Public Sessions
 

Sessions allow users to save snapshots of the Genome Browser and its current configuration, including displayed tracks, position, and custom track data. The Public Sessions tool allows users to easily share those sessions that they deem interesting with the rest of the world's researchers. You can add your own sessions to this list by checking the appropriate box on the Session Management page.

See the Sessions User's Guide for more information.

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Screenshot Session Properties Creation Date Use Count
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Description:
Author: dolphinboy666
Session Name: hg38_AR_H3K27Ac_Med1_VCAP
Genome Assembly: hg38
Creation Date: 2020-09-03
Views: 9
1599087600 9
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Description:
Author: dolphinboy666
Session Name: hg38_AR
Genome Assembly: hg38
Creation Date: 2020-09-03
Views: 14
1599087600 14
Description:
Author: Tore
Session Name: PRDM14/NANOG overexpression
Genome Assembly: mm10
Creation Date: 2020-07-07
Views: 28
1594076400 28
Description:
Author: Tore
Session Name: Comparison of the pluripotent stages
Genome Assembly: mm10
Creation Date: 2020-07-07
Views: 34
1594076400 34
Description:
Author: Tore
Session Name: H3K4me1/2 deficiency and Otx2-/-
Genome Assembly: mm10
Creation Date: 2020-07-07
Views: 21
1594076400 21
Description:
Author: otnyukov
Session Name: mm10
Genome Assembly: mm10
Creation Date: 2020-05-18
Views: 41
1589756400 41
Description:
Author: dilipdurai
Session Name: hg38AZ
Genome Assembly: hg38
Creation Date: 2020-04-26
Views: 41
1587855600 41
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Description:
Author: ltoker
Session Name: H3K27ChIP_PD
Genome Assembly: hg19
Creation Date: 2020-04-12
Views: 30
1586646000 30
Description: Capture kit and bait sets from Clinical Genomics Stockholm https://github.com/Clinical-Genomics/target_capture_bed
Author: hassanfa
Session Name: Clinical Genomics Gene Panels
Genome Assembly: hg19
Creation Date: 2019-09-16
Views: 121
1568588400 121
Description:
Author: giancarlo.castellano
Session Name: Drip-seq-27032020
Genome Assembly: hg19
Creation Date: 2020-03-27
Views: 59
1585263600 59
Description:
Author: vdr
Session Name: danRer7_4Cseq_nog2
Genome Assembly: danRer7
Creation Date: 2020-02-29
Views: 42
1582930800 42
Description:
Author: Khadija Sana
Session Name: Anril
Genome Assembly: hg19
Creation Date: 2020-02-25
Views: 54
1582585200 54
Description:
Author: ilasa.5
Session Name: Genomics day 2
Genome Assembly: hg38
Creation Date: 2020-02-11
Views: 38
1581375600 38
Description:
Author: Mirian
Session Name: genomics day 2
Genome Assembly: hg38
Creation Date: 2020-02-11
Views: 38
1581375600 38
Description:
Author: mariolamunarriz
Session Name: genomics day 2
Genome Assembly: hg38
Creation Date: 2020-02-11
Views: 47
1581375600 47
Description:
Author: vdr
Session Name: hg38_PC_JT_2
Genome Assembly: hg38
Creation Date: 2019-11-12
Views: 57
1573513200 57
Description: ReMap 2020: An atlas of regulatory regions from an integrative analysis of Human and Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info.
Author: Benoit Ballester
Session Name: EU_hg38_ReMap2020
Genome Assembly: hg38
Creation Date: 2019-09-04
Views: 502
1567551600 502
Description:
Author: colm.nestor@liu.se
Session Name: MGGT - MeDIP Lab 2019
Genome Assembly: mm9
Creation Date: 2019-11-26
Views: 119
1574722800 119
Description: AMPH/WT Pancreas differential methylation (RRBS)
Author: EugOT
Session Name: AMPHpanDifMeth
Genome Assembly: mm10
Creation Date: 2019-10-22
Views: 118
1571698800 118
Description:
Author: afanas
Session Name: TIM3 guides vs repeats
Genome Assembly: mm10
Creation Date: 2019-10-01
Views: 139
1569884400 139
Description:
Author: Ccohen
Session Name: NOS2
Genome Assembly: hg19
Creation Date: 2019-09-25
Views: 62
1569366000 62
Description: ReMap 2020: An atlas of regulatory regions from an integrative analysis of Arabidopsis thaliana DNA-binding sequencing experiments. Go to ReMap for more info.
Author: Benoit Ballester
Session Name: EU_araTha1_ReMap2020
Genome Assembly: hub_30910_araTha1
Creation Date: 2019-10-16
Views: 180
1571180400 180
Description:
Author: QAtester2
Session Name: mm9.something
Genome Assembly: mm9
Creation Date: 2019-07-31
Views: 49
1564527600 49
Description:
Author: rvelde
Session Name: testChipSeq
Genome Assembly: hg38
Creation Date: 2019-03-20
Views: 47
1553036400 47
Description:
Author: Example
Session Name: hg19_wobble
Genome Assembly: hg19
Creation Date: 2019-03-04
Views: 57
1551654000 57
Description:
Author: nikomari
Session Name: chr6_NM
Genome Assembly: hg19
Creation Date: 2019-03-03
Views: 55
1551567600 55
Description:
Author: nikomari
Session Name: hg19_NM_FGFR1
Genome Assembly: hg19
Creation Date: 2019-03-03
Views: 59
1551567600 59
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Description:
Author: mridley
Session Name: hg38-monocyte macrophage
Genome Assembly: hg38
Creation Date: 2016-10-01
Views: 58
1475276400 58
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Description:
Author: QAtester3
Session Name: genome-euro
Genome Assembly: hub_24394_linHum0
Creation Date: 2018-12-21
Views: 69
1545346800 69
Description:
Author: mcatoni
Session Name: Pack-CACTA
Genome Assembly: hub_21716_araTha1
Creation Date: 2018-10-02
Views: 63
1538434800 63
Description:
Author: mahogny
Session Name: th2crispr_human
Genome Assembly: hg38
Creation Date: 2018-09-19
Views: 160
1537311600 160
Description:
Author: mahogny
Session Name: th2crispr_OE
Genome Assembly: mm10
Creation Date: 2018-09-19
Views: 98
1537311600 98
Description:
Author: kpaschos
Session Name: BMI1-SUZ12
Genome Assembly: hg19
Creation Date: 2018-09-15
Views: 71
1536966000 71
Description:
Author: Dos Santos Matthieu
Session Name: ChipseqMuscle lent vs rapide
Genome Assembly: mm10
Creation Date: 2018-09-24
Views: 46
1537743600 46
Description:
Author: ilasa.5
Session Name: Day 3 2nd exercise group 5
Genome Assembly: hg19
Creation Date: 2020-02-12
Views: 34
1581462000 34
Description:
Author: petersvensson
Session Name: hub_12832_spo2
Genome Assembly: hub_12832_spo2
Creation Date: 2018-07-17
Views: 80
1531782000 80
Description:
Author: amanchenoferris
Session Name: bohere_etal
Genome Assembly: dm6
Creation Date: 2018-10-18
Views: 61
1539817200 61
Description:
Author: Mridley
Session Name: hg38-blueprint tcell2
Genome Assembly: hg38
Creation Date: 2018-05-14
Views: 54
1526252400 54
Description:
Author: Tung
Session Name: b1_promoters
Genome Assembly: hg38
Creation Date: 2018-04-25
Views: 76
1524610800 76
Description:
Author: s.knop
Session Name: SESSION 1
Genome Assembly: hg19
Creation Date: 2018-03-01
Views: 69
1519858800 69
Description:
Author: hilasha
Session Name: CATCH BRCA1
Genome Assembly: hg38
Creation Date: 2018-02-26
Views: 177
1519599600 177
Description: ReMap 2018: An atlas of regulatory regions from an integrative analysis of Human DNA-binding sequencing experiments. Go to ReMap for more info. ReMap 2018 paper.
Author: Benoit Ballester
Session Name: hg38_ReMap2018
Genome Assembly: hg38
Creation Date: 2017-08-10
Views: 1134
1502319600 1134
Description: Educational: evolution. Dog chr6 showing cat synteny -- no major rearrangements between the two closely related animals. Rat and mouse, however, both show many rearrangements (different colors) relative to dog and cat, but the breakpoints are the same -- showing that mouse and rat are closely related to each other.
Author: Example
Session Name: canFam3_catRatMouse
Genome Assembly: canFam3
Creation Date: 2017-11-01
Views: 75
1509490800 75
Description:
Author: Grunewald
Session Name: hg19_chr7_NAMPT_locus
Genome Assembly: hg19
Creation Date: 2017-09-19
Views: 62
1505775600 62
Description:
Author: chardman
Session Name: Dengue seq
Genome Assembly: hg38
Creation Date: 2017-07-28
Views: 82
1501196400 82
Description:
Author: hilasha
Session Name: methylation OM
Genome Assembly: hg19
Creation Date: 2018-05-07
Views: 79
1525647600 79
Description:
Author: krebsarnaud
Session Name: Hartl_et_al_retina_2017
Genome Assembly: mm9
Creation Date: 2017-07-26
Views: 195
1501023600 195
Description:
Author: vsabine
Session Name: allibs_928_925
Genome Assembly: sacCer3
Creation Date: 2018-11-12
Views: 63
1541977200 63
Description:
Author: Mridley
Session Name: hg19-corces
Genome Assembly: hg19
Creation Date: 2017-07-13
Views: 212
1499900400 212
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Description:
Author: anah
Session Name: forpicsTADsjan
Genome Assembly: hg19
Creation Date: 2017-01-24
Views: 81
1485212400 81
Screenshot not available
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Description:
Author: musomilan
Session Name: ARL15 locus and SNPs
Genome Assembly: hg19
Creation Date: 2016-11-17
Views: 110
1479337200 110
Description:
Author: Mridley
Session Name: T cell-2
Genome Assembly: hg38
Creation Date: 2016-10-01
Views: 65
1475276400 65
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Description:
Author: hs451
Session Name: Codex hg19
Genome Assembly: hg19
Creation Date: 2016-09-01
Views: 78
1472684400 78
Description:
Author: mspeir
Session Name: hg19_CAGrepeat
Genome Assembly: hg19
Creation Date: 2016-06-20
Views: 82
1466377200 82
Description:
Author: mspeir
Session Name: hg19_wobble
Genome Assembly: hg19
Creation Date: 2016-06-20
Views: 135
1466377200 135
Description: Session displays the promoter region of DARC on human assembly hg19 including UCSC Genes, dbSNP 146 (Common subset) and the Publications track showing sequences and SNPs text-mined from PubMed Central and Elsevier. Adapted from Figure 1 in Meyer, et al. The UCSC Genome Browser database: extensions and updates 2013. Nucleic Acids Res. 2013 Jan;41(Database issue):D64-9: http://nar.oxfordjournals.org/content/41/D1/D64.long.
Author: mspeir
Session Name: hg19_NAR_2013_Fig1
Genome Assembly: hg19
Creation Date: 2016-06-20
Views: 82
1466377200 82
Description: Session displays the promoter region and transcription start of IRF1 on human assembly hg19 showing UCSC Genes, 1000 Genomes Phase 3 Integrated Variant Calls in the haplotype sorting VCF display mode, histone mark H3K27Ac binding in overlays of 7 ENCODE cell lines and PhyloP conservation scores from alignments of 100 vertebrates. Adapted from Figure 2 in Meyer, et al. The UCSC Genome Browser database: extensions and updates 2013. Nucleic Acids Res. 2013 Jan;41(Database issue):D64-9: http://nar.oxfordjournals.org/content/41/D1/D64.long.
Author: mspeir
Session Name: hg19_NAR_2013_Fig2
Genome Assembly: hg19
Creation Date: 2016-06-20
Views: 82
1466377200 82
Description: Session displays the dyskeratosis congenita 1 (DKC1) gene using the exon-only multi-region mode in the human assembly hg38. Alongside the gene structure, tracks displaying dbSNP "flagged" variants, OMIM clinical variants, ENCODE transcription levels from 9 cell lines, a 100-way vertebrate alignment (only a subset of species displayed), and conservation scores calculated using phyloP across this 100-way alignment.
Author: mspeir
Session Name: hg38_DKC1_SNPs_Cons_Transcription
Genome Assembly: hg38
Creation Date: 2016-06-20
Views: 98
1466377200 98
Description: This session is demonstrating the exon-only mode of the multi-region feature. The exon-only mode uses the GENCODE v22 track to slice up the normal display and remove both intronic and intergenic regions from the display. Only those regions covered by exons, both coding and noncoding, are left in the display. For more on the multi-region display see the user guide: http://genome.ucsc.edu/goldenPath/help/multiRegionHelp.html.
Author: mspeir
Session Name: hg38_exonOnlyExample
Genome Assembly: hg38
Creation Date: 2016-06-20
Views: 100
1466377200 100
Description: This session displays a region of the LHX6 gene that highlights a selection of the new tracks added in the previous year for the hg38/GRCh38 human assembly. The tracks shown in this display (from top to bottom) include GENCODE Genes V22, transcription levels assayed across 9 ENCODE cell lines, DNase hypersensitive regions based on data from 95 ENCODE cell lines, genome-wide conservation scores calculated using phastCons, a multiple genome alignment created using Lastz and Multiz, and pathogenic CNVs from the ClinGen database. Adapted from Figure 1 in Speir, et al. The UCSC Genome Browser database: 2016 update. Nucleic Acids Res. 2016 Jan 4;44(D1):D717-25: http://nar.oxfordjournals.org/content/44/D1/D717.full
Author: mspeir
Session Name: hg38_NAR_2016_Fig1
Genome Assembly: hg38
Creation Date: 2016-06-20
Views: 101
1466377200 101
Description: Session highlights a mouse-specific repeat on chromosome 12. You can see the gap in the 60-way vertebrate alignment surrounding the repeat, which is highlighted in light blue. The repeat is classified as a LINE and is part of the L1 family of repeats. Additionally, on the far right-hand side of the display, you can see the retrotransposed Bf3 gene.
Author: mspeir
Session Name: mm10_MouseSpecificRepeat_plus_RetroposedGene
Genome Assembly: mm10
Creation Date: 2016-06-20
Views: 76
1466377200 76
Description: This session demonstrates the GTEx track on the human assembly hg19. The GTEx track shows data from the NIH Genotype-Tissue Expression project and displays expression data for each gene, based on GENCODE gene models, from 51 tissues collected from 570 individual. This session also demonstrates the gene-only mode of the multi-region feature, which removes intergenic regions from the display.
Author: mspeir
Session Name: hg19_gtexAnnouncement
Genome Assembly: hg19
Creation Date: 2016-06-24
Views: 112
1466722800 112
Description:
Author: GeMi
Session Name: ALPL analysis
Genome Assembly: hg19
Creation Date: 2017-07-19
Views: 89
1500418800 89
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Description:
Author: maxvcg
Session Name: Es serum vs 2i (mm9)
Genome Assembly: mm9
Creation Date: 2013-03-25
Views: 142
1364166000 142