Schema for humanVidalP2P
  Database: hg19    Primary Table: humanVidalP2P    Row Count: 965,201   Data last updated: 2013-06-15
Format description: Distance between two genes in expression space.
On download server: MariaDB table dump directory
fieldexampleSQL type description
query uc004cwy.4varchar(255) Name of one gene
target uc004cwy.4varchar(255) Name of other gene
distance 0float Distance in expression space, always >= 0

Connected Tables and Joining Fields
        hg19.bioCycPathway.kgID (via humanVidalP2P.query)
      hg19.ccdsKgMap.geneId (via humanVidalP2P.query)
      hg19.ceBlastTab.query (via humanVidalP2P.query)
      hg19.dmBlastTab.query (via humanVidalP2P.query)
      hg19.drBlastTab.query (via humanVidalP2P.query)
      hg19.foldUtr3.name (via humanVidalP2P.query)
      hg19.foldUtr5.name (via humanVidalP2P.query)
      hg19.gnfAtlas2Distance.query (via humanVidalP2P.query)
      hg19.gnfAtlas2Distance.target (via humanVidalP2P.query)
      hg19.gnfU95Distance.query (via humanVidalP2P.query)
      hg19.gnfU95Distance.target (via humanVidalP2P.query)
      hg19.humanHprdP2P.query (via humanVidalP2P.query)
      hg19.humanHprdP2P.target (via humanVidalP2P.query)
      hg19.humanWankerP2P.query (via humanVidalP2P.query)
      hg19.humanWankerP2P.target (via humanVidalP2P.query)
      hg19.keggPathway.kgID (via humanVidalP2P.query)
      hg19.kgAlias.kgID (via humanVidalP2P.query)
      hg19.kgColor.kgID (via humanVidalP2P.query)
      hg19.kgProtAlias.kgID (via humanVidalP2P.query)
      hg19.kgProtMap2.qName (via humanVidalP2P.query)
      hg19.kgSpAlias.kgID (via humanVidalP2P.query)
      hg19.kgTargetAli.qName (via humanVidalP2P.query)
      hg19.kgTxInfo.name (via humanVidalP2P.query)
      hg19.kgXref.kgID (via humanVidalP2P.query)
      hg19.knownBlastTab.query (via humanVidalP2P.query)
      hg19.knownBlastTab.target (via humanVidalP2P.query)
      hg19.knownCanonical.transcript (via humanVidalP2P.query)
      hg19.knownGene.name (via humanVidalP2P.query)
      hg19.knownGeneMrna.name (via humanVidalP2P.query)
      hg19.knownGenePep.name (via humanVidalP2P.query)
      hg19.knownGeneTxMrna.name (via humanVidalP2P.query)
      hg19.knownGeneTxPep.name (via humanVidalP2P.query)
      hg19.knownIsoforms.transcript (via humanVidalP2P.query)
      hg19.knownToAllenBrain.name (via humanVidalP2P.query)
      hg19.knownToEnsembl.name (via humanVidalP2P.query)
      hg19.knownToGnfAtlas2.name (via humanVidalP2P.query)
      hg19.knownToHInv.name (via humanVidalP2P.query)
      hg19.knownToHprd.name (via humanVidalP2P.query)
      hg19.knownToKeggEntrez.name (via humanVidalP2P.query)
      hg19.knownToLocusLink.name (via humanVidalP2P.query)
      hg19.knownToLynx.name (via humanVidalP2P.query)
      hg19.knownToMupit.name (via humanVidalP2P.query)
      hg19.knownToNextProt.name (via humanVidalP2P.query)
      hg19.knownToPfam.name (via humanVidalP2P.query)
      hg19.knownToRefSeq.name (via humanVidalP2P.query)
      hg19.knownToSuper.gene (via humanVidalP2P.query)
      hg19.knownToTreefam.name (via humanVidalP2P.query)
      hg19.knownToU133.name (via humanVidalP2P.query)
      hg19.knownToU133Plus2.name (via humanVidalP2P.query)
      hg19.knownToU95.name (via humanVidalP2P.query)
      hg19.knownToVisiGene.name (via humanVidalP2P.query)
      hg19.knownToWikipedia.name (via humanVidalP2P.query)
      hg19.mmBlastTab.query (via humanVidalP2P.query)
      hg19.rnBlastTab.query (via humanVidalP2P.query)
      hg19.scBlastTab.query (via humanVidalP2P.query)
      hg19.ucscScop.ucscId (via humanVidalP2P.query)
      knownGeneV39.bioCycPathway.kgID (via humanVidalP2P.query)
      knownGeneV39.ceBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.dmBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.drBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.foldUtr3.name (via humanVidalP2P.query)
      knownGeneV39.foldUtr5.name (via humanVidalP2P.query)
      knownGeneV39.gnfAtlas2Distance.query (via humanVidalP2P.query)
      knownGeneV39.gnfAtlas2Distance.target (via humanVidalP2P.query)
      knownGeneV39.kgAlias.kgID (via humanVidalP2P.query)
      knownGeneV39.kgColor.kgID (via humanVidalP2P.query)
      knownGeneV39.kgProtAlias.kgID (via humanVidalP2P.query)
      knownGeneV39.kgSpAlias.kgID (via humanVidalP2P.query)
      knownGeneV39.kgTargetAli.qName (via humanVidalP2P.query)
      knownGeneV39.kgXref.kgID (via humanVidalP2P.query)
      knownGeneV39.knownAttrs.kgID (via humanVidalP2P.query)
      knownGeneV39.knownBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.knownBlastTab.target (via humanVidalP2P.query)
      knownGeneV39.knownCanonical.protein (via humanVidalP2P.query)
      knownGeneV39.knownCanonical.transcript (via humanVidalP2P.query)
      knownGeneV39.knownCds.name (via humanVidalP2P.query)
      knownGeneV39.knownGene.name (via humanVidalP2P.query)
      knownGeneV39.knownGeneMrna.name (via humanVidalP2P.query)
      knownGeneV39.knownGenePep.name (via humanVidalP2P.query)
      knownGeneV39.knownIsoforms.transcript (via humanVidalP2P.query)
      knownGeneV39.knownToEnsembl.name (via humanVidalP2P.query)
      knownGeneV39.knownToGnfAtlas2.name (via humanVidalP2P.query)
      knownGeneV39.knownToHprd.name (via humanVidalP2P.query)
      knownGeneV39.knownToLocusLink.name (via humanVidalP2P.query)
      knownGeneV39.knownToMrna.name (via humanVidalP2P.query)
      knownGeneV39.knownToMrnaSingle.name (via humanVidalP2P.query)
      knownGeneV39.knownToMupit.name (via humanVidalP2P.query)
      knownGeneV39.knownToPfam.name (via humanVidalP2P.query)
      knownGeneV39.knownToRefSeq.name (via humanVidalP2P.query)
      knownGeneV39.knownToSuper.gene (via humanVidalP2P.query)
      knownGeneV39.knownToTag.name (via humanVidalP2P.query)
      knownGeneV39.knownToU133.name (via humanVidalP2P.query)
      knownGeneV39.knownToU95.name (via humanVidalP2P.query)
      knownGeneV39.knownToVisiGene.name (via humanVidalP2P.query)
      knownGeneV39.knownToWikipedia.name (via humanVidalP2P.query)
      knownGeneV39.mmBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.rnBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.scBlastTab.query (via humanVidalP2P.query)
      knownGeneV39.ucscScop.ucscId (via humanVidalP2P.query)

Sample Rows
 
querytargetdistance
uc004cwy.4uc004cwy.40
uc004cwy.4uc004cwx.40
uc004cwx.4uc004cwy.40
uc004cwx.4uc004cwx.40
uc004cwy.4uc003mkc.21
uc004cwy.4uc003mkb.21
uc004cwy.4uc003mka.21
uc004cwx.4uc003mkc.21
uc004cwx.4uc003mkb.21
uc004cwx.4uc003mka.21

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.