Human hg19 ADAD1 UCSC Genome Browser v463

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UCSC Genes

ADAD1 (uc003iep.3) at chr4:123300595-123350947 - Homo sapiens adenosine deaminase domain containing 1 (testis-specific) (ADAD1), transcript variant 2, mRNA.
ADAD1 (uc003ieq.3) at chr4:123300595-123350947 - Homo sapiens adenosine deaminase domain containing 1 (testis-specific) (ADAD1), transcript variant 3, mRNA.
ADAD1 (uc003ieo.3) at chr4:123300121-123350947 - Homo sapiens adenosine deaminase domain containing 1 (testis-specific) (ADAD1), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_, NR_, NP_* or YP_*)

NM_139243.4 at chr4:123300166-123350939
NM_001159285.2 at chr4:123300673-123350939
NM_001159295.2 at chr4:123300673-123350939

RefSeq Genes

ADAD1 at chr4:123300673-123350939 - (NM_001159295) adenosine deaminase domain-containing protein 1 isoform 3
ADAD1 at chr4:123300673-123350939 - (NM_001159285) adenosine deaminase domain-containing protein 1 isoform 2
ADAD1 at chr4:123300166-123350939 - (NM_139243) adenosine deaminase domain-containing protein 1 isoform 1

Non-Human RefSeq Genes

ADAD1 at chr4:123300628-123350934 - (NM_001246556) adenosine deaminase domain-containing protein 1
adad1 at chr4:123301222-123350894 - (NM_001123473) adenosine deaminase domain-containing protein 1
Adad1 at chr4:123301216-123350903 - (NM_001006977) adenosine deaminase domain-containing protein 1
Adad1 at chr4:123301216-123350909 - (NM_009350) adenosine deaminase domain-containing protein 1
adad1.L at chr4:123301222-123350894 - (NM_001096430) adenosine deaminase domain-containing protein 1

Basic Gene Annotation Set from GENCODE Version 45lift37 (Ensembl 111)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 45lift37 (Ensembl 111)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 44lift37 (Ensembl 110)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 44lift37 (Ensembl 110)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 43lift37 (Ensembl 109)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 43lift37 (Ensembl 109)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 42lift37 (Ensembl 108)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 42lift37 (Ensembl 108)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 41lift37 (Ensembl 107)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 41lift37 (Ensembl 107)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 40lift37 (Ensembl 106)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 40lift37 (Ensembl 106)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 39lift37 (Ensembl 105)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 39lift37 (Ensembl 105)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 38lift37 (Ensembl 104)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 38lift37 (Ensembl 104)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 37lift37 (Ensembl 103)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 37lift37 (Ensembl 103)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Basic Gene Annotation Set from GENCODE Version 36lift37 (Ensembl 102)

ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939

Comprehensive Gene Annotation Set from GENCODE Version 36lift37 (Ensembl 102)

ADAD1 at chr4:123300121-123305061
ADAD1 at chr4:123300166-123350939
ADAD1 at chr4:123300183-123301337
ADAD1 at chr4:123300595-123317532
ADAD1 at chr4:123300598-123350957
ADAD1 at chr4:123300671-123350939
ADAD1 at chr4:123301474-123329104

Retroposed Genes V5, Including Pseudogenes

ADAD1_HUMAN at chr3:39327499-39329446 - (NM_001159295.1-3)
ADAD1 at chr3:39327499-39329446 - (NM_001159295.1-3)
ADAD1 at chr3:39327499-39329446 - (NM_001159295.1-3)
ADAD1 at chr18:47590163-47590900 - (NM_001159285.1-2)
ADAD1 at chr18:47590163-47590900 - (NM_001159285.1-2)
ADAD1_HUMAN at chr18:47590163-47590900 - (NM_001159285.1-2)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Adad1_36132 at chr4:123300121-123350947
Adad1_36133 at chr4:123300121-123350947
Adad1_36134 at chr4:123300121-123350947
Adad1_79164 at chr4:123300121-123350947
Adad1_90033 at chr4:123300121-123350947

BC040229 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.

 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1851  100.0%          4     + 123300649 123350947  BC040229     1  1851  1935

Non-Human Aligned mRNA Search Results

BC161180 - Xenopus tropicalis adenosine deaminase domain containing 1 (testis-specific), mRNA (cDNA clone MGC:185449 IMAGE:7860834), complete cds.
BC107346 - Mus musculus adenosine deaminase domain containing 1 (testis specific), mRNA (cDNA clone IMAGE:40055356), complete cds.
BC105906 - Rattus norvegicus adenosine deaminase domain containing 1 (testis specific), mRNA (cDNA clone MGC:124895 IMAGE:7453283), complete cds.
BC165984 - Synthetic construct Mus musculus clone IMAGE:100066284, MGC:195421 adenosine deaminase domain containing 1 (testis specific) (Adad1) mRNA, encodes complete protein.
BC102558 - Bos taurus adenosine deaminase domain containing 1 (testis-specific), mRNA (cDNA clone MGC:127993 IMAGE:7962973), complete cds.
BT081443 - Rana catesbeiana clone rcat-evr-539-053 Adenosine deaminase domain-containing protein 1 putative mRNA, complete cds.

Ensembl Genes

ADAD1 at chr4:123300671-123350939 - (ENST00000388725)
ADAD1 at chr4:123300595-123317532 - (ENST00000439307)
ADAD1 at chr4:123300168-123350939 - (ENST00000296513)
ADAD1P2 at chr18:47590165-47590810 - (ENST00000588476)
ADAD1 at chr4:123300121-123305061 - (ENST00000446706)
ADAD1 at chr4:123300183-123301337 - (ENST00000464160)
ADAD1 at chr4:123300598-123350957 - (ENST00000388724)
ADAD1 at chr4:123301474-123329104 - (ENST00000492454)

Vega Protein-Coding Annotations

OTTHUMT00000316458 at chr4:123300121-123305061
OTTHUMT00000316452 at chr4:123300168-123350939
OTTHUMT00000316457 at chr4:123300183-123301337
OTTHUMT00000316455 at chr4:123300595-123317532
OTTHUMT00000316453 at chr4:123300598-123350957
OTTHUMT00000316454 at chr4:123300671-123350939
OTTHUMT00000316456 at chr4:123301474-123329104

HUGO Gene Nomenclature

ADAD1 at chr4:123300167-123350939
ADAD1P1 at chr3:39328226-39329389
ADAD1P2 at chr18:47590163-47590856

gnomAD Loss of Function Metrics by Gene

ADAD1 at chr4:123300168-123350939

gnomAD Loss of Function Metrics by Transcript

ENST00000296513 at chr4:123300168-123350939
ENST00000388724 at chr4:123300598-123350957
ENST00000388725 at chr4:123300671-123350939
ENST00000439307 at chr4:123300595-123317532
ENST00000446706 at chr4:123300121-123305061