UCSC Rat Gene Sorter

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UCSC Rat Gene Sorter

genome assembly search

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#

Name

RGD Gene

BLASTP
E-Value

Genome Position

Description

chr6 128,010,168

exhibits protein binding and serine-type endopeptidase inhibitor activity; involved in acute-phase response (inferred)

n/a

chr1 163,323,263

a heme binding globulin protein

n/a

chr7 139,879,135

may play a role in TGF-beta mediated transmembrane signaling in blood vessels

n/a

chr15 35,196,790

serine proteinase associated with cytotoxic T lymphocytes and NK cell induced apoptosis

n/a

chr19 52,173,635

mitochondrial protein that may be involved in gluconeogenesis and ureagenesis

n/a

catalyzes the hydrolysis of extracellular nucleotides; may regulate nucleotide mediated signaling

n/a

encodes a member of the metalloproteinase family involved in female pregnancy, wound healing, and several other biological processes; associated with aortic aneurysm, liver cirrhosis, dermatitis, allergic contact and other diseases

n/a

chr7 12,193,152

member of the olfactory receptor family

n/a

chr1 187,004,050

Interleukin-6 family cytokine with hypertrophic and protective effects in cardiac cells; also a neurotrophic factor

n/a

chr13 64,208,272

encodes a calcium-dependent phospholipase A2 involved in regulation of apoptosis, bone mineralization, inflammatory response, and other processes; associated with asthma, fever, bladder cancer, and other diseases

n/a

chr12 36,811,391

plays a role in interferon-induced antiviral response

n/a

n/a

chr14 19,066,320

secreted protein in the serum that fulfills ligand-carrier functions at late stages of development

n/a

chr8 114,031,538

has both fructose-2,6-bisphosphate 2-phosphatase and 6-phosphofructo-2-kinase activities; plays a role in fructose 2,6 bisphosphate metabolism and regulation of glycolysis

n/a

chr10 4,813,910

may play a role in spermatogenesis

n/a

chr7 139,934,448

a protein exhibiting receptor signaling protein serine/threonine kinase activity; activin receptor activity, type I; SMAD binding and other functions (human, mouse orthologs); involved in positive regulation of pathway-restricted SMAD protein phosphorylation, positive regulation of transcription from RNA polymerase II promoter, central nervous system development and other processes; found in activin receptor complex; associated with Myocardial Ischemia, Pancreatic Neoplasms; part of activin signaling pathway

n/a

chr7 11,554,920

mediates the rolling and sticking of lymphocytes to the high endothelial venule (HEV) of the Peyers patch

n/a

chr9 11,007,484

nucleoside transporter

n/a

chr18 31,795,966

may play a role in neurite outgrowth; may regulate cell differentiation in the nervous system; may act in synergy with fibronectin to enhance neuronal cell adhesion

n/a

chr1 200,002,404

member of the olfactory receptor family

n/a

chr15 48,208,332

may become associated with or modify the mature sperm membrane

n/a

chr16 9,916,718

n/a

chr2 181,401,561

encodes a membrane bound, glycosylated protein belonging to the mucin family; involved in female pregnancy, response to hypoxia, response to retinoic acid; associated with Cholangiocarcinoma; human homolog associated with many cancers

n/a

chr15 23,358,355

n/a

chr10 34,922,262

predicted member of the olfactory receptor family

n/a

chr10 34,941,241

member of the olfactory receptor family

n/a

chr2 180,056,427

intermediate filament protein specifically expressed in neuroepithelial stem cells; may play a role in neural cell differentiation

n/a

chr17 50,339,264

n/a

chr7 111,405,910

a nucleotide receptor and may be a homolog of the human pyrimidinoceptor

n/a

chr6 122,875,500

protein tyrosine phosphatase with similarity to the band 4.1 family of cytoskeleton-associated proteins; may play a role in cytoskeletal organization

n/a

chr18 57,177,651

sulfate transporter; may be involved in endochondral bone formation

n/a

n/a

chr7 140,977,700

mediates adhesion to mucosal addressin cell adhesion molecule-1 (MAdCAM-1)

n/a

chr3 68,657,884

predicted member of the olfactory receptor family

n/a

chr10 43,424,649

basic Helix-Loop-Helix (bHLH) transcription factor; essential for normal cardiac and extraembryonic development

n/a

chr3 143,258,016

kinase; phosphorylates a serine in the N-terminus of a myosin light chain

n/a

chr8 70,553,022

n/a

chr1 157,471,811

n/a

chr13 78,995,265

binds the collagen I alpha 1 and the osteocalcin promoters; acts as a negative regulator of transcription

n/a

chr2 88,110,706

catalyzes hydration of carbon dioxide; may be involved in cellular response to oxidative stress

n/a

chr8 83,113,661

may be involved in promoting meiosis during spermatogenesis

n/a

chr12 15,317,778

regulates NGF-promoted neurite outgrowth and neuronal differentiation

n/a

chr10 11,951,763

member of the olfactory receptor family

n/a

chr5 62,906,614

transcription factor responsible for the development of a negative controller of thyroid-specific gene expression

n/a

chr8 127,800,975

may act as an androgen-regulated transglutaminase

n/a

chr3 74,612,770

predicted member of the olfactory receptor family

n/a

human homolog catalyzes the interconversion of the alpha- and beta-anomeric configurations of hexose sugars including glucose and galactose

n/a

chr6 108,506,097

catalyzes the irreversible oxidative decarboxylation of malonate- and methylmalonate-semialdehydes to acetyl- and propionyl-CoA, respectively in the distal portions of the valine and pyrimidine catabolic pathways; also has esterase activity, hydrolyzes p-nitrophenyl acetate

n/a

chr20 2,125,367

may play a role in antigen presentation

n/a

acts as a redox regulated transcriptional activator