProt O43157)
PLXNB1 (ENST00000456774.5) at chr3:48404486-48424611 - Receptor for SEMA4D. Plays a role in RHOA activation and  subsequent changes of the actin cytoskeleton. Plays a role in axon  guidance, invasive growth and cell migration. (from UniProt O43157)
GCSAM (ENST00000644247.1) at chr3_KZ559105v1_alt:6745-16541 - Involved in the negative regulation of lymphocyte  motility. It mediates the migration-inhibitory effects of IL6.  Serves as a positive regulator of the RhoA signaling pathway.  Enhancement of RhoA activation results in inhibition of lymphocyte  and lymphoma cell motility by activation of its downstream  effector ROCK. (from UniProt Q8N6F7)
GCSAM (ENST00000643065.1) at chr3_KZ559105v1_alt:6386-16544 - Involved in the negative regulation of lymphocyte  motility. It mediates the migration-inhibitory effects of IL6.  Serves as a positive regulator of the RhoA signaling pathway.  Enhancement of RhoA activation results in inhibition of lymphocyte  and lymphoma cell motility by activation of its downstream  effector ROCK. (from UniProt Q8N6F7)
GCSAM (ENST00000646639.2) at chr3_KZ559105v1_alt:4129-16538 - Involved in the negative regulation of lymphocyte  motility. It mediates the migration-inhibitory effects of IL6.  Serves as a positive regulator of the RhoA signaling pathway.  Enhancement of RhoA activation results in inhibition of lymphocyte  and lymphoma cell motility by activation of its downstream  effector ROCK. (from UniProt Q8N6F7)
GCSAM (ENST00000484193.5) at chr3:112123096-112133254 - Homo sapiens germinal center associated signaling and motility (GCSAM), transcript variant 3, mRNA. (from RefSeq NM_001190259)
GCSAM (ENST00000460387.6) at chr3:112123455-112133251 - Homo sapiens germinal center associated signaling and motility (GCSAM), transcript variant 4, mRNA. (from RefSeq NM_001190260)
GCSAM (ENST00000308910.9) at chr3:112120839-112133248 - Homo sapiens germinal center associated signaling and motility (GCSAM), transcript variant 1, mRNA. (from RefSeq NM_152785)
PLXNB2 (ENST00000449103.5) at chr22:50274979-50307627 - Cell surface receptor for SEMA4C, SEMA4D and SEMA4G that  plays an important role in cell-cell signaling. Binding to class 4  semaphorins promotes downstream activation of RHOA and  phosphorylation of ERBB2 at 'Tyr-1248'. Required for normal  differentiation and migration of neuronal cells during brain  corticogenesis and for normal embryonic brain development.  Regulates the migration of cerebellar granule cells in the  developing brain. Plays a role in RHOA activation and subsequent  changes of the actin cytoskeleton. Plays a role in axon guidance,  invasive growth and cell migration. May modulate the activity of  RAC1 and CDC42. Down-regulates macrophage migration in wound-  healing assays (in vitro) (By similarity). (from UniProt O15031)
PLXNB2 (ENST00000359337.9) at chr22:50274979-50307646 - Homo sapiens plexin B2 (PLXNB2), mRNA. (from RefSeq NM_012401)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001198665.2 at chr11:120336413-120489937
NM_015313.3 at chr11:120336413-120489937
NM_001301084.2 at chr11:120385327-120489937

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017017420.1 at chr11:120336276-120489034
XM_011542720.2 at chr11:120336369-120489034
XM_006718805.3 at chr11:120336550-120489034
XM_017017421.1 at chr11:120337287-120489034
XM_017017422.2 at chr11:120385293-120489034

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

ARHGEF12 at chr11:120336413-120489937

RefSeq Genes

ARHGEF12 at chr11:120385327-120489937 - (NM_001301084) rho guanine nucleotide exchange factor 12 isoform 3
ARHGEF12 at chr11:120336413-120489937 - (NM_015313) rho guanine nucleotide exchange factor 12 isoform 1
ARHGEF12 at chr11:120336413-120489937 - (NM_001198665) rho guanine nucleotide exchange factor 12 isoform 2

Non-Human RefSeq Genes

arhgef12 at chr11:120337237-120481312 - (NM_001079028) rho guanine nucleotide exchange factor 12
Arhgef12 at chr11:120337244-120485102 - (NM_001013246) rho guanine nucleotide exchange factor 12
ARHGEF12 at chr11:120337214-120488803 - (NM_001123033) rho guanine nucleotide exchange factor 12
Arhgef12 at chr11:120336706-120489032 - (NM_027144) rho guanine nucleotide exchange factor 12 isoform 1
Arhgef12 at chr11:120336706-120489032 - (NM_001359232) rho guanine nucleotide exchange factor 12 isoform 2
arhgef12.S at chr11:120337237-120488907 - (NM_001089294) Rho guanine nucleotide exchange factor 12 S homeolog

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

ARHGEF12 at chr11:120336413-120489937
ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

ARHGEF12 at chr11:120336413-120489937
ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ARHGEF12 at chr11:120336413-120489937
ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ARHGEF12 at chr11:120336413-120489937
ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ARHGEF12 at chr11:120336914-120487060
ARHGEF12 at chr11:120337078-120489936
ARHGEF12 at chr11:120385294-120489034
ARHGEF12 at chr11:120385321-120477646
ARHGEF12 at chr11:120405933-120411837
ARHGEF12 at chr11:120438448-120451633
ARHGEF12 at chr11:120445422-120447266
ARHGEF12 at chr11:120448494-120457752
ARHGEF12 at chr11:120449275-120459194
ARHGEF12 at chr11:120457051-120459339
ARHGEF12 at chr11:120457718-120467308
ARHGEF12 at chr11:120462549-120473127
ARHGEF12 at chr11:120475975-120480107
ARHGEF12 at chr11:120477000-120477573

International Knockout Mouse Consortium Genes Mapped to Human Genome

Arhgef12_35016 at chr11:120337237-120489936
Arhgef12_79236 at chr11:120337237-120489936
Arhgef12_VG16144 at chr11:120337237-120489936

BC063117 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2026   99.9%         11     + 120336909 120448359  BC063117     4  2029  2057

Non-Human Aligned mRNA Search Results

BC121927 - Xenopus tropicalis Rho guanine nucleotide exchange factor (GEF) 12, mRNA (cDNA clone MGC:146219 IMAGE:7687272), complete cds.
BC156558 - Synthetic construct Mus musculus clone IMAGE:100063207, MGC:191037 Rho guanine nucleotide exchange factor (GEF) 12 (Arhgef12) mRNA, encodes complete protein.
AY680472 - Macaca mulatta clone dl1_h12_t7_095 Rho guanine nucleotide exchange factor 12 (ARHGEF12) mRNA, 3' UTR.
JU326756 - TSA: Macaca mulatta Mamu_514376 mRNA sequence.
JV489090 - TSA: Macaca mulatta Mamu_61684 mRNA sequence.